64abd0f405
1. Remove debug output in iallgather (I have forgotten to remove it). 2. Remove an incorrect comment in description of ibcast Signed-off-by: Mikhail Kurnosov <mkurnosov@gmail.com>
415 строки
14 KiB
C
415 строки
14 KiB
C
/* -*- Mode: C; c-basic-offset:2 ; indent-tabs-mode:nil -*- */
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/*
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* Copyright (c) 2006 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2006 The Technical University of Chemnitz. All
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* rights reserved.
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* Copyright (c) 2014-2017 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
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* Copyright (c) 2015 Los Alamos National Security, LLC. All rights
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* reserved.
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* Copyright (c) 2017 IBM Corporation. All rights reserved.
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* Copyright (c) 2018 FUJITSU LIMITED. All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* Author(s): Torsten Hoefler <htor@cs.indiana.edu>
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*
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*/
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#include "nbc_internal.h"
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static inline int allgather_sched_linear(
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int rank, int comm_size, NBC_Schedule *schedule, const void *sendbuf,
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int scount, struct ompi_datatype_t *sdtype, void *recvbuf, int rcount,
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struct ompi_datatype_t *rdtype);
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static inline int allgather_sched_recursivedoubling(
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int rank, int comm_size, NBC_Schedule *schedule, const void *sbuf,
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int scount, struct ompi_datatype_t *sdtype, void *rbuf, int rcount,
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struct ompi_datatype_t *rdtype);
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#ifdef NBC_CACHE_SCHEDULE
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/* tree comparison function for schedule cache */
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int NBC_Allgather_args_compare(NBC_Allgather_args *a, NBC_Allgather_args *b, void *param) {
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if ((a->sendbuf == b->sendbuf) &&
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(a->sendcount == b->sendcount) &&
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(a->sendtype == b->sendtype) &&
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(a->recvbuf == b->recvbuf) &&
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(a->recvcount == b->recvcount) &&
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(a->recvtype == b->recvtype) ) {
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return 0;
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}
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if( a->sendbuf < b->sendbuf ) {
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return -1;
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}
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return 1;
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}
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#endif
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static int nbc_allgather_init(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount,
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MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request,
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struct mca_coll_base_module_2_3_0_t *module, bool persistent)
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{
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int rank, p, res;
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MPI_Aint rcvext;
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NBC_Schedule *schedule;
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char *rbuf, inplace;
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#ifdef NBC_CACHE_SCHEDULE
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NBC_Allgather_args *args, *found, search;
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#endif
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enum { NBC_ALLGATHER_LINEAR, NBC_ALLGATHER_RDBL} alg;
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ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
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NBC_IN_PLACE(sendbuf, recvbuf, inplace);
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rank = ompi_comm_rank (comm);
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p = ompi_comm_size (comm);
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int is_commsize_pow2 = !(p & (p - 1));
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if (libnbc_iallgather_algorithm == 0) {
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alg = NBC_ALLGATHER_LINEAR;
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} else {
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/* user forced dynamic decision */
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if (libnbc_iallgather_algorithm == 1) {
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alg = NBC_ALLGATHER_LINEAR;
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} else if (libnbc_iallgather_algorithm == 2 && is_commsize_pow2) {
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alg = NBC_ALLGATHER_RDBL;
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} else {
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alg = NBC_ALLGATHER_LINEAR;
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}
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}
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res = ompi_datatype_type_extent(recvtype, &rcvext);
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if (MPI_SUCCESS != res) {
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return res;
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}
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if (inplace) {
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sendtype = recvtype;
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sendcount = recvcount;
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} else if (!persistent) { /* for persistent, the copy must be scheduled */
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/* copy my data to receive buffer */
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rbuf = (char *) recvbuf + rank * recvcount * rcvext;
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res = NBC_Copy (sendbuf, sendcount, sendtype, rbuf, recvcount, recvtype, comm);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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return res;
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}
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}
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if (1 == p && (!persistent || inplace)) {
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return nbc_get_noop_request(persistent, request);
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}
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#ifdef NBC_CACHE_SCHEDULE
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/* search schedule in communicator specific tree */
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search.sendbuf = sendbuf;
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search.sendcount = sendcount;
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search.sendtype = sendtype;
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search.recvbuf = recvbuf;
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search.recvcount = recvcount;
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search.recvtype = recvtype;
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found = (NBC_Allgather_args *) hb_tree_search ((hb_tree*)libnbc_module->NBC_Dict[NBC_ALLGATHER], &search);
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if (NULL == found) {
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#endif
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schedule = OBJ_NEW(NBC_Schedule);
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if (OPAL_UNLIKELY(NULL == schedule)) {
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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if (persistent && !inplace) {
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/* for nonblocking, data has been copied already */
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/* copy my data to receive buffer (= send buffer of NBC_Sched_send) */
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rbuf = (char *)recvbuf + rank * recvcount * rcvext;
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res = NBC_Sched_copy((void *)sendbuf, false, sendcount, sendtype,
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rbuf, false, recvcount, recvtype, schedule, true);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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}
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switch (alg) {
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case NBC_ALLGATHER_LINEAR:
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res = allgather_sched_linear(rank, p, schedule, sendbuf, sendcount, sendtype,
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recvbuf, recvcount, recvtype);
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break;
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case NBC_ALLGATHER_RDBL:
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res = allgather_sched_recursivedoubling(rank, p, schedule, sendbuf, sendcount,
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sendtype, recvbuf, recvcount, recvtype);
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break;
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}
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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res = NBC_Sched_commit(schedule);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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#ifdef NBC_CACHE_SCHEDULE
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/* save schedule to tree */
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args = (NBC_Allgather_args *) malloc (sizeof (args));
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args->sendbuf = sendbuf;
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args->sendcount = sendcount;
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args->sendtype = sendtype;
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args->recvbuf = recvbuf;
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args->recvcount = recvcount;
