/* * Copyright (c) 2006 The Trustees of Indiana University and Indiana * University Research and Technology * Corporation. All rights reserved. * Copyright (c) 2006 The Technical University of Chemnitz. All * rights reserved. * Copyright (c) 2013 Los Alamos National Security, LLC. All rights * reserved. * * Author(s): Torsten Hoefler * */ #include "nbc_internal.h" static inline int a2a_sched_linear(int rank, int p, MPI_Aint sndext, MPI_Aint rcvext, NBC_Schedule *schedule, void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); static inline int a2a_sched_pairwise(int rank, int p, MPI_Aint sndext, MPI_Aint rcvext, NBC_Schedule *schedule, void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); static inline int a2a_sched_diss(int rank, int p, MPI_Aint sndext, MPI_Aint rcvext, NBC_Schedule* schedule, void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, NBC_Handle *handle); #ifdef NBC_CACHE_SCHEDULE /* tree comparison function for schedule cache */ int NBC_Alltoall_args_compare(NBC_Alltoall_args *a, NBC_Alltoall_args *b, void *param) { if( (a->sendbuf == b->sendbuf) && (a->sendcount == b->sendcount) && (a->sendtype == b->sendtype) && (a->recvbuf == b->recvbuf) && (a->recvcount == b->recvcount) && (a->recvtype == b->recvtype) ) { return 0; } if( a->sendbuf < b->sendbuf ) { return -1; } return +1; } #endif /* simple linear MPI_Ialltoall the (simple) algorithm just sends to all nodes */ int ompi_coll_libnbc_ialltoall(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request, struct mca_coll_base_module_2_0_0_t *module) { int rank, p, res, a2asize, sndsize, datasize; NBC_Schedule *schedule; MPI_Aint rcvext, sndext; #ifdef NBC_CACHE_SCHEDULE NBC_Alltoall_args *args, *found, search; #endif char *rbuf, *sbuf, inplace; enum {NBC_A2A_LINEAR, NBC_A2A_PAIRWISE, NBC_A2A_DISS} alg; NBC_Handle *handle; ompi_coll_libnbc_request_t **coll_req = (ompi_coll_libnbc_request_t**) request; ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module; NBC_IN_PLACE(sendbuf, recvbuf, inplace); res = NBC_Init_handle(comm, coll_req, libnbc_module); if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; } handle = (*coll_req); res = MPI_Comm_rank(comm, &rank); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; } res = MPI_Comm_size(comm, &p); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_size() (%i)\n", res); return res; } res = MPI_Type_extent(sendtype, &sndext); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; } res = MPI_Type_extent(recvtype, &rcvext); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; } res = MPI_Type_size(sendtype, &sndsize); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_size() (%i)\n", res); return res; } /* algorithm selection */ a2asize = sndsize*sendcount*p; /* this number is optimized for TCP on odin.cs.indiana.edu */ if((p <= 8) && ((a2asize < 1<<17) || (sndsize*sendcount < 1<<12))) { /* just send as fast as we can if we have less than 8 peers, if the * total communicated size is smaller than 1<<17 *and* if we don't * have eager messages (msgsize < 1<<13) */ alg = NBC_A2A_LINEAR; } else if(a2asize < (1<<12)*p) { /*alg = NBC_A2A_DISS;*/ alg = NBC_A2A_LINEAR; } else alg = NBC_A2A_LINEAR; /*NBC_A2A_PAIRWISE;*/ if(!inplace) { /* copy my data to receive buffer */ rbuf = ((char *)recvbuf) + (rank*recvcount*rcvext); sbuf = ((char *)sendbuf) + (rank*sendcount*sndext); res = NBC_Copy(sbuf, sendcount, sendtype, rbuf, recvcount, recvtype, comm); if (NBC_OK != res) { printf("Error in NBC_Copy() (%i)\n", res); return res; } } /* allocate temp buffer if we need one */ if(alg == NBC_A2A_DISS) { /* only A2A_DISS needs buffers */ if(NBC_Type_intrinsic(sendtype)) { datasize = sndext*sendcount; } else { res = MPI_Pack_size(sendcount, sendtype, comm, &datasize); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack_size() (%i)\n", res); return res; } } /* allocate temporary buffers */ if(p % 2 == 0) { handle->tmpbuf=malloc(datasize*p*2); } else { /* we cannot divide p by two, so alloc more to be safe ... */ handle->tmpbuf=malloc(datasize*(p/2+1)*2*2); } /* phase 1 - rotate n data blocks upwards into the tmpbuffer */ if(NBC_Type_intrinsic(sendtype)) { /* contiguous - just copy (1st copy) */ memcpy(handle->tmpbuf, (char*)sendbuf+datasize*rank, datasize*(p-rank)); if(rank != 0) memcpy((char*)handle->tmpbuf+datasize*(p-rank), sendbuf, datasize*(rank)); } else { int pos=0; /* non-contiguous - pack */ res = MPI_Pack((char*)sendbuf+rank*sendcount*sndext, (p-rank)*sendcount, sendtype, handle->tmpbuf, (p-rank)*datasize, &pos, comm); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack() (%i)\n", res); return res; } if(rank != 0) { pos = 0; MPI_Pack(sendbuf, rank*sendcount, sendtype, (char*)handle->tmpbuf+datasize*(p-rank), rank*datasize, &pos, comm); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack() (%i)\n", res); return res; } } } } else { handle->tmpbuf=NULL; } #ifdef NBC_CACHE_SCHEDULE /* search schedule in communicator specific tree */ search.sendbuf=sendbuf; search.sendcount=sendcount; search.sendtype=sendtype; search.recvbuf=recvbuf; search.recvcount=recvcount; search.recvtype=recvtype; found = (NBC_Alltoall_args*)hb_tree_search((hb_tree*)handle->comminfo->NBC_Dict[NBC_ALLTOALL], &search); if(found == NULL) { #endif /* not found - generate new schedule */ schedule = (NBC_Schedule*)malloc(sizeof(NBC_Schedule)); if (NULL == schedule) { printf("Error in malloc()\n"); return res; } res = NBC_Sched_create(schedule); if(res != NBC_OK) { printf("Error in NBC_Sched_create (%i)\n", res); return res; } switch(alg) { case NBC_A2A_LINEAR: res = a2a_sched_linear(rank, p, sndext, rcvext, schedule, sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm); break; case NBC_A2A_DISS: res = a2a_sched_diss(rank, p, sndext, rcvext, schedule, sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm, handle); break; case NBC_A2A_PAIRWISE: res = a2a_sched_pairwise(rank, p, sndext, rcvext, schedule, sendbuf, sendcount, sendtype, recvbuf, recvcount, recvtype, comm); break; } if (NBC_OK != res) { return res; } res = NBC_Sched_commit(schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_commit() (%i)\n", res); return res; } #ifdef NBC_CACHE_SCHEDULE /* save schedule to tree */ args = (NBC_Alltoall_args*)malloc(sizeof(NBC_Alltoall_args)); args->sendbuf=sendbuf; args->sendcount=sendcount; args->sendtype=sendtype; args->recvbuf=recvbuf; args->recvcount=recvcount; args->recvtype=recvtype; args->schedule=schedule; res = hb_tree_insert ((hb_tree*)handle->comminfo->NBC_Dict[NBC_ALLTOALL], args, args, 0); if(res != 0) printf("error in dict_insert() (%i)\n", res); /* increase number of elements for A2A */ if(++handle->comminfo->NBC_Dict_size[NBC_ALLTOALL] > NBC_SCHED_DICT_UPPER) { NBC_SchedCache_dictwipe((hb_tree*)handle->comminfo->NBC_Dict[NBC_ALLTOALL], &handle->comminfo->NBC_Dict_size[NBC_ALLTOALL]); /*if(!rank) printf("[%i] removing %i elements - new size: %i \n", rank, SCHED_DICT_UPPER-SCHED_DICT_LOWER, handle->comminfo->NBC_Alltoall_size);*/ } /*if(!rank) printf("[%i] added new schedule to tree - number %i\n", rank, handle->comminfo->NBC_Dict_size[NBC_ALLTOALL]);*/ } else { /* found schedule */ schedule=found->schedule; } #endif res = NBC_Start(handle, schedule); if (NBC_OK != res) { printf("Error in NBC_Start() (%i)\n", res); return res; } return NBC_OK; } int ompi_coll_libnbc_ialltoall_inter (void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, struct ompi_communicator_t *comm, ompi_request_t ** request, struct