3a683419c5
This is hot-fix patch for the issue reported by Ralph. In future we plan to restructure ml data structure layout. Tested by Nathan. cmr=v1.7.5:ticket=trac:4158 This commit was SVN r30619. The following Trac tickets were found above: Ticket 4158 --> https://svn.open-mpi.org/trac/ompi/ticket/4158
472 строки
13 KiB
C
472 строки
13 KiB
C
/*
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* Copyright (c) 2009-2012 Oak Ridge National Laboratory. All rights reserved.
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* Copyright (c) 2009-2012 Mellanox Technologies. All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#ifndef MCA_BCOL_PTPCOLL_EXPORT_H
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#define MCA_BCOL_PTPCOLL_EXPORT_H
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#include "ompi_config.h"
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#include "mpi.h"
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#include "opal/mca/mca.h"
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#include "ompi/mca/bcol/bcol.h"
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#include "ompi/mca/mpool/mpool.h"
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#include "ompi/request/request.h"
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#include "ompi/mca/pml/pml.h"
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#include "ompi/mca/coll/ml/coll_ml_allocation.h"
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#include "ompi/patterns/net/netpatterns.h"
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BEGIN_C_DECLS
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#ifdef HAVE_SCHED_YIELD
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# include <sched.h>
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# define SPIN sched_yield()
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#else /* no switch available */
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# define SPIN
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#endif
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/**
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* Structure to hold the basic shared memory coll component. First it holds the
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* base coll component, and then holds a bunch of
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* sm-coll-component-specific stuff (e.g., current MCA param
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* values).
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*/
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struct mca_bcol_ptpcoll_component_t {
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/** Base coll component */
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mca_bcol_base_component_2_0_0_t super;
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/** Verbosity level, used only in debug enabled builds */
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int verbose;
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/** The radix of K-nomial tree, initilized by mca parameter */
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int k_nomial_radix;
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/** The radix of narray tree, initilized by mca parameter */
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int narray_radix;
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/** The radix is used for narray scatther and knomail gather for
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large message bcast **/
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int narray_knomial_radix;
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/** Number of times to poll for specific tag/src */
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int num_to_probe;
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/*
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* bcast small messages algorithm
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* 1 - Knomial bcast
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* 2 - Narray bcast
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*/
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int bcast_small_messages_known_root_alg;
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/*
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* bcast large messages algorithm
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* 1 - binomial scatter-gather
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* 2 - Narray scatther, knomial gather
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*/
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int bcast_large_messages_known_root_alg;
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/*
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* barrier algorithm
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* 1 - recursive doubling
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* 2 - recursive K-ing
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*/
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int barrier_alg;
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int use_brucks_smsg_alltoall_rdma;
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};
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struct mca_bcol_ptpcoll_collreq_t {
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ompi_free_list_item_t super;
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int tag;
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int num_reqs;
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int exchange;
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int need_toserv_extra;
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int extra_partner_rank;
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ompi_request_t **requests;
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};
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typedef struct mca_bcol_ptpcoll_collreq_t mca_bcol_ptpcoll_collreq_t;
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OBJ_CLASS_DECLARATION(mca_bcol_ptpcoll_collreq_t);
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/**
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* Convenience typedef
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*/
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typedef struct mca_bcol_ptpcoll_component_t mca_bcol_ptpcoll_component_t;
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/* Bcast small messages,
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known root algorithm */
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enum {
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PTPCOLL_KNOMIAL = 1,
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PTPCOLL_NARRAY
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};
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/* Bcast large messages,
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known root algorithm */
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enum {
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PTPCOLL_BINOMIAL_SG = 1, /* Binomila scatter-gather */
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PTPCOLL_NARRAY_KNOMIAL_SG /* Narray-Knomial scatter-gather */
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};
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/*
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* Implemented function index list
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*/
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/* barrier */
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enum{
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FANIN_FAN_OUT_BARRIER_FN,
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RECURSIVE_DOUBLING_BARRIER_FN,
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N_BARRIER_FNS
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};
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/* reduce */
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enum{
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FANIN_REDUCE_FN,
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REDUCE_SCATTER_GATHER_FN,
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N_REDUCE_FNS
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};
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enum{
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SHORT_DATA_FN_REDUCE,
