253444c6d0
1. New mpifort wrapper compiler: you can utilize mpif.h, use mpi, and use mpi_f08 through this one wrapper compiler 1. mpif77 and mpif90 still exist, but are sym links to mpifort and may be removed in a future release 1. The mpi module has been re-implemented and is significantly "mo' bettah" 1. The mpi_f08 module offers many, many improvements over mpif.h and the mpi module This stuff is coming from a VERY long-lived mercurial branch (3 years!); it'll almost certainly take a few SVN commits and a bunch of testing before I get it correctly committed to the SVN trunk. == More details == Craig Rasmussen and I have been working with the MPI-3 Fortran WG and Fortran J3 committees for a long, long time to make a prototype MPI-3 Fortran bindings implementation. We think we're at a stable enough state to bring this stuff back to the trunk, with the goal of including it in OMPI v1.7. Special thanks go out to everyone who has been incredibly patient and helpful to us in this journey: * Rolf Rabenseifner/HLRS (mastermind/genius behind the entire MPI-3 Fortran effort) * The Fortran J3 committee * Tobias Burnus/gfortran * Tony !Goetz/Absoft * Terry !Donte/Oracle * ...and probably others whom I'm forgetting :-( There's still opportunities for optimization in the mpi_f08 implementation, but by and large, it is as far along as it can be until Fortran compilers start implementing the new F08 dimension(..) syntax. Note that gfortran is currently unsupported for the mpi_f08 module and the new mpi module. gfortran users will a) fall back to the same mpi module implementation that is in OMPI v1.5.x, and b) not get the new mpi_f08 module. The gfortran maintainers are actively working hard to add the necessary features to support both the new mpi_f08 module and the new mpi module implementations. This will take some time. As mentioned above, ompi/mpi/f77 and ompi/mpi/f90 no longer exist. All the fortran bindings implementations have been collated under ompi/mpi/fortran; each implementation has its own subdirectory: {{{ ompi/mpi/fortran/ base/ - glue code mpif-h/ - what used to be ompi/mpi/f77 use-mpi-tkr/ - what used to be ompi/mpi/f90 use-mpi-ignore-tkr/ - new mpi module implementation use-mpi-f08/ - new mpi_f08 module implementation }}} There's also a prototype 6-function-MPI implementation under use-mpi-f08-desc that emulates the new F08 dimension(..) syntax that isn't fully available in Fortran compilers yet. We did that to prove it to ourselves that it could be done once the compilers fully support it. This directory/implementation will likely eventually replace the use-mpi-f08 version. Other things that were done: * ompi_info grew a few new output fields to describe what level of Fortran support is included * Existing Fortran examples in examples/ were renamed; new mpi_f08 examples were added * The old Fortran MPI libraries were renamed: * libmpi_f77 -> libmpi_mpifh * libmpi_f90 -> libmpi_usempi * The configury for Fortran was consolidated and significantly slimmed down. Note that the F77 env variable is now IGNORED for configure; you should only use FC. Example: {{{ shell$ ./configure CC=icc CXX=icpc FC=ifort ... }}} All of this work was done in a Mercurial branch off the SVN trunk, and hosted at Bitbucket. This branch has got to be one of OMPI's longest-running branches. Its first commit was Tue Apr 07 23:01:46 2009 -0400 -- it's over 3 years old! :-) We think we've pulled in all relevant changes from the OMPI trunk (e.g., Fortran implementations of the new MPI-3 MPROBE stuff for mpif.h, use mpi, and use mpi_f08, and the recent Fujitsu Fortran patches). I anticipate some instability when we bring this stuff into the trunk, simply because it touches a LOT of code in the MPI layer in the OMPI code base. We'll try our best to make it as pain-free as possible, but please bear with us when it is committed. This commit was SVN r26283.
321 строка
8.5 KiB
C
321 строка
8.5 KiB
C
/* -*- Mode: C; c-basic-offset:4 ; -*- */
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/*
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2007 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2008-2009 Sun Microsystems, Inc. All rights reserved.
