/* * Copyright (c) 2006 The Trustees of Indiana University and Indiana * University Research and Technology * Corporation. All rights reserved. * Copyright (c) 2006 The Technical University of Chemnitz. All * rights reserved. * * Author(s): Torsten Hoefler * */ #include "nbc_internal.h" #ifdef NBC_CACHE_SCHEDULE /* tree comparison function for schedule cache */ int NBC_Allgather_args_compare(NBC_Allgather_args *a, NBC_Allgather_args *b, void *param) { if( (a->sendbuf == b->sendbuf) && (a->sendcount == b->sendcount) && (a->sendtype == b->sendtype) && (a->recvbuf == b->recvbuf) && (a->recvcount == b->recvcount) && (a->recvtype == b->recvtype) ) { return 0; } if( a->sendbuf < b->sendbuf ) { return -1; } return +1; } #endif #ifdef HAVE_SYS_WEAK_ALIAS_PRAGMA #pragma weak NBC_Iallgather=PNBC_Iallgather #define NBC_Iallgather PNBC_Iallgather #endif /* simple linear MPI_Iallgather * the algorithm uses p-1 rounds * each node sends the packet it received last round (or has in round 0) to it's right neighbor (modulo p) * each node receives from it's left (modulo p) neighbor */ int NBC_Iallgather(void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, NBC_Handle *handle) { int rank, p, res, r; MPI_Aint rcvext, sndext; NBC_Schedule *schedule; char *rbuf, *sbuf, inplace; #ifdef NBC_CACHE_SCHEDULE NBC_Allgather_args *args, *found, search; #endif NBC_IN_PLACE(sendbuf, recvbuf, inplace); res = NBC_Init_handle(handle, comm); if(res != NBC_OK) { printf("Error in NBC_Init_handle(%i)\n", res); return res; } res = MPI_Comm_rank(comm, &rank); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_rank() (%i)\n", res); return res; } res = MPI_Comm_size(comm, &p); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Comm_size() (%i)\n", res); return res; } res = MPI_Type_extent(sendtype, &sndext); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; } res = MPI_Type_extent(recvtype, &rcvext); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Type_extent() (%i)\n", res); return res; } handle->tmpbuf = NULL; if(!((rank == 0) && inplace)) { /* copy my data to receive buffer */ rbuf = ((char *)recvbuf) + (rank*recvcount*rcvext); res = NBC_Copy(sendbuf, sendcount, sendtype, rbuf, recvcount, recvtype, comm); if (NBC_OK != res) { printf("Error in NBC_Copy() (%i)\n", res); return res; } } #ifdef NBC_CACHE_SCHEDULE /* search schedule in communicator specific tree */ search.sendbuf=sendbuf; search.sendcount=sendcount; search.sendtype=sendtype; search.recvbuf=recvbuf; search.recvcount=recvcount; search.recvtype=recvtype; found = (NBC_Allgather_args *)hb_tree_search((hb_tree*)handle->comminfo->NBC_Dict[NBC_ALLGATHER], &search); if(found == NULL) { #endif schedule = (NBC_Schedule*)malloc(sizeof(NBC_Schedule)); if (NULL == schedule) { printf("Error in malloc()\n"); return res; } res = NBC_Sched_create(schedule); if(NBC_OK != res) { printf("Error in NBC_Sched_create, (%i)\n", res); return res; } sbuf = ((char *)recvbuf) + (rank*recvcount*rcvext); /* do p-1 rounds */ for(r=0;rsendbuf=sendbuf; args->sendcount=sendcount; args->sendtype=sendtype; args->recvbuf=recvbuf; args->recvcount=recvcount; args->recvtype=recvtype; args->schedule=schedule; res = hb_tree_insert ((hb_tree*)handle->comminfo->NBC_Dict[NBC_ALLGATHER], args, args, 0); if(res != 0) printf("error in dict_insert() (%i)\n", res); /* increase number of elements for A2A */ if(++handle->comminfo->NBC_Dict_size[NBC_ALLGATHER] > NBC_SCHED_DICT_UPPER) { NBC_SchedCache_dictwipe((hb_tree*)handle->comminfo->NBC_Dict[NBC_ALLGATHER], &handle->comminfo->NBC_Dict_size[NBC_ALLGATHER]); } } else { /* found schedule */ schedule=found->schedule; } #endif /*NBC_PRINT_SCHED(*schedule);*/ res = NBC_Start(handle, schedule); if (NBC_OK != res) { printf("Error in NBC_Start() (%i)\n", res); return res; } return NBC_OK; } /* this is a new possible dissemination based