600 строки
18 KiB
C
600 строки
18 KiB
C
/*
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* Copyright (c) 2006 The Trustees of Indiana University and Indiana
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* University Research and Technology
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* Corporation. All rights reserved.
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* Copyright (c) 2006 The Technical University of Chemnitz. All
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* rights reserved.
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*
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* Author(s): Torsten Hoefler <htor@cs.indiana.edu>
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*
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*/
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#ifndef __NBC_INTERNAL_H__
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#define __NBC_INTERNAL_H__
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#include "ompi_config.h"
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/* correct fortran bindings */
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#define NBC_F77_FUNC_ F77_FUNC_
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#include "mpi.h"
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#include "coll_libnbc.h"
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#include "ompi/include/ompi/constants.h"
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#include "ompi/request/request.h"
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#include <stdlib.h>
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#include <stdio.h>
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#include <stdarg.h>
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#include <assert.h>
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#include <math.h>
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#include <string.h>
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#include "libdict/dict.h"
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#ifdef __cplusplus
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extern "C" {
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#endif
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/* log(2) */
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#define LOG2 0.69314718055994530941
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/* true/false */
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#define true 1
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#define false 0
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/* all collectives */
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#define NBC_ALLGATHER 0
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#define NBC_ALLGATHERV 1
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#define NBC_ALLREDUCE 2
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#define NBC_ALLTOALL 3
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#define NBC_ALLTOALLV 4
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#define NBC_ALLTOALLW 5
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#define NBC_BARRIER 6
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#define NBC_BCAST 7
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#define NBC_EXSCAN 8
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#define NBC_GATHER 9
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#define NBC_GATHERV 10
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#define NBC_REDUCE 11
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#define NBC_REDUCESCAT 12
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#define NBC_SCAN 13
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#define NBC_SCATTER 14
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#define NBC_SCATTERV 15
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#define NBC_CART_SHIFT_XCHG 16
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#define NBC_NEIGHBOR_XCHG 17
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/* set the number of collectives in nbc.h !!!! */
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/* several typedefs for NBC */
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/* the function type enum */
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typedef enum {
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SEND,
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RECV,
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OP,
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COPY,
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UNPACK
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} NBC_Fn_type;
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/* the send argument struct */
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typedef struct {
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void *buf;
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char tmpbuf;
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int count;
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MPI_Datatype datatype;
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int dest;
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} NBC_Args_send;
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/* the receive argument struct */
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typedef struct {
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void *buf;
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char tmpbuf;
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int count;
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MPI_Datatype datatype;
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int source;
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} NBC_Args_recv;
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/* the operation argument struct */
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typedef struct {
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void *buf1;
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char tmpbuf1;
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void *buf2;
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char tmpbuf2;
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void *buf3;
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char tmpbuf3;
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int count;
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MPI_Op op;
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MPI_Datatype datatype;
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} NBC_Args_op;
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/* the copy argument struct */
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typedef struct {
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void *src;
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char tmpsrc;
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int srccount;
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MPI_Datatype srctype;
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void *tgt;
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char tmptgt;
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int tgtcount;
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MPI_Datatype tgttype;
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} NBC_Args_copy;
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/* unpack operation arguments */
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typedef struct {
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void *inbuf;
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char tmpinbuf;
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int count;
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MPI_Datatype datatype;
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void *outbuf;
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char tmpoutbuf;
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} NBC_Args_unpack;
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/* internal function prototypes */
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int NBC_Sched_create(NBC_Schedule* schedule);
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int NBC_Sched_send(void* buf, char tmpbuf, int count, MPI_Datatype datatype, int dest, NBC_Schedule *schedule);
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int NBC_Sched_recv(void* buf, char tmpbuf, int count, MPI_Datatype datatype, int source, NBC_Schedule *schedule);
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int NBC_Sched_op(void* buf3, char tmpbuf3, void* buf1, char tmpbuf1, void* buf2, char tmpbuf2, int count, MPI_Datatype datatype, MPI_Op op, NBC_Schedule *schedule);
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int NBC_Sched_copy(void *src, char tmpsrc, int srccount, MPI_Datatype srctype, void *tgt, char tmptgt, int tgtcount, MPI_Datatype tgttype, NBC_Schedule *schedule);