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LONG_DATA_FN_REDUCE,
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N_REDUCE_FNS_USED
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};
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/* all-reduce */
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enum{
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FANIN_FANOUT_ALLREDUCE_FN,
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REDUCE_SCATTER_ALLGATHER_FN,
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N_ALLREDUCE_FNS
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};
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enum{
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SHORT_DATA_FN_ALLREDUCE,
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LONG_DATA_FN_ALLREDUCE,
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N_ALLREDUCE_FNS_USED
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};
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/*
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* N-order tree node description
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*/
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struct tree_node_t {
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/* my rank within the group */
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int my_rank;
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/* my node type - root, leaf, or interior */
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int my_node_type;
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/* number of nodes in the tree */
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int tree_size;
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/* number of parents (0/1) */
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int n_parents;
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/* number of children */
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int n_children;
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/* parent rank within the group */
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int parent_rank;
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/* chidren ranks within the group */
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int *children_ranks;
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};
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typedef struct tree_node_t tree_node_t;
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struct pair_exchange_node_t {
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/* number of nodes this node will exchange data with */
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int n_exchanges;
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/* ranks of nodes involved in data exchnge */
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int *rank_exchanges;
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/* number of extra sources of data - outside largest power of 2 in
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* this group */
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int n_extra_sources;
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/* rank of the extra source */
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int rank_extra_source;
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/* number of tags needed per stripe */
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int n_tags;
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/* log 2 of largest full power of 2 for this node set */
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int log_2;
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/* largest power of 2 that fits in this group */
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int n_largest_pow_2;
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/* node type */
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int node_type;
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};
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typedef struct pair_exchange_node_t pair_exchange_node_t;
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/*
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* Barrier request objects
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*/
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/* enum for phase at which the nb barrier is in */
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enum{
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NB_BARRIER_INACTIVE,
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NB_BARRIER_FAN_IN,
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NB_BARRIER_FAN_OUT,
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/* done and not started are the same for all practicle
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* purposes, as the init funtion always sets this flag
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*/
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NB_BARRIER_DONE
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};
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typedef enum {
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PTPCOLL_NOT_STARTED = 1,
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PTPCOLL_WAITING_FOR_DATA = 1 << 1,
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PTPCOLL_SCATTER_STARTED = 1 << 2,
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PTPCOLL_GATHER_STARTED = 1 << 3,
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PTPCOLL_EXTRA_SEND_STARTED = 1 << 4,
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PTPCOLL_ROOT_SEND_STARTED = 1 << 5
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} ptpcoll_op_status;
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struct mca_bcol_ptpcoll_ml_buffer_desc_t {
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void *data_addr; /* buffer address */
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uint64_t bank_index; /* my bank */
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uint64_t buffer_index; /* my buff index */
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int active_requests; /* keep number of active requests */
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ompi_request_t **requests; /* caching pointers to requests */
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int data_src; /* used for bcast to cache internal data */
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int radix_mask; /* used for bcast to cache internal data */
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int radix_mask_pow; /* used for bcast to cache internal data */
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int iteration; /* buffer iteration in knomial, binomail, etc. algorithms */
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int tag; /* tag number that is attached to this operation */
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int status; /* operation status */
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/* Fixme: Probably we can get rid of these fields by redesigning
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* the reduce implementation
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*/
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int reduction_status; /* used for reduction to cache internal
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reduction status */
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bool reduce_init_called;
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};
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typedef struct mca_bcol_ptpcoll_ml_buffer_desc_t mca_bcol_ptpcoll_ml_buffer_desc_t;
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/*
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* Information that we need to keep in order to access and
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* track local ML memory that is used as source and destinatination
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* for collectives operations
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*/
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struct mca_bcol_ptpcoll_local_mlmem_desc_t {
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/* Bank index to release */
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uint32_t bank_index_for_release;
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/* number of memory banks */
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uint32_t num_banks;