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* Copyright (c) 2009-2012 Cisco Systems, Inc. All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#include "ompi_config.h"
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#include "ompi/communicator/communicator.h"
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#include "ompi/file/file.h"
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#include "opal/class/opal_list.h"
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#include "opal/util/output.h"
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#include "ompi/runtime/params.h"
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#include "ompi/mca/io/base/base.h"
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#include "ompi/info/info.h"
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/*
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* Table for Fortran <-> C file handle conversion
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*/
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opal_pointer_array_t ompi_file_f_to_c_table;
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/*
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* MPI_FILE_NULL (_addr flavor is for F03 bindings)
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*/
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ompi_predefined_file_t ompi_mpi_file_null;
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ompi_predefined_file_t *ompi_mpi_file_null_addr = &ompi_mpi_file_null;
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/*
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* Local functions
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*/
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static void file_constructor(ompi_file_t *obj);
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static void file_destructor(ompi_file_t *obj);
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/*
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* Class instance for ompi_file_t
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*/
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OBJ_CLASS_INSTANCE(ompi_file_t,
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opal_object_t,
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file_constructor,
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file_destructor);
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/*
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* Initialize file handling bookeeping
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*/
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int ompi_file_init(void)
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{
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/* Setup file array */
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OBJ_CONSTRUCT(&ompi_file_f_to_c_table, opal_pointer_array_t);
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if( OPAL_SUCCESS != opal_pointer_array_init(&ompi_file_f_to_c_table, 0,
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OMPI_FORTRAN_HANDLE_MAX, 64) ) {
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return OMPI_ERROR;
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}
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/* Setup MPI_FILE_NULL. Note that it will have the default error
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handler of MPI_ERRORS_RETURN, per MPI-2:9.7 (p265). */
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OBJ_CONSTRUCT(&ompi_mpi_file_null.file, ompi_file_t);
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ompi_mpi_file_null.file.f_comm = &ompi_mpi_comm_null.comm;
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OBJ_RETAIN(ompi_mpi_file_null.file.f_comm);
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ompi_mpi_file_null.file.f_f_to_c_index = 0;
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opal_pointer_array_set_item(&ompi_file_f_to_c_table, 0,
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&ompi_mpi_file_null.file);
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/* All done */
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return OMPI_SUCCESS;
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}
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/*
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* Back end to MPI_FILE_OPEN
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*/
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int ompi_file_open(struct ompi_communicator_t *comm, char *filename,
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int amode, struct ompi_info_t *info, ompi_file_t **fh)
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{
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int ret;
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ompi_file_t *file;
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file = OBJ_NEW(ompi_file_t);
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if (NULL == file) {
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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/* Save the params */
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file->f_comm = comm;
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OBJ_RETAIN(comm);
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if (MPI_INFO_NULL != info) {
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if(NULL == file->f_info) {
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file->f_info = OBJ_NEW(ompi_info_t);
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}
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if (OMPI_SUCCESS != (ret = ompi_info_dup(info, &file->f_info))) {
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OBJ_RELEASE(file);
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return ret;
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}
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} else {
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file->f_info = MPI_INFO_NULL;
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OBJ_RETAIN(MPI_INFO_NULL);
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}
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file->f_amode = amode;
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file->f_filename = strdup(filename);
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if (NULL == file->f_filename) {
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OBJ_RELEASE(file);
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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/* Select a module and actually open the file */
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if (OMPI_SUCCESS != (ret = mca_io_base_file_select(file, NULL))) {
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OBJ_RELEASE(file);
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return ret;
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}
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/* All done */
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*fh = file;
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return OMPI_SUCCESS;
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}
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/*
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* Back end to MPI_FILE_CLOSE.