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int NBC_Sched_unpack(void *inbuf, char tmpinbuf, int count, MPI_Datatype datatype, void *outbuf, char tmpoutbuf, NBC_Schedule *schedule);
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int NBC_Sched_barrier(NBC_Schedule *schedule);
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int NBC_Sched_commit(NBC_Schedule *schedule);
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#ifdef NBC_CACHE_SCHEDULE
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/* this is a dummy structure which is used to get the schedule out of
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* the collop sepcific structure. The schedule pointer HAS to be at the
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* first position and should NOT BE REORDERED by the compiler (C
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* guarantees that */
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struct NBC_dummyarg {
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NBC_Schedule *schedule;
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};
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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int sendcount;
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MPI_Datatype sendtype;
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void* recvbuf;
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int recvcount;
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MPI_Datatype recvtype;
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} NBC_Alltoall_args;
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int NBC_Alltoall_args_compare(NBC_Alltoall_args *a, NBC_Alltoall_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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int sendcount;
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MPI_Datatype sendtype;
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void* recvbuf;
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int recvcount;
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MPI_Datatype recvtype;
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} NBC_Allgather_args;
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int NBC_Allgather_args_compare(NBC_Allgather_args *a, NBC_Allgather_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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void* recvbuf;
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int count;
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MPI_Datatype datatype;
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MPI_Op op;
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} NBC_Allreduce_args;
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int NBC_Allreduce_args_compare(NBC_Allreduce_args *a, NBC_Allreduce_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *buffer;
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int count;
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MPI_Datatype datatype;
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int root;
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} NBC_Bcast_args;
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int NBC_Bcast_args_compare(NBC_Bcast_args *a, NBC_Bcast_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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int sendcount;
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MPI_Datatype sendtype;
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void* recvbuf;
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int recvcount;
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MPI_Datatype recvtype;
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int root;
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} NBC_Gather_args;
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int NBC_Gather_args_compare(NBC_Gather_args *a, NBC_Gather_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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void* recvbuf;
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int count;
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MPI_Datatype datatype;
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MPI_Op op;
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int root;
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} NBC_Reduce_args;
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int NBC_Reduce_args_compare(NBC_Reduce_args *a, NBC_Reduce_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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void* recvbuf;
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int count;
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MPI_Datatype datatype;
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MPI_Op op;
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} NBC_Scan_args;
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int NBC_Scan_args_compare(NBC_Scan_args *a, NBC_Scan_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sendbuf;
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int sendcount;
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MPI_Datatype sendtype;
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void* recvbuf;
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int recvcount;
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MPI_Datatype recvtype;
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int root;
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} NBC_Scatter_args;
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int NBC_Scatter_args_compare(NBC_Scatter_args *a, NBC_Scatter_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sbuf;
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int scount;
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MPI_Datatype stype;
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void *rbuf;
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int rcount;
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MPI_Datatype rtype;
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int direction;
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int disp;
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MPI_Comm comm;
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} NBC_Icart_shift_xchg_args;
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int NBC_Icart_shift_xchg_args_compare(NBC_Icart_shift_xchg_args *a, NBC_Icart_shift_xchg_args *b, void *param);
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typedef struct {
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NBC_Schedule *schedule;
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void *sbuf;
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int scount;
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MPI_Datatype stype;
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void *rbuf;
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int rcount;
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MPI_Datatype rtype;
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MPI_Comm comm;
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} NBC_Ineighbor_xchg_args;
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int NBC_Ineighbor_xchg_args_compare(NBC_Ineighbor_xchg_args *a, NBC_Ineighbor_xchg_args *b, void *param);
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/* Schedule cache structures/functions */
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u_int32_t adler32(u_int32_t adler, int8_t *buf, int len);
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void NBC_SchedCache_args_delete(void *entry);
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void NBC_SchedCache_args_delete_key_dummy(void *k);
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#endif
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int NBC_Start(NBC_Handle *handle, NBC_Schedule *schedule);
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int NBC_Init_handle(struct ompi_communicator_t *comm, ompi_coll_libnbc_request_t **request, ompi_coll_libnbc_module_t *module);
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static inline int NBC_Type_intrinsic(MPI_Datatype type);
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static inline int NBC_Copy(void *src, int srccount, MPI_Datatype srctype, void *tgt, int tgtcount, MPI_Datatype tgttype, MPI_Comm comm);
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int NBC_Create_fortran_handle(int *fhandle, NBC_Handle **handle);
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/* some macros */
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/* a schedule has the following format:
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* [schedule] ::= [size][round-schedule][delimiter][round-schedule][delimiter]...[end]
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* [size] ::= size of the schedule (int)
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* [round-schedule] ::= [num][type][type-args][type][type-args]...
