/* * Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana * University Research and Technology * Corporation. All rights reserved. * Copyright (c) 2004-2011 The University of Tennessee and The University * of Tennessee Research Foundation. All rights * reserved. * Copyright (c) 2004-2005 High Performance Computing Center Stuttgart, * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. * Copyright (c) 2008-2014 University of Houston. All rights reserved. * $COPYRIGHT$ * * Additional copyrights may follow * * $HEADER$ */ #include "ompi_config.h" #include "fbtl_plfs.h" #include "mpi.h" #include #include "ompi/constants.h" #include "ompi/mca/fbtl/fbtl.h" ssize_t mca_fbtl_plfs_preadv (mca_io_ompio_file_t *fh ) { Plfs_fd *pfd = NULL; plfs_error_t plfs_ret; pfd = fh->f_fs_ptr; ssize_t total_bytes_read=0; int i, block=1; struct iovec *iov = NULL; int iov_count = 0; OMPI_MPI_OFFSET_TYPE iov_offset = 0; if (NULL == fh->f_io_array) { return OMPI_ERROR; } iov = (struct iovec *) malloc (OMPIO_IOVEC_INITIAL_SIZE * sizeof (struct iovec)); if (NULL == iov) { opal_output(1, "OUT OF MEMORY\n"); return OMPI_ERR_OUT_OF_RESOURCE; } for (i=0 ; if_num_of_io_entries ; i++) { if (0 == iov_count) { iov[iov_count].iov_base = fh->f_io_array[i].memory_address; iov[iov_count].iov_len = fh->f_io_array[i].length; iov_offset = (OMPI_MPI_OFFSET_TYPE)(intptr_t)fh->f_io_array[i].offset; iov_count ++; } if (OMPIO_IOVEC_INITIAL_SIZE*block <= iov_count) { block ++; iov = (struct iovec *)realloc (iov, OMPIO_IOVEC_INITIAL_SIZE * block * sizeof(struct iovec)); if (NULL == iov) { opal_output(1, "OUT OF MEMORY\n"); return OMPI_ERR_OUT_OF_RESOURCE; } } if (fh->f_num_of_io_entries != i+1) { if (((OMPI_MPI_OFFSET_TYPE)(intptr_t)fh->f_io_array[i].offset + (OPAL_PTRDIFF_TYPE)fh->f_io_array[i].length) == (OMPI_MPI_OFFSET_TYPE)(intptr_t)fh->f_io_array[i+1].offset) { iov[iov_count].iov_base = fh->f_io_array[i+1].memory_address; iov[iov_count].iov_len = fh->f_io_array[i+1].length; iov_count ++; continue; } } // Find the total number of bytes to be read. size_t bytes = 0; for (int i = 0; i < iov_count; ++i) { bytes += iov[i].iov_len; } // Allocate a temporary buffer to hold the data char *buffer; buffer = (char *) malloc (bytes); if (buffer == NULL) { return OMPI_ERROR; } // Read the data ssize_t bytes_read; plfs_ret = plfs_read( pfd, buffer, bytes, iov_offset, &bytes_read ); if (PLFS_SUCCESS != plfs_ret) { opal_output(0, "fbtl_plfs_preadv: Error in plfs_read:\n%s\n", strplfserr(plfs_ret)); return OMPI_ERROR; } if (bytes_read < 0) return OMPI_ERROR; total_bytes_read += bytes_read; // Copy the data from BUFFER into the memory specified by IOV bytes = bytes_read; for (int i = 0; i < iov_count; ++i) { size_t copy = MIN (iov[i].iov_len, bytes); (void) memcpy ((void *) iov[i].iov_base, (void *) buffer, copy); buffer += copy; bytes -= copy; if (bytes == 0) { break; } } iov_count = 0; if ( NULL != buffer ) { free (buffer); buffer=NULL; } } if (NULL != iov) { free (iov); iov = NULL; } return total_bytes_read; }