1
1
openmpi/ompi/mca/coll/libnbc/nbc_ibcast.c
Torsten Hoefler 6b22641669 added LibNBC (http://www.unixer.de/NBC) as collv1 (blocking) component.
I know it does not make much sense but one can play around with the
performance. Numbers are available at http://www.unixer.de/research/nbcoll/perf/.
This is the first step towards collv2. Next step includes the addition
of non-blocking functions to the MPI-Layer and the collv1 interface.

It implements all MPI-1 collective algorithms in a non-blocking manner.
However, the collv1 interface does not allow non-blocking collectives so
that all collectives are used blocking by the ompi-glue layer.

I wanted to add LibNBC as a separate subdirectory, but I could not
convince the buildsystem (and had not the time). So the component looks
pretty messy. It would be great if somebody could explain me how to move
all nbc*{c,h}, and {hb,dict}*{c,h} to a seperate subdirectory.

It's .ompi_ignored because I did not test it exhaustively yet.

This commit was SVN r11401.
2006-08-24 16:47:18 +00:00

235 строки
8.0 KiB
C

#include "nbc.h"
static __inline__ int bcast_sched_binomial(int rank, int p, int root, NBC_Schedule *schedule, void *buffer, int count, MPI_Datatype datatype);
static __inline__ int bcast_sched_linear(int rank, int p, int root, NBC_Schedule *schedule, void *buffer, int count, MPI_Datatype datatype);
static __inline__ int bcast_sched_chain(int rank, int p, int root, NBC_Schedule *schedule, void *buffer, int count, MPI_Datatype datatype, int fragsize, int size);
#ifdef NBC_CACHE_SCHEDULE
/* tree comparison function for schedule cache */
int NBC_Bcast_args_compare(NBC_Bcast_args *a, NBC_Bcast_args *b, void *param) {
if( (a->buffer == b->buffer) &&
(a->count == b->count) &&
(a->datatype == b->datatype) &&
(a->root == b->root) ) {
return 0;
}
if( a->buffer < b->buffer ) {
return -1;
}
return +1;
}
#endif
int NBC_Ibcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm, NBC_Handle* handle) {
int rank, p, res, size, segsize;
NBC_Schedule *schedule;
#ifdef NBC_CACHE_SCHEDULE
NBC_Bcast_args *args, *found, search;
#endif
enum { NBC_BCAST_LINEAR, NBC_BCAST_BINOMIAL, NBC_BCAST_CHAIN } alg;
res = NBC_Init_handle(handle, comm);
if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; }
res = MPI_Comm_rank(comm, &rank);
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; }
res = MPI_Comm_size(comm, &p);
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; }
res = MPI_Type_size(datatype, &size);
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_size() (%i)\n", res); return res; }
/* algorithm selection */
if(p <= 4) {
alg = NBC_BCAST_LINEAR;
} else if(size*count < 65536) {
alg = NBC_BCAST_BINOMIAL;
} else if(size*count < 524288) {
alg = NBC_BCAST_CHAIN;
segsize = 16384/2;
} else {
alg = NBC_BCAST_CHAIN;
segsize = 65536/2;
}
handle->tmpbuf=NULL;
#ifdef NBC_CACHE_SCHEDULE
/* search schedule in communicator specific tree */
search.buffer=buffer;
search.count=count;
search.datatype=datatype;
search.root=root;
found = hb_tree_search(handle->comminfo->NBC_Dict[NBC_BCAST], &search);
if(found == NULL) {
#endif
schedule = malloc(sizeof(NBC_Schedule));
res = NBC_Sched_create(schedule);
if(res != NBC_OK) { printf("Error in NBC_Sched_create, res = %i\n", res); return res; }
switch(alg) {
case NBC_BCAST_LINEAR:
res = bcast_sched_linear(rank, p, root, schedule, buffer, count, datatype);
break;
case NBC_BCAST_BINOMIAL:
res = bcast_sched_binomial(rank, p, root, schedule, buffer, count, datatype);
break;
case NBC_BCAST_CHAIN:
res = bcast_sched_chain(rank, p, root, schedule, buffer, count, datatype, segsize, size);
break;
}
if (NBC_OK != res) { printf("Error in Schedule creation() (%i)\n", res); return res; }
res = NBC_Sched_commit(schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_commit() (%i)\n", res); return res; }
#ifdef NBC_CACHE_SCHEDULE
/* save schedule to tree */
args = malloc(sizeof(NBC_Bcast_args));
args->buffer=buffer;
args->count=count;
args->datatype=datatype;
args->root=root;
args->schedule=schedule;
res = hb_tree_insert (handle->comminfo->NBC_Dict[NBC_BCAST], args, args, 0);
if(res != 0) printf("error in dict_insert() (%i)\n", res);
