1
1
Граф коммитов

5639 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
fca42347e3 ugni: use hash table to keep track of smsg frag completion
This commit was SVN r26153.
2012-03-15 20:13:32 +00:00
Nathan Hjelm
deddf0b33e ugni: fix frag leak in sendi
This commit was SVN r26152.
2012-03-15 20:13:20 +00:00
Nathan Hjelm
99f05d56e3 ugni: updated parameters and code cleanup
This commit was SVN r26151.
2012-03-15 20:13:11 +00:00
Nathan Hjelm
921176745d vader: remove lock based fifos
This commit was SVN r26150.
2012-03-15 20:12:59 +00:00
Nathan Hjelm
4e01440b05 vader: clean frag alloc/return
This commit was SVN r26149.
2012-03-15 20:12:46 +00:00
Matthias Jurenz
61d2818831 Changes to VT:
- general:
		- added missing entry in ChangeLog
	- vtunify[-mpi]:
		- fixed possibly uninitialized global token for the predefined Node and "All" process groups

This commit was SVN r26147.
2012-03-15 10:58:12 +00:00
Terry Dontje
e73df369e4 Update bfo pml with code from ob1 to support mprobe, improbe, mrecv, imrecv and cuda.
This commit was SVN r26145.
2012-03-15 10:20:46 +00:00
Jeff Squyres
1e92bc0fd1 Per request from Jeremiah Willcock, support the array-based MPI_TEST
and MPI_WAIT functions with a count of 0 (i.e., just return SUCCESS
and don't do anything).

This commit was SVN r26138.
2012-03-14 14:36:04 +00:00
Matthias Jurenz
03ea0245f0 Changes to OTF:
- general:
		- corrected OTF version number
	- otfprofile:
		- removed leading '=' from CSV lines to make it loadable into spreadsheets (e.g. Open Office)
		- fixed process naming in CSV output of collective operation statistics
Changes to VT:
	- configure:
		- added *_FOR_BUILD variables to CrayXE's default configure options; required for cross-building
	- VT libs:
		- fixed GPU communication, due to new process ID splitting
		- fixed parsing of PAPI native events in VT_METRICS; use strtok_r instead of strtok which is successively called inPAPI_event_name_to_code
		- added VT_METRICS_SEP to definition comments (-> Vampir's trace info)
	- Docu:
		- fixed link to TAU Reference Guide

This commit was SVN r26137.
2012-03-14 12:36:28 +00:00
Christopher Yeoh
524de80eaa Adds support for Cross Memory Attach in the sm btl.
This feature can be enabled at compile time with --with-cma passed
to configure.

At runtime it is also necessary to add "--mca btl btl_sm_use_cma 1"
to the mpirun command.

If both CMA and KNEM are compiled in and enabled at runtime then 
KNEM will take precedence and CMA will disable itself

This commit was SVN r26134.
2012-03-14 06:29:09 +00:00
Terry Dontje
a0e41ca685 Add support for building JAVA API on Solaris.
This commit was SVN r26130.
2012-03-13 09:34:02 +00:00
Mike Dubman
bd7abd72a9 in mca_mtl_mxm, don't allow negative tags for MPI_ANY_TAG
This commit was SVN r26128.
2012-03-09 22:11:14 +00:00
Rolf vandeVaart
41870ce6ee Mostly fix some of the verbose output. Also fix issue
where memory handle was blocking other registration.