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/* number of buffers per bank */
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uint32_t num_buffers_per_bank;
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/* size of a payload buffer */
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uint32_t size_buffer;
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/* pointer to buffer descriptors initialized */
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mca_bcol_ptpcoll_ml_buffer_desc_t *ml_buf_desc;
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};
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typedef struct mca_bcol_ptpcoll_local_mlmem_desc_t mca_bcol_ptpcoll_local_mlmem_desc_t;
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typedef enum {
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PTPCOLL_PROXY = 1,
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PTPCOLL_IN_GROUP = 1 << 1,
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PTPCOLL_EXTRA = 1 << 2,
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PTPCOLL_KN_PROXY = 1 << 3,
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PTPCOLL_KN_IN_GROUP = 1 << 4,
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PTPCOLL_KN_EXTRA = 1 << 5
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} node_type_pow2;
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struct mca_bcol_ptpcoll_module_t {
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/* base structure */
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mca_bcol_base_module_t super;
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/* size */
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int group_size;
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/* size of each memory segment */
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size_t segment_size;
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/* k_nomial radix */
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int k_nomial_radix;
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/* caching power of K, for K-nomial operations */
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int pow_k;
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/* caching power of K number that is smaller or equal to size of group */
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int pow_knum;
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/* caching power of 2, it is special case for some algorithms */
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int pow_2;
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/* caching power of 2 number that is closet to size of group */
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int pow_2num;
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/* type of this node in group of power 2 */
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int pow_2type;
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/* type of this node in group of K-nomaial tree */
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int pow_ktype;
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/* type of this node in group of narray tree */
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int narray_type;
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/* size of full narray tree */
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int full_narray_tree_size;
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/* num leafs on last level */
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int full_narray_tree_num_leafs;
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/* Nary tree info */
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netpatterns_tree_node_t *narray_node;
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/* if the rank in group, it keeps the extra peer.
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if the rank is extra, it keeps the proxy peer.
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*/
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int proxy_extra_index; /* pow2 algorithm */
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int *kn_proxy_extra_index; /* K nomaila algorithm */
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int kn_proxy_extra_num; /* number of extra peers , maximum k - 1*/
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/* collective tag */
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long long collective_tag;
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/* tag mask - the pml has a limit on tag size, so need
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* to wrap around
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*/
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uint64_t tag_mask;
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/* Caching information about local ml memory.
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* Since ptpcoll does not support RDMA operations over pml,
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* we don't need to keep any information about remote buffers
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*/
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mca_bcol_ptpcoll_local_mlmem_desc_t ml_mem;
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/* Narray-Knomial scatther gather */
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/* list of extra indexes */
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int *narray_knomial_proxy_extra_index;
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/* number of extra peers , maximum k - 1*/
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int narray_knomial_proxy_num;
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/* Narray-Knomial node information array */
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netpatterns_narray_knomial_tree_node_t *narray_knomial_node;
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/* Knomial exchange tree */
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netpatterns_k_exchange_node_t knomial_exchange_tree;
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/* knomial allgather tree --- Do not disable, we need both
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different algorithms define recursive k - ing differently
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*/
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netpatterns_k_exchange_node_t knomial_allgather_tree;
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/* Knomial allgather offsets */
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int **allgather_offsets;
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/* Free lists of outstanding collective operations */
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ompi_free_list_t collreqs_free;
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int log_group_size;
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struct iovec *alltoall_iovec;
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};
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typedef struct mca_bcol_ptpcoll_module_t mca_bcol_ptpcoll_module_t;
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OBJ_CLASS_DECLARATION(mca_bcol_ptpcoll_module_t);
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/**
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* Global component instance
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*/
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OMPI_MODULE_DECLSPEC extern mca_bcol_ptpcoll_component_t
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mca_bcol_ptpcoll_component;
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/*
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* coll module functions
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*/
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/* query to see if the component is available for use, and can
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* satisfy the thread and progress requirements
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*/
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int mca_bcol_ptpcoll_init_query(bool enable_progress_threads,
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bool enable_mpi_threads);
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/* query to see if the module is available for use on the given
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* communicator, and if so, what it's priority is.