mca_coll_base_module_2_0_0_t *module) { int rank, res, i, rsize; MPI_Aint sndext, rcvext; NBC_Schedule *schedule; char *rbuf, *sbuf; NBC_Handle *handle; ompi_coll_libnbc_request_t **coll_req = (ompi_coll_libnbc_request_t**) request; ompi_coll_libnbc_module_t *libnbc_module = (ompi_coll_libnbc_module_t*) module; res = NBC_Init_handle(comm, coll_req, libnbc_module); if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; } handle = (*coll_req); res = MPI_Comm_remote_size (comm, &rsize); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_remote_size() (%i)\n", res); return res; } res = MPI_Comm_rank(comm, &rank); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; } res = MPI_Type_extent(sendtype, &sndext); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; } res = MPI_Type_extent(recvtype, &rcvext); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; } schedule = (NBC_Schedule*)malloc(sizeof(NBC_Schedule)); if (NULL == schedule) { printf("Error in malloc() (%i)\n", res); return res; } handle->tmpbuf=NULL; res = NBC_Sched_create(schedule); if(res != NBC_OK) { printf("Error in NBC_Sched_create (%i)\n", res); return res; } for (i = 0; i < rsize; i++) { /* post all sends */ sbuf = ((char *) sendbuf) + (i * sendcount * sndext); res = NBC_Sched_send(sbuf, false, sendcount, sendtype, i, schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; } /* post all receives */ rbuf = ((char *) recvbuf) + (i * recvcount * rcvext); res = NBC_Sched_recv(rbuf, false, recvcount, recvtype, i, schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_recv() (%i)\n", res); return res; } } /*NBC_PRINT_SCHED(*schedule);*/ res = NBC_Sched_commit(schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_commit() (%i)\n", res); return res; } res = NBC_Start(handle, schedule); if (NBC_OK != res) { printf("Error in NBC_Start() (%i)\n", res); return res; } return NBC_OK; } static inline int a2a_sched_pairwise(int rank, int p, MPI_Aint sndext, MPI_Aint rcvext, NBC_Schedule* schedule, void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm) { int res, r, sndpeer, rcvpeer; char *rbuf, *sbuf; res = NBC_OK; if(p < 2) return res; for(r=1;rtmpbuf+datasize*p; stmpbuf = (char*)handle->tmpbuf+datasize*(p+p/2); } else { /* we cannot divide p by two, so alloc more to be safe ... */ virtp = (p/2+1)*2; rtmpbuf = (char*)handle->tmpbuf+datasize*p; stmpbuf = (char*)handle->tmpbuf+datasize*(p+virtp/2); } /* phase 2 - communicate */ /*printf("[%i] temp buffer is at %lu of size %i, maxround: %i\n", rank, (unsigned long)handle->tmpbuf, (int)datasize*p*(1<tmpbuf, true, datasize, MPI_BYTE, schedule); offset += datasize; } } speer = ( rank + r) % p; /* add p because modulo does not work with negative values */ rpeer = ((rank - r)+p) % p; /*printf("[%i] receiving %i bytes from host %i into rbuf %lu\n", rank, offset, rpeer, (unsigned long)rtmpbuf);*/ res = NBC_Sched_recv(rtmpbuf-(unsigned long)handle->tmpbuf, true, offset, MPI_BYTE, rpeer, schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_recv() (%i)\n", res); return res; } /*printf("[%i] sending %i bytes to host %i from sbuf %lu\n", rank, offset, speer, (unsigned long)stmpbuf);*/ res = NBC_Sched_send(stmpbuf-(unsigned long)handle->tmpbuf, true, offset, MPI_BYTE, speer, schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_send() (%i)\n", res); return res; } res = NBC_Sched_barrier(schedule); if (NBC_OK != res) { printf("Error in NBC_Sched_barrier() (%i)\n", res); return res; } /* unpack from buffer */ offset = 0; for(i=1; itmpbuf, true, datasize, MPI_BYTE, (void*)(long)(i*datasize), true, datasize, MPI_BYTE, schedule); offset += datasize; } } } /* phase 3 - reorder - data is now in wrong order in handle->tmpbuf - * reorder it into recvbuf */ for(i=0; i