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*/
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int ompi_file_close(ompi_file_t **file)
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{
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(*file)->f_flags |= OMPI_FILE_ISCLOSED;
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OBJ_RELEASE(*file);
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*file = &ompi_mpi_file_null.file;
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return OMPI_SUCCESS;
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}
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/*
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* Shut down the MPI_File bookkeeping
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*/
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int ompi_file_finalize(void)
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{
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int i, max;
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size_t num_unnamed;
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ompi_file_t *file;
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/* Release MPI_FILE_NULL. Do this so that we don't get a bogus leak
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report on it. Plus, it's statically allocated, so we don't want
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to call OBJ_RELEASE on it. */
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OBJ_DESTRUCT(&ompi_mpi_file_null.file);
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opal_pointer_array_set_item(&ompi_file_f_to_c_table, 0, NULL);
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/* Iterate through all the file handles and destroy them. Note
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that this also takes care of destroying MPI_FILE_NULL. */
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max = opal_pointer_array_get_size(&ompi_file_f_to_c_table);
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for (num_unnamed = i = 0; i < max; ++i) {
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file = (ompi_file_t *)opal_pointer_array_get_item(&ompi_file_f_to_c_table, i);
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/* If the file was closed but still exists because the user
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told us to never free handles, then do an OBJ_RELEASE it
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and all is well. Then get the value again and see if it's
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actually been freed. */
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if (NULL != file && ompi_debug_no_free_handles &&
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0 == (file->f_flags & OMPI_FILE_ISCLOSED)) {
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OBJ_RELEASE(file);
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file = (ompi_file_t *)opal_pointer_array_get_item(&ompi_file_f_to_c_table, i);
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}
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if (NULL != file) {
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/* If the user wanted warnings about MPI object leaks,
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print out a message */
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if (ompi_debug_show_handle_leaks) {
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++num_unnamed;
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}
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OBJ_RELEASE(file);
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}
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/* Don't bother setting each element back down to NULL; it
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would just take a lot of thread locks / unlocks and since
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we're destroying everything, it isn't worth it */
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}
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if (num_unnamed > 0) {
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opal_output(0, "WARNING: %lu unnamed MPI_File handles still allocated at MPI_FINALIZE", (unsigned long)num_unnamed);
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}
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OBJ_DESTRUCT(&ompi_file_f_to_c_table);
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/* All done */
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return OMPI_SUCCESS;
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}
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/*
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* Constructor
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*/
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static void file_constructor(ompi_file_t *file)
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{
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/* Initialize the MPI_FILE_OPEN params */
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file->f_comm = NULL;
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file->f_filename = NULL;
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file->f_amode = 0;
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file->f_info = NULL;
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/* Initialize flags */
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file->f_flags = 0;
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/* Initialize the fortran <--> C translation index */
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file->f_f_to_c_index = opal_pointer_array_add(&ompi_file_f_to_c_table,
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file);
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/* Initialize the error handler. Per MPI-2:9.7 (p265), the
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default error handler on file handles is the error handler on
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MPI_FILE_NULL, which starts out as MPI_ERRORS_RETURN (but can
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be changed by invoking MPI_FILE_SET_ERRHANDLER on
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MPI_FILE_NULL). */
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file->errhandler_type = OMPI_ERRHANDLER_TYPE_FILE;
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if (file != &ompi_mpi_file_null.file) {
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file->error_handler = ompi_mpi_file_null.file.error_handler;
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} else {
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file->error_handler = &ompi_mpi_errors_return.eh;
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}
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OBJ_RETAIN(file->error_handler);
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/* Initialize the module */
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file->f_io_version = MCA_IO_BASE_V_NONE;
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memset(&(file->f_io_selected_module), 0,
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sizeof(file->f_io_selected_module));
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file->f_io_selected_data = NULL;
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/* If the user doesn't want us to ever free it, then add an extra
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RETAIN here */
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if (ompi_debug_no_free_handles) {
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OBJ_RETAIN(&(file->super));
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}
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}
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/*
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* Destructor
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*/
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static void file_destructor(ompi_file_t *file)
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{
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/* Finalize the module */
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switch (file->f_io_version) {
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case MCA_IO_BASE_V_2_0_0:
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file->f_io_selected_module.v2_0_0.io_module_file_close(file);
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break;
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default:
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/* Should never get here */
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break;
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}
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/* Finalize the data members */
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if (NULL != file->f_comm) {
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OBJ_RELEASE(file->f_comm);
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#if OPAL_ENABLE_DEBUG
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file->f_comm = NULL;
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#endif
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}
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if (NULL != file->f_filename) {
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free(file->f_filename);
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#if OPAL_ENABLE_DEBUG
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file->f_filename = NULL;
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#endif
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}
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if (NULL != file->error_handler) {
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OBJ_RELEASE(file->error_handler);
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#if OPAL_ENABLE_DEBUG
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file->error_handler = NULL;
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#endif
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}
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if (NULL != file->f_info) {
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OBJ_RELEASE(file->f_info);
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#if OPAL_ENABLE_DEBUG
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file->f_info = NULL;
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#endif
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}
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/* Reset the f_to_c table entry */
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if (MPI_UNDEFINED != file->f_f_to_c_index &&
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NULL != opal_pointer_array_get_item(&ompi_file_f_to_c_table,
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file->f_f_to_c_index)) {
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opal_pointer_array_set_item(&ompi_file_f_to_c_table,
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file->f_f_to_c_index, NULL);
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}
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}
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