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args->recvtype = recvtype;
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args->schedule = schedule;
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res = hb_tree_insert ((hb_tree *) libnbc_module->NBC_Dict[NBC_ALLGATHER], args, args, 0);
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if (res != 0) {
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free (args);
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} else {
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OBJ_RETAIN(schedule);
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}
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/* increase number of elements for A2A */
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if (++libnbc_module->NBC_Dict_size[NBC_ALLGATHER] > NBC_SCHED_DICT_UPPER) {
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NBC_SchedCache_dictwipe ((hb_tree *) libnbc_module->NBC_Dict[NBC_ALLGATHER], &libnbc_module->NBC_Dict_size[NBC_ALLGATHER]);
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}
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} else {
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/* found schedule */
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schedule = found->schedule;
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OBJ_RETAIN(schedule);
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}
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#endif
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res = NBC_Schedule_request(schedule, comm, libnbc_module, persistent, request, NULL);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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return OMPI_SUCCESS;
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}
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int ompi_coll_libnbc_iallgather(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount,
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MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request,
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struct mca_coll_base_module_2_3_0_t *module)
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{
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int res = nbc_allgather_init(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype,
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comm, request, module, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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return res;
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}
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res = NBC_Start(*(ompi_coll_libnbc_request_t **)request);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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NBC_Return_handle (*(ompi_coll_libnbc_request_t **)request);
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*request = &ompi_request_null.request;
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return res;
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}
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return OMPI_SUCCESS;
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}
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static int nbc_allgather_inter_init(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount,
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MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request,
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struct mca_coll_base_module_2_3_0_t *module, bool persistent)
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{
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int res, rsize;
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MPI_Aint rcvext;
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NBC_Schedule *schedule;
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char *rbuf;
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ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module;
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res = ompi_datatype_type_extent(recvtype, &rcvext);
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if (MPI_SUCCESS != res) {
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NBC_Error ("MPI Error in ompi_datatype_type_extent() (%i)", res);
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return res;
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}
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rsize = ompi_comm_remote_size (comm);
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/* set up schedule */
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schedule = OBJ_NEW(NBC_Schedule);
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if (OPAL_UNLIKELY(NULL == schedule)) {
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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/* do rsize - 1 rounds */
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for (int r = 0 ; r < rsize ; ++r) {
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/* recv from rank r */
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rbuf = (char *) recvbuf + r * recvcount * rcvext;
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res = NBC_Sched_recv (rbuf, false, recvcount, recvtype, r, schedule, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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/* send to rank r */
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res = NBC_Sched_send (sendbuf, false, sendcount, sendtype, r, schedule, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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}
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res = NBC_Sched_commit (schedule);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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res = NBC_Schedule_request(schedule, comm, libnbc_module, persistent, request, NULL);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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OBJ_RELEASE(schedule);
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return res;
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}
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return OMPI_SUCCESS;
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}
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int ompi_coll_libnbc_iallgather_inter(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount,
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MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request,
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struct mca_coll_base_module_2_3_0_t *module) {
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int res = nbc_allgather_inter_init(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype,
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comm, request, module, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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return res;
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}
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res = NBC_Start(*(ompi_coll_libnbc_request_t **)request);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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NBC_Return_handle (*(ompi_coll_libnbc_request_t **)request);
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*request = &ompi_request_null.request;
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return res;
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}
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return OMPI_SUCCESS;
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}
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/*
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* allgather_sched_linear
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*
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* Description: an implementation of Iallgather using linear algorithm
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*
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* Time: O(comm_size)
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* Schedule length (rounds): O(comm_size)
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*/
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static inline int allgather_sched_linear(
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int rank, int comm_size, NBC_Schedule *schedule, const void *sendbuf,
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int scount, struct ompi_datatype_t *sdtype, void *recvbuf, int rcount,
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struct ompi_datatype_t *rdtype)
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{
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int res = OMPI_SUCCESS;
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ptrdiff_t rlb, rext;
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res = ompi_datatype_get_extent(rdtype, &rlb, &rext);
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char *sbuf = (char *)recvbuf + rank * rcount * rext;
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for (int remote = 0; remote < comm_size ; ++remote) {
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if (remote != rank) {
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/* Recv from rank remote */
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char *rbuf = (char *)recvbuf + remote * rcount * rext;
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res = NBC_Sched_recv(rbuf, false, rcount, rdtype, remote, schedule, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) { goto cleanup_and_return; }
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/* Send to rank remote - not from the sendbuf to optimize MPI_IN_PLACE */
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res = NBC_Sched_send(sbuf, false, rcount, rdtype, remote, schedule, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) { goto cleanup_and_return; }
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}
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}
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cleanup_and_return:
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return res;
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}
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/*
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* allgather_sched_recursivedoubling
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*
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* Description: an implementation of Iallgather using recursive doubling algorithm
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* Limitation: power-of-two number of processes only
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* Time: O(log(comm_size))
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* Schedule length (rounds): O(log(comm_size))
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* Memory: no additional memory requirements beyond user-supplied buffers.