This commit was SVN r26124.
2012-03-09 21:28:56 +00:00
Josh Hursey
b36b6639b2 forgot the Copyright update
This commit was SVN r26123.
2012-03-09 14:43:00 +00:00
Josh Hursey
ae9f424bd6 Per George's suggestion - reuse ompi_group_compare in the ompi_comm_compare operation to reuse the comparison code.
This commit was SVN r26122.
2012-03-09 14:39:09 +00:00
George Bosilca
de1078a71b Thanks to Alex Margolin for pointing out this relique.
This commit was SVN r26121.
2012-03-09 14:01:45 +00:00
Josh Hursey
4630c4060c Abstract MPI_Group_compare to an OMPI function for internal use (point the MPI interface to the internal function).
Fix a typo in group_init.c

This commit was SVN r26118.
2012-03-08 21:57:45 +00:00
Jeff Squyres
359c575345 Fix a few missed cases with MPROBE and friends.
This commit was SVN r26116.
2012-03-08 19:43:08 +00:00
Jeff Squyres
91b80630aa Update MPROBE, IMPROBE, MRECV, IMRECV with the behavior described in
MPI-3 ticket 328:
https://svn.mpi-forum.org/trac/mpi-forum-web/ticket/328.  Add
MPI_MESSAGE_NO_PROC constant.

This commit was SVN r26115.
2012-03-08 13:27:01 +00:00
Matthias Jurenz
164ee92f22 === VT upgrade to version 5.12.2 ===
Changes to OTF:
	- general:
		- updated copyright information (2011->2012)
	- otfmerge-mpi:
		- use the MPI-2 versions of MPI_Address and MPI_Type_struct
	- otfdump:
		- don't abort when reading events fails - the input tracefile might only have statistics

Changes to VT:
	- general:
		- updated version number to 5.12.2openmpi
		- updated copyright information (2011->2012)
	- configure:
		- added configure switches to enable/disable CUPTI and CUDA wrapping
		- fixed detection of C++ runtime libraries for Cray and PGI v11.x compilers
		- fixed detection of Cray compiler's OpenMP flag
		- fixed detection of MPI_IN_PLACE
		- disable support for RTLD_DEFAULT on CrayX? platforms; it's provided by dlfcn.h but not working
		- added '-force_flat_namespace' to linker flags of compiler wrappers on MacOS (causes that OpenMPI's libmpi_f77 calls the VT MPI wrapper functions - not the original ones)
		- default configure options on Cray platforms: use compiler option '--target=$XTPE_COMPILE_TARGET' only if the environment variable is set
	- VT libs:
		- added support for CUDA tracing via CUPTI callbacks and activities (runtime and driver API, kernels, memory copies, GPU idle time and GPU memory usage)
		- added support for cudaMemcpyDefault and synchronous peer-to-peer memory copies in CUDA library wrapper
		- fixed a bug in CUDA runtime wrapper initialization and thread creation
		- fixed a build bug occurred if CUDA and CUPTI found, but support for library tracing is disabled
		- use stack-allocated char-array when composing vtunify command; on some platforms system() results in exit code 127 when using a dynamically allocated char-array
		- fixed bug in async. counter plugin
		- fixed handling of empty MPI groups (MPI_GROUP_EMPTY)
		- fixed handling of MPI groups implicitly generated by MPI_Win_create
		- fixed conversion from MPI_Fint-arrays to MPI_Aint-arrays in Fortran MPI wrappers
		- fixed order of OpenMP threads based on its id (omp_get_thread_num)
		- fixed parsing of filter file to consider non-rank-specific filter rules appearing after a rank selection for disabling
		- fixed handling of 'errno' in LIBC[-I/O] wrappers for statically linked applications (set application's errno to the errno defined in the external LIBC which is used for calling the real functions)
		- suppress warnings about usage of deprecated MPI functions (OMPI_WANT_MPI_INTERFACE_WARNING=0)
	- vtunify[-mpi]:
		- fixed potential memory corruption during enqueuing recv. messages for p2p message matching
	- vtunify-mpi:
		- use the MPI-2 versions of MPI_Address and MPI_Type_struct
		- removed unused MPI wrappers
		- fixed assertion in p2p message matching which occurred when processing local traces with disabled ranks
	- vtdyn:
		- load user-specified shared libraries (-s SHLIB) into the mutatee before starting the instrumentation; adds support for instrumenting shared libraries which are loaded during runtime
	- compiler wrappers:
		- fixed detection of MPI library linked in the path form (e.g. libmpi.a instead of -lmpi)
		- fixed corrupt library order when using vtnvcc for linking MPI/CUDA mixed program
	- OPARI:
		- fixed Fortran parsing for detecting end of block DO loops