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*/
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mca_bcol_base_module_t **
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mca_bcol_ptpcoll_comm_query(mca_sbgp_base_module_t *sbgp, int *num_modules);
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/* interface function to setup recursive k-ing tree */
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int mca_bcol_ptpcoll_setup_knomial_tree(mca_bcol_base_module_t *super);
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/* barrier routines */
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int bcol_ptpcoll_barrier_recurs_dbl(bcol_function_args_t *input_args,
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struct mca_bcol_base_function_t *const_args);
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int bcol_ptpcoll_barrier_recurs_knomial(bcol_function_args_t *input_args,
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struct mca_bcol_base_function_t *const_args);
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int bcol_ptpcoll_barrier_init(mca_bcol_base_module_t *super);
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int mca_bcol_ptpcoll_memsync_init(mca_bcol_base_module_t *super);
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void * bcol_ptpcoll_allocate_memory(size_t length, size_t alignment,
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struct mca_bcol_base_module_t *bcol_module);
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int bcol_ptpcoll_register_memory(void * in_ptr, size_t length, size_t alignment,
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struct mca_bcol_base_module_t *bcol_module);
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int bcol_ptpcoll_deregister_memory( void * in_ptr,
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struct mca_bcol_base_module_t *bcol_module);
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int bcol_ptpcoll_free_memory(void *ptr,
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struct mca_bcol_base_module_t *bcol_module);
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int bcol_ptpcoll_fanin( bcol_function_args_t *input_args,
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struct mca_bcol_base_module_t *module);
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int bcol_ptpcoll_fanout( bcol_function_args_t *input_args,
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struct mca_bcol_base_function_t *const_args);
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/* allgather routine */
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int bcol_ptpcoll_k_nomial_allgather_init(bcol_function_args_t *input_args,
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struct mca_bcol_base_function_t *const_args);
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/* allgather progress */
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int bcol_ptpcoll_k_nomial_allgather_progress(bcol_function_args_t *input_args,
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struct mca_bcol_base_function_t *const_args);
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/* allgather register */
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int bcol_ptpcoll_allgather_init(mca_bcol_base_module_t *super);
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static inline __opal_attribute_always_inline__
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int mca_bcol_ptpcoll_test_for_match(ompi_request_t **request , int *rc)
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{
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int matched = 0;
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int i;
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mca_bcol_ptpcoll_component_t *cm = &mca_bcol_ptpcoll_component;
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*rc = OMPI_SUCCESS;
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for (i = 0; i < cm->num_to_probe &&
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0 == matched && OMPI_SUCCESS == *rc ; i++) {
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*rc = ompi_request_test(request, &matched, MPI_STATUS_IGNORE);
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}
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return matched;
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}
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static inline __opal_attribute_always_inline__
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int mca_bcol_ptpcoll_test_all_for_match(int *n_requests, ompi_request_t **requests , int *rc)
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{
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int matched = 0;
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int i;
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mca_bcol_ptpcoll_component_t *cm = &mca_bcol_ptpcoll_component;
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*rc = OMPI_SUCCESS;
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assert(*n_requests >= 0);
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if (0 == *n_requests) {
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return 1;
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}
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for (i = 0; i < cm->num_to_probe &&
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0 == matched && OMPI_SUCCESS == *rc; i++) {
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*rc = ompi_request_test_all
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(*n_requests, requests, &matched, MPI_STATUS_IGNORE);
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}
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if (matched) {
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*n_requests = 0;
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}
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return matched;
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}
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/* Some negative tags already used by OMPI, making sure that we take safe offset */
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#define PTPCOLL_TAG_OFFSET 100
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#define PTPCOLL_TAG_FACTOR 2
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static inline int lognum(int n){
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int count = 1, lognum = 0;
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while (count < n) {
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count = count << 1;
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lognum++;
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}
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return lognum;
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}
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END_C_DECLS
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#endif /* MCA_BCOL_PTPCOLL_EXPORT_H */
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