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* [num] ::= number of elements in round (int)
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* [type] ::= function type (NBC_Fn_type)
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* [type-args] ::= type specific arguments (NBC_Args_send, NBC_Args_recv or, NBC_Args_op)
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* [delimiter] ::= 1 (char) - indicates that a round follows
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* [end] ::= 0 (char) - indicates that this is the last round
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*/
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/* NBC_GET_ROUND_SIZE returns the size in bytes of a round of a NBC_Schedule
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* schedule. A round has the format:
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* [num]{[type][type-args]}
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* e.g. [(int)2][(NBC_Fn_type)SEND][(NBC_Args_send)SEND-ARGS][(NBC_Fn_type)RECV][(NBC_Args_recv)RECV-ARGS] */
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#define NBC_GET_ROUND_SIZE(schedule, size) \
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{ \
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int *numptr; \
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NBC_Fn_type *typeptr; \
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int i; \
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\
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numptr = (int*)schedule; \
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/*NBC_DEBUG(10, "GET_ROUND_SIZE got %i elements\n", *numptr); */\
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/* end is increased by sizeof(int) bytes to point to type */ \
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typeptr = (NBC_Fn_type*)((int*)(schedule)+1); \
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for (i=0; i<*numptr; i++) { \
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/* go sizeof op-data forward */ \
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switch(*typeptr) { \
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case SEND: \
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/*printf("found a SEND at offset %i\n", (int)typeptr-(int)schedule); */\
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typeptr = (NBC_Fn_type*)((NBC_Args_send*)typeptr+1); \
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break; \
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case RECV: \
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/*printf("found a RECV at offset %i\n", (int)typeptr-(int)schedule); */\
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typeptr = (NBC_Fn_type*)((NBC_Args_recv*)typeptr+1); \
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break; \
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case OP: \
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/*printf("found a OP at offset %i\n", (int)typeptr-(int)schedule); */\
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typeptr = (NBC_Fn_type*)((NBC_Args_op*)typeptr+1); \
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break; \
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case COPY: \
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/*printf("found a COPY at offset %i\n", (int)typeptr-(int)schedule); */\
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typeptr = (NBC_Fn_type*)((NBC_Args_copy*)typeptr+1); \
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break; \
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case UNPACK: \
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/*printf("found a UNPACK at offset %i\n", (int)typeptr-(int)schedule); */\
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typeptr = (NBC_Fn_type*)((NBC_Args_unpack*)typeptr+1); \
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break; \
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default: \
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printf("NBC_GET_ROUND_SIZE: bad type %li at offset %li\n", (long)*typeptr, (long)typeptr-(long)schedule); \
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return NBC_BAD_SCHED; \
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} \
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/* increase ptr by size of fn_type enum */ \
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typeptr = (NBC_Fn_type*)((NBC_Fn_type*)typeptr+1); \
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} \
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/* this could be optimized if typeptr would be used directly */ \
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size = (long)typeptr-(long)schedule; \
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}
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/* returns the size of a schedule in bytes */
