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Автор SHA1 Сообщение Дата
Brian Barrett
4f88f8954e * Fix missing / wrong constants in MPI C++ bindings. Thanks to Brian
Granger for bringing this to our attention.

  This needs to be modified slightly to go to the v1.0 branch.  Will
  submit patch via e-mail.

This commit was SVN r8872.
2006-02-01 16:01:32 +00:00
Brian Barrett
514e58c49a * pass an ompi_win_t, not an ompi_win_t*
This commit was SVN r8866.
2006-01-31 23:08:26 +00:00
Brian Barrett
44a516d966 * Clean up error checking in the MPI interface for MPI-2 onesided
* Implement fortran handle -> c handle tracking
* Remove some unneeded locking around free lists (the free list
  macros do their own locking)
* Try to be a bit more memory friendly with the w_mode setting /
  checking

This commit was SVN r8865.
2006-01-31 21:40:12 +00:00
Brian Barrett
0d507ad970 * Fix a bunch of checks for proper access / exposure epochs
* Add implementation of Post/Wait/Start/Complete synchronization

This commit was SVN r8848.
2006-01-31 02:44:08 +00:00
Brian Barrett
b1d2424013 Merge in present work on the MPI-2 onesided chapter. The current code is not
complete, but stable enough that it will have no impact on general development,
so into the trunk it goes.  Changes in this commit include:

 - Remove the --with option for disabling MPI-2 onesided support.  It
   complicated code, and has no real reason for existing
 - add a framework osc (OneSided Communication) for encapsulating
   all the MPI-2 onesided functionality
 - Modify the MPI interface functions for the MPI-2 onesided chapter
   to properly call the underlying framework and do the required
   error checking
 - Created an osc component pt2pt, which is layered over the BML/BTL
   for communication (although it also uses the PML for long message
   transfers).  Currently, all support functions, all communication
   functions (Put, Get, Accumulate), and the Fence synchronization
   function are implemented.  The PWSC active synchronization
   functions and Lock/Unlock passive synchronization functions are
   still not implemented

This commit was SVN r8836.
2006-01-28 15:38:37 +00:00
Jeff Squyres
dd142673f4 Add missing MPI::Request::Get_status methods.
This commit was SVN r8663.
2006-01-09 18:10:12 +00:00
Jeff Squyres
5f96a74e33 Make user-defined MPI::Op's be thread safe (the previous
implementation was not thread safe).  See lengthy comment in
ompi/mpi/cxx/intercepts.cc::ompi_mpi_cxx_op_intercept() for a full
explanation.

This commit was SVN r8606.
2005-12-23 16:49:09 +00:00
Jeff Squyres
4a061b7c78 Since all of the collectives (except scan and exscan) are defined on
both intercomm and intracomm, put them up in MPI::Comm rather than
duplicating them in MPI::Intercomm and MPI::Intracomm.

This commit was SVN r8583.
2005-12-21 21:12:52 +00:00
Jeff Squyres
ce6639d3ef Remove an extra -o $@ that doesn't seem to be necessary, and actually
confuses the Lahey compiler (because it doesn't want to name a module
mpi_kinds.ompi_module).  We shouldn't need this because we're already
touching a sentinel file (mpi_kinds.ompi_module) for make
dependencies; we don't need the compiler-generated module to be named
that. 

This commit was SVN r8571.
2005-12-20 21:43:04 +00:00
Jeff Squyres
ec08143923 Arrgh -- left a debugging printf in by accident.
This commit was SVN r8529.
2005-12-16 21:11:58 +00:00
Jeff Squyres
2bae18fd91 Fix MPI_IN_PLACE handling for Fortran collectives
This commit was SVN r8526.
2005-12-16 19:19:14 +00:00
Jeff Squyres
83d34c8435 - Remove some dead code
- Fix some typos from last commit
- Add collectives of intercommunicators
- Move the static current_op member from Intracomm to Comm
  --> this is still a remaining problem: the global variable
      current_op is not thread safe!