This commit was SVN r26114.
2012-03-08 13:01:30 +00:00
Pavel Shamis
102da281c4 OPENIB BTL - use orte_show_help instead of BTL_ERROR print in case ibv_reg_mr failed.
This commit was SVN r26111.
2012-03-08 09:04:03 +00:00
Mike Dubman
4e7e7d7c3f print error which is ignored on upper layer
This commit was SVN r26106.
2012-03-06 14:25:56 +00:00
George Bosilca
a78a7bd8e8 The tuned collectives can now deal with more than 2Gb of data.
This commit was SVN r26103.
2012-03-05 22:23:44 +00:00
George Bosilca
762b3e13a9 Use the correct name for the datatype destruction function.
This commit was SVN r26100.
2012-03-05 15:54:53 +00:00
George Bosilca
64a2979dc3 Always return something.
This commit was SVN r26099.
2012-03-05 15:54:15 +00:00
George Bosilca
7d523a8852 Avoid calling the bcast with counts larger than INT_MAX.
This commit was SVN r26098.
2012-03-05 14:30:30 +00:00
George Bosilca
e8c358c188 Allow Open MPI to deal with size_t internally.
This commit was SVN r26097.
2012-03-05 14:10:26 +00:00
George Bosilca
af9b6f6161 Minor beautification.
This commit was SVN r26095.
2012-03-05 13:23:54 +00:00
Abhishek Kulkarni
08ca0f80bc Fix a C/R bug where the restart hung due to
dangling fds in the openib btl.

This commit was SVN r26094.
2012-03-04 06:57:33 +00:00
George Bosilca
f83670211e Allow the user to define dynamic rules for messages larger than 2GB.
This commit was SVN r26084.
2012-03-02 21:16:23 +00:00
George Bosilca
8791ade293 Help he selection of the right algorithm for large data (> 2Gb). Thanks
to Fujitsu for the patch.

This commit was SVN r26080.
2012-03-02 19:12:22 +00:00
Terry Dontje
3e70cad203 Correct a few alignment problems to address the issue brought up in ticket #2964
This commit was SVN r26078.
2012-03-01 17:29:40 +00:00
Nathan Hjelm
f1525bdbff ob1: fix two fragment leaks
- MAJOR! get src descriptor leaks if mca_bml_base_send fails
 - minor. descriptor leaked in mca_pml_send_request_start_copy if the btl returns OMPI_ERR_RESOURCE_BUSY.

This commit was SVN r26077.
2012-03-01 15:53:39 +00:00
Matthias Jurenz
b4523496c8 Changes to VT: Fixed compiler warning about unused variable when compiling on MacOS
This commit was SVN r26076.
2012-03-01 12:17:27 +00:00
Mike Dubman
540b3c0c25 update mxm mtl to changes in mxm api
This commit was SVN r26073.
2012-02-29 22:02:34 +00:00
Jeff Squyres
97b3603036 A bunch of fixes and improvements to Open MPI's various command line tools.
* fixed some bugs where "unknown" tokens were allowed on the command
   line (which should really only be used for ortertun).
 * if an unknown token is encountered, print a short error to stderr
   and quit with a nonzero exit status
 * if we don't find the right number of parameters to an option, print
   a short error to stderr and quit with a nonzero exit status
 * when --help is given, print the help message to stdout (not stderr)
   and quit with a zero exit status
 * added --showme:help option to the wrapper compilers
 * updated docs in opal/util/cmd_line.h
 * other small/miscellaneous CLI parsing bugs in various tools

I won't bore you with what we did before.  :-)  Here's some examples
of what the new behavior looks like:

{{{
% ompi_info --bogus
ompi_info: Error: unknown option "--bogus"
Type 'ompi_info --help' for usage.
% ompi_info --param bogus
ompi_info: Error: option "--param" did not have enough parameters (2)
Type 'ompi_info --help' for usage.
%
}}}

This commit was SVN r26072.
2012-02-29 17:52:38 +00:00
Nathan Hjelm
a7209e309a ugni: opps, sendi was missing from Makefile.am
This commit was SVN r26067.
2012-02-28 16:10:35 +00:00
Shiqing Fan
fec1099509 fix two typecasts.
This commit was SVN r26066.
2012-02-28 15:28:57 +00:00
Edgar Gabriel
636cf786be local_heap_sort should really be a static function.
This commit was SVN r26065.
2012-02-28 14:42:56 +00:00
Matthias Jurenz
9c822b065f Even more changes belonging to r26051
This commit was SVN r26063.

The following SVN revision numbers were found above:
  r26051 --> open-mpi/ompi@f245ed965a
2012-02-27 15:53:14 +00:00
Edgar Gabriel
025c14a19a fix to the lustre configure logic.
This commit was SVN r26057.
2012-02-27 14:37:26 +00:00
Vishwanath Venkatesan
7c9c3ede61 Modified implementation for the static segmentation read algorithm with improved
performance and bug fixes.

This commit was SVN r26056.
2012-02-24 20:55:33 +00:00
Vishwanath Venkatesan
d5a9223a9a Removed a variable which was allocated but never used.
This commit was SVN r26055.
2012-02-24 20:48:52 +00:00
Vishwanath Venkatesan
326bc69df4 Modified implementation for static file write all algorithm which fixes all the previous
bugs and provides improved performance.

This commit was SVN r26054.
2012-02-24 20:47:09 +00:00
Jeff Squyres
027226ee19 ''Really'' fix Fortran attribute copy callbacks. Put the original
logic back (that was replaced by r25965 and r26000) and fix the one
place that missed OMPI_LOGICAL_2_INT.  This missing OMPI_LOGICAL_2_INT
was the real problem.

This commit was SVN r26053.

The following SVN revision numbers were found above:
  r25965 --> open-mpi/ompi@b10ebf4b2d
  r26000 --> open-mpi/ompi@90811cb50c
2012-02-24 16:42:30 +00:00
Matthias Jurenz
b785c9efe9 Missing change belonging to r26051
This commit was SVN r26052.

The following SVN revision numbers were found above:
  r26051 --> open-mpi/ompi@f245ed965a
2012-02-24 16:24:22 +00:00
Matthias Jurenz
f245ed965a Changes to OTF:
- otfmerge-mpi:
		- use the MPI-2 versions of MPI_Address and MPI_Type_struct

Changes to VT:
	- VT libs:
		- suppress warnings about usage of deprecated MPI functions (OMPI_WANT_MPI_INTERFACE_WARNING=0)
	- vtunify-mpi:
		- use the MPI-2 versions of MPI_Address and MPI_Type_struct
		- removed unused MPI wrappers

This commit was SVN r26051.
2012-02-24 15:48:51 +00:00
Jeff Squyres
11b50156c3 Remove extraneous spaces from the ugni help output.
This commit was SVN r26047.
2012-02-24 13:54:19 +00:00
Matthias Jurenz
99a3951c48 Changes to VT:
- fixed platform detection on BlueGene when configuring for the frontend

This commit was SVN r26042.
2012-02-24 10:10:50 +00:00
Rolf vandeVaart
b0a84b0a7d New btl that extends sm btl to support GPU transfers within a node.
Uses new CUDA IPC support.  Also, a few minor changes in PML to take
advantage of it.

This code has no effect unless user asks for it explicitly via 
configure arguments.  Otherwise, it is either #ifdef'ed out or
not compiled.

This commit was SVN r26039.
2012-02-24 02:13:33 +00:00