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#define NBC_GET_SIZE(schedule, size) \
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{ \
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size=*(int*)schedule; \
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}
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/* increase the size of a schedule by size bytes */
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#define NBC_INC_SIZE(schedule, size) \
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{ \
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*(int*)schedule+=size; \
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}
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/* increments the number of operations in the last round */
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#define NBC_INC_NUM_ROUND(schedule) \
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{ \
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int total_size; \
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long round_size; \
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char *ptr, *lastround; \
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\
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NBC_GET_SIZE(schedule, total_size); \
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\
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/* ptr begins at first round (first int is overall size) */ \
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ptr = (char*)((char*)schedule+sizeof(int)); \
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lastround = ptr; \
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while ((long)ptr-(long)schedule < total_size) { \
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NBC_GET_ROUND_SIZE(ptr, round_size); \
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/*printf("got round size %i\n", round_size);*/ \
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lastround = ptr; \
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/* add round size */ \
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ptr=ptr+round_size; \
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/* add sizeof(char) as barrier delimiter */ \
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ptr=ptr+sizeof(char); \
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/*printf("(int)ptr-(int)schedule=%i, size=%i\n", (int)ptr-(int)schedule, size); */\
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} \
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/*printf("lastround count is at offset: %i\n", (int)lastround-(int)schedule);*/ \
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/* this is the count in the last round of the schedule */ \
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(*(int*)lastround)++; \
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}
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/* NBC_PRINT_ROUND prints a round in a schedule. A round has the format:
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* [num]{[op][op-data]} types: [int]{[enum][op-type]}
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* e.g. [2][SEND][SEND-ARGS][RECV][RECV-ARGS] */
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#define NBC_PRINT_ROUND(schedule) \
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{ \
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int myrank, *numptr; \
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NBC_Fn_type *typeptr; \
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NBC_Args_send *sendargs; \
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NBC_Args_recv *recvargs; \
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NBC_Args_op *opargs; \
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NBC_Args_copy *copyargs; \
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NBC_Args_unpack *unpackargs; \
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int i; \
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\
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numptr = (int*)schedule; \
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MPI_Comm_rank(MPI_COMM_WORLD, &myrank); \
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printf("has %i actions: \n", *numptr); \
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/* end is increased by sizeof(int) bytes to point to type */ \
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typeptr = (NBC_Fn_type*)((int*)(schedule)+1); \
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for (i=0; i<*numptr; i++) { \
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/* go sizeof op-data forward */ \
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switch(*typeptr) { \
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case SEND: \