allgather algorithm - we should * try it some time (big comm, small data) */ #if 0 static inline void diss_unpack(int rank, int vrank, int round, int p, int *pos, void *tmpbuf, int datasize, int slotsize, void *recvbuf, int sendcount, MPI_Datatype sendtype, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, NBC_Schedule *schedule) { int r, res; char *sbuf, *rbuf; sbuf = (char *)tmpbuf + (*pos*datasize); rbuf = (char *)recvbuf + (vrank*slotsize); printf("[%i] unpacking tmpbuf pos: %i (%lu) to rbuf elem: %i (%lu) - %i elems, datasize %i\n", rank, *pos, (unsigned long)sbuf, vrank, (unsigned long)rbuf, recvcount, datasize); res = NBC_Sched_unpack(sbuf, recvcount, recvtype, rbuf, schedule); if (NBC_OK != res) { printf("Error in NBC_Unpack() (%i)\n", res); } *pos=*pos+1; for(r=0; r<=round; r++) { if(r != 0) { diss_unpack(rank, (vrank-(1<<(r-1))+p)%p, r-1, p, pos, tmpbuf, datasize, slotsize, recvbuf, sendcount, sendtype, recvcount, recvtype, comm, schedule); } } } static inline int a2a_sched_diss(int rank, int p, MPI_Aint sndext, MPI_Aint rcvext, NBC_Schedule* schedule, void* sendbuf, int sendcount, MPI_Datatype sendtype, void* recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm, NBC_Handle *handle) { int res, r, maxround, size, speer, rpeer, pos, datasize; char *sbuf, *rbuf; res = NBC_OK; if(p < 2) return res; maxround = (int)ceil((log(p)/LOG2)); if(NBC_Type_intrinsic(sendtype)) { datasize = sndext*sendcount; } else { res = MPI_Pack_size(sendcount, sendtype, comm, &datasize); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack_size() (%i)\n", res); return res; } } /* tmpbuf is probably bigger than p -> next power of 2 */ handle->tmpbuf=malloc(datasize*(1<tmpbuf, sbuf, datasize); } else { pos = 0; res = MPI_Pack(sbuf, sendcount, sendtype, handle->tmpbuf, datasize, &pos, comm); if (MPI_SUCCESS != res) { printf("MPI Error in MPI_Pack() (%i)\n", res); return res; } } printf("[%i] receive buffer is at %lu of size %i, maxround: %i\n", rank, (unsigned long)handle->tmpbuf, (int)sndext*sendcount*(1<tmpbuf+size; sbuf = (char*)handle->tmpbuf; speer = (rank + (1<tmpbuf, datasize, recvcount*rcvext, recvbuf, sendcount, sendtype, recvcount, recvtype, comm, schedule); return NBC_OK; } #endif #ifdef __cplusplus extern "C" { #endif /* Fortran bindings */ #ifdef HAVE_SYS_WEAK_ALIAS_PRAGMA NBC_F77_ALLFUNC_(nbc_iallgather,NBC_IALLGATHER,(void *sendbuf, int *sendcount, int *sendtype, void *recvbuf, int *recvcount, int *recvtype, int *fcomm, int *fhandle, int *ierr)); #pragma weak NBC_IALLGATHER = nbc_iallgather_f #pragma weak nbc_iallgather = nbc_iallgather_f #pragma weak nbc_iallgather_ = nbc_iallgather_f #pragma weak nbc_iallgather__ = nbc_iallgather_f #pragma weak PNBC_IALLGATHER = nbc_iallgather_f #pragma weak pnbc_iallgather = nbc_iallgather_f #pragma weak pnbc_iallgather_ = nbc_iallgather_f #pragma weak pnbc_iallgather__ = nbc_iallgather_f void nbc_iallgather_f(void *sendbuf, int *sendcount, int *sendtype, void *recvbuf, int *recvcount, int *recvtype, int *fcomm, int *fhandle, int *ierr) { #else void NBC_F77_FUNC_(nbc_iallgather,NBC_IALLGATHER)(void *sendbuf, int *sendcount, int *sendtype, void *recvbuf, int *recvcount, int *recvtype, int *fcomm, int *fhandle, int *ierr); void NBC_F77_FUNC_(nbc_iallgather,NBC_IALLGATHER)(void *sendbuf, int *sendcount, int *sendtype, void *recvbuf, int *recvcount, int *recvtype, int *fcomm, int *fhandle, int *ierr) { #endif MPI_Datatype rtype, stype; MPI_Comm comm; NBC_Handle *handle; /* this is the only MPI-2 we need :-( */ rtype = MPI_Type_f2c(*recvtype); stype = MPI_Type_f2c(*sendtype); comm = MPI_Comm_f2c(*fcomm); /* create a new handle in handle table */ NBC_Create_fortran_handle(fhandle, &handle); /* call NBC function */ *ierr = NBC_Iallgather(sendbuf, *sendcount, stype, recvbuf, *recvcount, rtype, comm, handle); } #ifdef __cplusplus } #endif