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*
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* Example on 4 nodes:
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* Initialization: everyone has its own buffer at location rank in rbuf
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* # 0 1 2 3
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* [0] [ ] [ ] [ ]
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* [ ] [1] [ ] [ ]
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* [ ] [ ] [2] [ ]
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* [ ] [ ] [ ] [3]
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* Step 0: exchange data with (rank ^ 2^0)
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* # 0 1 2 3
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* [0] [0] [ ] [ ]
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* [1] [1] [ ] [ ]
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* [ ] [ ] [2] [2]
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* [ ] [ ] [3] [3]
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* Step 1: exchange data with (rank ^ 2^1) (if you can)
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* # 0 1 2 3
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* [0] [0] [0] [0]
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* [1] [1] [1] [1]
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* [2] [2] [2] [2]
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* [3] [3] [3] [3]
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*
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*/
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static inline int allgather_sched_recursivedoubling(
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int rank, int comm_size, NBC_Schedule *schedule, const void *sbuf,
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int scount, struct ompi_datatype_t *sdtype, void *rbuf, int rcount,
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struct ompi_datatype_t *rdtype)
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{
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int res = OMPI_SUCCESS;
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ptrdiff_t rlb, rext;
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char *tmpsend = NULL, *tmprecv = NULL;
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res = ompi_datatype_get_extent(rdtype, &rlb, &rext);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) { goto cleanup_and_return; }
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int sendblocklocation = rank;
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for (int distance = 1; distance < comm_size; distance <<= 1) {
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int remote = rank ^ distance;
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tmpsend = (char *)rbuf + (ptrdiff_t)sendblocklocation * (ptrdiff_t)rcount * rext;
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if (rank < remote) {
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tmprecv = (char *)rbuf + (ptrdiff_t)(sendblocklocation + distance) * (ptrdiff_t)rcount * rext;
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} else {
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tmprecv = (char *)rbuf + (ptrdiff_t)(sendblocklocation - distance) * (ptrdiff_t)rcount * rext;
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sendblocklocation -= distance;
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}
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res = NBC_Sched_send(tmpsend, false, (ptrdiff_t)distance * (ptrdiff_t)rcount,
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rdtype, remote, schedule, false);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) { goto cleanup_and_return; }
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res = NBC_Sched_recv(tmprecv, false, (ptrdiff_t)distance * (ptrdiff_t)rcount,
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rdtype, remote, schedule, true);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) { goto cleanup_and_return; }
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}
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cleanup_and_return:
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return res;
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}
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int ompi_coll_libnbc_allgather_init(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount,
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MPI_Datatype recvtype, struct ompi_communicator_t *comm, MPI_Info info, ompi_request_t ** request,
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struct mca_coll_base_module_2_3_0_t *module) {
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int res = nbc_allgather_init(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype,
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comm, request, module, true);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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return res;
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}
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return OMPI_SUCCESS;
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}
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int ompi_coll_libnbc_allgather_inter_init(const void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount,
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MPI_Datatype recvtype, struct ompi_communicator_t *comm, MPI_Info info, ompi_request_t ** request,
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struct mca_coll_base_module_2_3_0_t *module) {
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int res = nbc_allgather_inter_init(sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype,
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comm, request, module, true);
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if (OPAL_UNLIKELY(OMPI_SUCCESS != res)) {
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return res;
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}
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return OMPI_SUCCESS;
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}
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