fe351f6801
update the io framework and mpi c bindings
232 строки
7.9 KiB
C
232 строки
7.9 KiB
C
/*
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* Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2004-2005 The University of Tennessee and The University
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* of Tennessee Research Foundation. All rights
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* reserved.
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* Copyright (c) 2004-2005 High Performance Computing Center Stuttgart,
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* University of Stuttgart. All rights reserved.
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* Copyright (c) 2004-2005 The Regents of the University of California.
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* All rights reserved.
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* Copyright (c) 2013 University of Houston. All rights reserved.
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* Copyright (c) 2015 Research Organization for Information Science
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* and Technology (RIST). All rights reserved.
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* $COPYRIGHT$
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*
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* Additional copyrights may follow
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*
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* $HEADER$
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*/
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#include "ompi_config.h"
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#include "sharedfp_sm.h"
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#include "mpi.h"
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#include "ompi/constants.h"
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#include "ompi/mca/sharedfp/sharedfp.h"
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#include "ompi/mca/sharedfp/base/base.h"
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int mca_sharedfp_sm_iwrite(mca_io_ompio_file_t *fh,
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const void *buf,
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int count,
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ompi_datatype_t *datatype,
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MPI_Request * request)
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{
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int ret = OMPI_SUCCESS;
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OMPI_MPI_OFFSET_TYPE offset = 0;
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long bytesRequested = 0;
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size_t numofBytes;
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struct mca_sharedfp_base_data_t *sh = NULL;
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mca_sharedfp_base_module_t * shared_fp_base_module = NULL;
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if( NULL == fh->f_sharedfp_data){
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"sharedfp_sm_iwrite - opening the shared file pointer\n");
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}
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shared_fp_base_module = fh->f_sharedfp;
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ret = shared_fp_base_module->sharedfp_file_open(fh->f_comm,
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fh->f_filename,
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fh->f_amode,
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fh->f_info,
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fh);
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if ( OMPI_SUCCESS != ret ) {
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opal_output(0,"sharedfp_sm_iwrite - error opening the shared file pointer\n");
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return ret;
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}
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}
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/* Calculate the number of bytes to write */
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opal_datatype_type_size ( &datatype->super, &numofBytes);
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bytesRequested = count * numofBytes;
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/* Retrieve the shared file data struct */
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sh = fh->f_sharedfp_data;
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"sharedfp_sm_iwrite: Bytes Requested is %ld\n",bytesRequested);
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}
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/* Request the offset to write bytesRequested bytes */
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ret = mca_sharedfp_sm_request_position(sh,bytesRequested,&offset);
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offset /= sh->sharedfh->f_etype_size;
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if ( -1 != ret ) {
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"sharedfp_sm_iwrite: Offset received is %lld\n",offset);
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}
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/* Write to the file */
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ret = ompio_io_ompio_file_iwrite_at(sh->sharedfh,offset,buf,count,datatype,request);
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}
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return ret;
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}
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int mca_sharedfp_sm_write_ordered_begin(mca_io_ompio_file_t *fh,
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const void *buf,
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int count,
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struct ompi_datatype_t *datatype)
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{
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int ret = OMPI_SUCCESS;
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OMPI_MPI_OFFSET_TYPE offset = 0;
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long sendBuff = 0;
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long *buff=NULL;
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long offsetBuff;
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OMPI_MPI_OFFSET_TYPE offsetReceived = 0;
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long bytesRequested = 0;
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int recvcnt = 1, sendcnt = 1;
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size_t numofBytes;
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int rank, size, i;
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struct mca_sharedfp_base_data_t *sh = NULL;
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mca_sharedfp_base_module_t * shared_fp_base_module = NULL;
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if ( NULL == fh->f_sharedfp_data){
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"sharedfp_sm_write_ordered_begin: opening the shared file pointer\n");
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}
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shared_fp_base_module = fh->f_sharedfp;
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ret = shared_fp_base_module->sharedfp_file_open(fh->f_comm,
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fh->f_filename,