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printf("[%i] SEND (offset %li) ", myrank, (long)typeptr-(long)schedule); \
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sendargs = (NBC_Args_send*)(typeptr+1); \
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printf("*buf: %lu, count: %i, type: %lu, dest: %i)\n", (unsigned long)sendargs->buf, sendargs->count, (unsigned long)sendargs->datatype, sendargs->dest); \
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typeptr = (NBC_Fn_type*)((NBC_Args_send*)typeptr+1); \
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break; \
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case RECV: \
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printf("[%i] RECV (offset %li) ", myrank, (long)typeptr-(long)schedule); \
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recvargs = (NBC_Args_recv*)(typeptr+1); \
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printf("*buf: %lu, count: %i, type: %lu, source: %i)\n", (unsigned long)recvargs->buf, recvargs->count, (unsigned long)recvargs->datatype, recvargs->source); \
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typeptr = (NBC_Fn_type*)((NBC_Args_recv*)typeptr+1); \
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break; \
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case OP: \
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printf("[%i] OP (offset %li) ", myrank, (long)typeptr-(long)schedule); \
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opargs = (NBC_Args_op*)(typeptr+1); \
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printf("*buf1: %lu, buf2: %lu, count: %i, type: %lu)\n", (unsigned long)opargs->buf1, (unsigned long)opargs->buf2, opargs->count, (unsigned long)opargs->datatype); \
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typeptr = (NBC_Fn_type*)((NBC_Args_op*)typeptr+1); \
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break; \
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case COPY: \
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printf("[%i] COPY (offset %li) ", myrank, (long)typeptr-(long)schedule); \
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copyargs = (NBC_Args_copy*)(typeptr+1); \
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printf("*src: %lu, srccount: %i, srctype: %lu, *tgt: %lu, tgtcount: %i, tgttype: %lu)\n", (unsigned long)copyargs->src, copyargs->srccount, (unsigned long)copyargs->srctype, (unsigned long)copyargs->tgt, copyargs->tgtcount, (unsigned long)copyargs->tgttype); \
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typeptr = (NBC_Fn_type*)((NBC_Args_copy*)typeptr+1); \
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break; \
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case UNPACK: \
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printf("[%i] UNPACK (offset %li) ", myrank, (long)typeptr-(long)schedule); \
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unpackargs = (NBC_Args_unpack*)(typeptr+1); \
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printf("*src: %lu, srccount: %i, srctype: %lu, *tgt: %lu\n",(unsigned long)unpackargs->inbuf, unpackargs->count, (unsigned long)unpackargs->datatype, (unsigned long)unpackargs->outbuf); \
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typeptr = (NBC_Fn_type*)((NBC_Args_unpack*)typeptr+1); \
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break; \
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default: \
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printf("[%i] NBC_PRINT_ROUND: bad type %li at offset %li\n", myrank, (long)*typeptr, (long)typeptr-(long)schedule); \
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return NBC_BAD_SCHED; \
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} \
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/* increase ptr by size of fn_type enum */ \
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typeptr = (NBC_Fn_type*)((NBC_Fn_type*)typeptr+1); \
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} \
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printf("\n"); \
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}
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#define NBC_PRINT_SCHED(schedule) \
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{ \
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int size, myrank; \
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long round_size; \
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char *ptr; \
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\
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NBC_GET_SIZE(schedule, size); \
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MPI_Comm_rank(MPI_COMM_WORLD, &myrank); \
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printf("[%i] printing schedule of size %i\n", myrank, size); \
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\