/* increase number of elements for A2A */
if(++handle->comminfo->NBC_Dict_size[NBC_BCAST] > SCHED_DICT_UPPER) {
NBC_SchedCache_dictwipe(handle->comminfo->NBC_Dict[NBC_BCAST], &handle->comminfo->NBC_Dict_size[NBC_BCAST]);
}
} else {
/* found schedule */
schedule=found->schedule;
}
#endif
res = NBC_Start(handle, schedule);
if (NBC_OK != res) { printf("Error in NBC_Start() (%i)\n", res); return res; }
return NBC_OK;
}
/* better binomial bcast
* working principle:
* - each node gets a virtual rank vrank
* - the 'root' node get vrank 0
* - node 0 gets the vrank of the 'root'
* - all other ranks stay identical (they do not matter)
*
* Algorithm:
* - each node with vrank > 2^r and vrank < 2^r+1 receives from node
* vrank - 2^r (vrank=1 receives from 0, vrank 0 receives never)
* - each node sends each round r to node vrank + 2^r
* - a node stops to send if 2^r > commsize
*/
#define RANK2VRANK(rank, vrank, root) \
{ \
vrank = rank; \
if (rank == 0) vrank = root; \
if (rank == root) vrank = 0; \
}
#define VRANK2RANK(rank, vrank, root) \
{ \
rank = vrank; \
if (vrank == 0) rank = root; \
if (vrank == root) rank = 0; \
}
static __inline__ int bcast_sched_binomial(int rank, int p, int root, NBC_Schedule *schedule, void *buffer, int count, MPI_Datatype datatype) {
int maxr, vrank, peer, r, res;
maxr = (int)ceil((log(p)/LOG2));
RANK2VRANK(rank, vrank, root);
/* receive from the right hosts */
if(vrank != 0) {
for(r=0; r<maxr; r++) {
if((vrank >= (1<<r)) && (vrank < (1<<(r+1)))) {
VRANK2RANK(peer, vrank-(1<<r), root);
res = NBC_Sched_recv(buffer, false, count, datatype, peer, schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
}
}
res = NBC_Sched_barrier(schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; }
}
/* now send to the right hosts */
for(r=0; r<maxr; r++) {
if(((vrank + (1<<r) < p) && (vrank < (1<<r))) || (vrank == 0)) {
VRANK2RANK(peer, vrank+(1<<r), root);
res = NBC_Sched_send(buffer, false, count, datatype, peer, schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
}
}
return NBC_OK;
}
/* simple linear MPI_Ibcast */
static __inline__ int bcast_sched_linear(int rank, int p, int root, NBC_Schedule *schedule, void *buffer, int count, MPI_Datatype datatype) {
int peer, res;
/* send to all others */
if(rank == root) {
for (peer=0; peer<p;peer++) {
if(peer != root) {
/* send msg to peer */
res = NBC_Sched_send(buffer, false, count, datatype, peer, schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
}
}
} else {
/* recv msg from root */
res = NBC_Sched_recv(buffer, false, count, datatype, root, schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
}
return NBC_OK;
}
/* simple chained MPI_Ibcast */
static __inline__ int bcast_sched_chain(int rank, int p, int root, NBC_Schedule *schedule, void *buffer, int count, MPI_Datatype datatype, int fragsize, int size) {
int res, vrank, rpeer, speer, numfrag, fragnum, fragcount, thiscount;
MPI_Aint ext;
char *buf;
RANK2VRANK(rank, vrank, root);
VRANK2RANK(rpeer, vrank-1, root);
VRANK2RANK(speer, vrank+1, root);
res = MPI_Type_extent(datatype, &ext);
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
if(count == 0) return NBC_OK;
numfrag = count*size/fragsize;
if((count*size)%fragsize != 0) numfrag++;
fragcount = count/numfrag;
//if(!rank) printf("numfrag: %i, count: %i, size: %i, fragcount: %i\n", numfrag, count, size, fragcount);
for(fragnum = 0; fragnum < numfrag; fragnum++) {
buf = (char*)buffer+fragnum*fragcount*ext;
thiscount = fragcount;
if(fragnum == numfrag-1) {
/* last fragment may not be full */
thiscount = count-fragcount*fragnum;
}
/* root does not receive */
if(vrank != 0) {
res = NBC_Sched_recv(buf, false, thiscount, datatype, rpeer, schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_recv() (%i)\n", res); return res; }
res = NBC_Sched_barrier(schedule);
}
/* last rank does not send */
if(vrank != p-1) {
res = NBC_Sched_send(buf, false, thiscount, datatype, speer, schedule);
if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; }
/* this barrier here seems awaward but isn't!!!! */
if(vrank == 0) res = NBC_Sched_barrier(schedule);
}
}
return NBC_OK;
}