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fh->f_amode,
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fh->f_info,
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fh);
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if ( OMPI_SUCCESS != ret ) {
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opal_output(0,"sharedfp_sm_write_ordered_begin - error opening the shared file pointer\n");
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return ret;
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}
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}
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if ( true == fh->f_split_coll_in_use ) {
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opal_output(0, "Only one split collective I/O operation allowed per file handle at any given point in time!\n");
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return MPI_ERR_REQUEST;
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}
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/*Retrieve the new communicator*/
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sh = fh->f_sharedfp_data;
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/* Calculate the number of bytes to read*/
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opal_datatype_type_size ( &datatype->super, &numofBytes);
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sendBuff = count * numofBytes;
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/* Get the ranks in the communicator */
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rank = ompi_comm_rank ( sh->comm );
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size = ompi_comm_size ( sh->comm );
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if ( 0 == rank ) {
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buff = (long*)malloc(sizeof(long) * size);
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if ( NULL == buff )
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return OMPI_ERR_OUT_OF_RESOURCE;
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}
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ret = sh->comm->c_coll.coll_gather ( &sendBuff, sendcnt, OMPI_OFFSET_DATATYPE,
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buff, recvcnt, OMPI_OFFSET_DATATYPE, 0,
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sh->comm, sh->comm->c_coll.coll_gather_module );
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if( OMPI_SUCCESS != ret){
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goto exit;
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}
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/* All the counts are present now in the recvBuff.
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** The size of recvBuff is sizeof_newComm
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*/
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if ( 0 == rank ) {
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for (i = 0; i < size ; i ++) {
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bytesRequested += buff[i];
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"mca_sharedfp_sm_write_ordered_begin: Bytes requested are %ld\n",
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bytesRequested);
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}
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}
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/* Request the offset to read bytesRequested bytes
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** only the root process needs to do the request,
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** since the root process will then tell the other
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** processes at what offset they should read their
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** share of the data.
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*/
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ret = mca_sharedfp_sm_request_position(sh,bytesRequested,&offsetReceived);
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if( OMPI_SUCCESS != ret){
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goto exit;
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}
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"mca_sharedfp_sm_write_ordered_begin: Offset received is %lld\n",offsetReceived);
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}
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buff[0] += offsetReceived;
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for (i = 1 ; i < size; i++) {
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buff[i] += buff[i-1];
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}
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}
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/* Scatter the results to the other processes*/
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ret = sh->comm->c_coll.coll_scatter ( buff, sendcnt, OMPI_OFFSET_DATATYPE,
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&offsetBuff, recvcnt, OMPI_OFFSET_DATATYPE, 0,
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sh->comm, sh->comm->c_coll.coll_scatter_module );
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if( OMPI_SUCCESS != ret){
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goto exit;
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}
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/*Each process now has its own individual offset in recvBUFF*/
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offset = offsetBuff - sendBuff;
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offset /= sh->sharedfh->f_etype_size;
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if ( mca_sharedfp_sm_verbose ) {
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opal_output(ompi_sharedfp_base_framework.framework_output,
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"mca_sharedfp_sm_write_ordered_begin: Offset returned is %lld\n",offset);
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}
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/* read to the file */
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ret = ompio_io_ompio_file_iwrite_at_all(sh->sharedfh,offset,buf,count,datatype,
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&fh->f_split_coll_req);
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fh->f_split_coll_in_use = true;
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exit:
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if ( NULL != buff ) {
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free ( buff );
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}
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return ret;
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}
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int mca_sharedfp_sm_write_ordered_end(mca_io_ompio_file_t *fh,
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const void *buf,
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ompi_status_public_t *status)
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{
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int ret = OMPI_SUCCESS;
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ret = ompi_request_wait ( &fh->f_split_coll_req, status );
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/* remove the flag again */
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fh->f_split_coll_in_use = false;
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return ret;
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}
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