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/* ptr begins at first round (first int is overall size) */ \
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ptr = (char*)((char*)schedule+sizeof(int)); \
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while ((long)ptr-(long)schedule < size) { \
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NBC_GET_ROUND_SIZE(ptr, round_size); \
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printf("[%i] Round at byte %li (size %li) ", myrank, (long)ptr-(long)schedule, round_size); \
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NBC_PRINT_ROUND(ptr); \
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/* add round size */ \
|
|
ptr=ptr+round_size; \
|
|
/* add sizeof(char) as barrier delimiter */ \
|
|
ptr=ptr+sizeof(char); \
|
|
} \
|
|
}
|
|
|
|
#define NBC_CHECK_NULL(ptr) \
|
|
{ \
|
|
if(ptr == NULL) { \
|
|
printf("realloc error :-(\n"); \
|
|
} \
|
|
}
|
|
|
|
|
|
|
|
/*
|
|
#define NBC_DEBUG(level, ...) {}
|
|
*/
|
|
|
|
static inline void NBC_DEBUG(int level, const char *fmt, ...)
|
|
{
|
|
#if NBC_DLEVEL > 0
|
|
va_list ap;
|
|
int rank;
|
|
|
|
if(NBC_DLEVEL >= level) {
|
|
MPI_Comm_rank(MPI_COMM_WORLD, &rank);
|
|
|
|
printf("[LibNBC - %i] ", rank);
|
|
va_start(ap, fmt);
|
|
vprintf(fmt, ap);
|
|
va_end (ap);
|
|
}
|
|
#endif
|
|
}
|
|
|
|
/* returns true (1) or false (0) if type is intrinsic or not */
|
|
static inline int NBC_Type_intrinsic(MPI_Datatype type) {
|
|
|
|
if( ( type == MPI_INT ) ||
|
|
( type == MPI_LONG ) ||
|
|
( type == MPI_SHORT ) ||
|
|
( type == MPI_UNSIGNED ) ||
|
|
( type == MPI_UNSIGNED_SHORT ) ||
|
|
( type == MPI_UNSIGNED_LONG ) ||
|
|
( type == MPI_FLOAT ) ||
|
|
( type == MPI_DOUBLE ) ||
|
|
( type == MPI_LONG_DOUBLE ) ||
|
|
( type == MPI_BYTE ) ||
|
|
( type == MPI_FLOAT_INT) ||
|
|
( type == MPI_DOUBLE_INT) ||
|
|
( type == MPI_LONG_INT) ||
|
|
( type == MPI_2INT) ||
|
|
( type == MPI_SHORT_INT) ||
|
|
( type == MPI_LONG_DOUBLE_INT))
|
|
return 1;
|
|
else
|
|
return 0;
|
|
}
|
|
|
|
/* let's give a try to inline functions */
|
|
static inline int NBC_Copy(void *src, int srccount, MPI_Datatype srctype, void *tgt, int tgtcount, MPI_Datatype tgttype, MPI_Comm comm) {
|
|
int size, pos, res;
|
|
MPI_Aint ext;
|
|
void *packbuf;
|
|
|
|
if((srctype == tgttype) && NBC_Type_intrinsic(srctype)) {
|
|
/* if we have the same types and they are contiguous (intrinsic
|
|
* types are contiguous), we can just use a single memcpy */
|
|
res = MPI_Type_extent(srctype, &ext);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
|
|
memcpy(tgt, src, srccount*ext);
|
|
} else {
|
|
/* we have to pack and unpack */
|
|
res = MPI_Pack_size(srccount, srctype, comm, &size);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack_size() (%i)\n", res); return res; }
|
|
packbuf = malloc(size);
|
|
if (NULL == packbuf) { printf("Error in malloc()\n"); return res; }
|
|
pos=0;
|
|
res = MPI_Pack(src, srccount, srctype, packbuf, size, &pos, comm);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack() (%i)\n", res); return res; }
|
|
pos=0;
|
|
res = MPI_Unpack(packbuf, size, &pos, tgt, tgtcount, tgttype, comm);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Unpack() (%i)\n", res); return res; }
|
|
free(packbuf);
|
|
}
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
static inline int NBC_Unpack(void *src, int srccount, MPI_Datatype srctype, void *tgt, MPI_Comm comm) {
|
|
int size, pos, res;
|
|
MPI_Aint ext;
|
|
|
|
if(NBC_Type_intrinsic(srctype)) {
|
|
/* if we have the same types and they are contiguous (intrinsic
|
|
* types are contiguous), we can just use a single memcpy */
|
|
res = MPI_Type_extent(srctype, &ext);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; }
|
|
memcpy(tgt, src, srccount*ext);
|
|
|
|
} else {
|
|
/* we have to unpack */
|
|
res = MPI_Pack_size(srccount, srctype, comm, &size);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack_size() (%i)\n", res); return res; }
|
|
pos=0;
|
|
res = MPI_Unpack(src, size, &pos, tgt, srccount, srctype, comm);
|
|
if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Unpack() (%i)\n", res); return res; }
|
|
}
|
|
|
|
return NBC_OK;
|
|
}
|
|
|
|
/* deletes elements from dict until low watermark is reached */
|
|
static inline void NBC_SchedCache_dictwipe(hb_tree *dict, int *size) {
|
|
hb_itor *itor;
|
|
|
|
itor = hb_itor_new(dict);
|
|
for (; hb_itor_valid(itor) && (*size>NBC_SCHED_DICT_LOWER); hb_itor_next(itor)) {
|
|
hb_tree_remove(dict, hb_itor_key(itor), 0);
|
|
*size = *size-1;
|
|
}
|
|
hb_itor_destroy(itor);
|
|
}
|
|
|
|
#define NBC_IN_PLACE(sendbuf, recvbuf, inplace) \
|
|
{ \
|
|
inplace = 0; \
|
|
if(recvbuf == sendbuf) { \
|
|
inplace = 1; \
|
|
} else \
|
|
if(sendbuf == MPI_IN_PLACE) { \
|
|
sendbuf = recvbuf; \
|
|
inplace = 1; \
|
|
} else \
|
|
if(recvbuf == MPI_IN_PLACE) { \
|
|
recvbuf = sendbuf; \
|
|
inplace = 1; \
|
|
} \
|
|
}
|
|
|
|
#ifdef __cplusplus
|
|
}
|
|
#endif
|
|
|
|
#endif
|
|
|
|
|