This commit was SVN r8520.
2005-12-15 22:07:34 +00:00
Jeff Squyres
8df345b66a Minor cleanups -- just keeping the real commit diffs meaningful.
This commit was SVN r8519.
2005-12-15 21:52:40 +00:00
Jeff Squyres
4379be6edc Fix some more const_cast issues. Thanks to Martin Audet for helping
with this.

This commit was SVN r8516.
2005-12-15 21:24:42 +00:00
Rainer Keller
9b2c23bead - Do additional checks in case of MPI_PARAM_CHECK for NULL pointers.
This commit was SVN r8487.
2005-12-13 08:13:13 +00:00
Craig E Rasmussen
d77f418fc9 Initial version.
This commit was SVN r8399.
2005-12-07 16:39:34 +00:00
Jeff Squyres
6149b5fec8 Change from old-C-style casting to get rid of const to proper
const_cast<>-style casting.  For the rationle behind this, see:

http://www.open-mpi.org/community/lists/users/2005/11/0391.php

This commit was SVN r8327.
2005-11-30 03:22:27 +00:00
Brian Barrett
a46d0d3801 Add support to Open MPI for MPI_Register_datarep, as ROMIO now has support for the
functionality.  This is a global registration, so all components have to be made
aware of the registration -- therefore, do things at the component level, not the
module level.

This commit was SVN r8314.
2005-11-29 18:25:35 +00:00
Rainer Keller
bf0892bb32 - Implement correct Fortran Logical-handling in f77/f90 interface in
case of:
    sizeof(MPI_Flogical) != sizeof (int)
  and
    Fortran value of .TRUE. != 1
  as is often the case.
- Check in configure the value of .TRUE., the C-type coresponding to
  logical and check, that fortran compiler does not do something strange
  with arrays of logicals
- Convert all occurrences of logicals in the fortran wrappers, only
  in case it is needed.
  *Please note* Implementation of MPI_Cart_sub needed special treatment.
- Output these value in ompi_info -a
- Clean up the prototypes_mpi.h to just have a single definition and
  thereby deleting the necessity for prototypes_pmpi.h

- configured, compiled and tested with F90-program, which uses
  MPI_Cart_create and MPI_Cart_get:
  linux ia32, gcc (no testing, as no f90)
  linux ia32, gcc --disable-mpi-f77 --disable-mpi-f90 (had a bug there)
  linux ia32, icc-8.1
  linux opteron, gcc-3.3.5, pgcc, pathccx/pathf90 (tested just
pgi-compiler)
  linux em64t, gcc, icc-8.1 (tested just icc)

This commit was SVN r8254.
2005-11-24 16:52:35 +00:00
Jeff Squyres
6b823e3663 Remove a little extra memory that is no longer needed
This commit was SVN r8246.
2005-11-23 11:16:59 +00:00
Edgar Gabriel
c96e4d43c7 fixes for other routines which take an MPI-2 byte displacement or an address as
an argument.

This commit was SVN r8244.
2005-11-23 03:52:19 +00:00
Edgar Gabriel
a1b00e0a49 fixing the fortran interface for MPI_Get_address. Since the address
argument is defined to be 

integer (KIND=MPI_ADDRESS_KIND)

we have to map that to an MPI_Aint in the f->c interface, else the
typecast back from the C to the Fortran interface will be wrong as well.
The same holds (at least) for all other new MPI-2 datatype functions
which take a byte-displacement or an address as an argument.

This commit was SVN r8243.
2005-11-23 03:22:50 +00:00
Edgar Gabriel
b6ddb73f38 fixing the condition under which the values of the c-functions are
passed back to the fortran routines. Should probably go to v1.0.1, but
is unfortunatly just half of the overall fix. 

This commit was SVN r8242.
2005-11-23 03:12:40 +00:00
Jeff Squyres
24b9de292c Fix for [righteous] compiler warnings from xlf90 compiler on OSX
10.3.  Specifically define what the parameter type is, and mark its
intent. 

This commit was SVN r8124.
2005-11-11 23:18:59 +00:00
Jeff Squyres
bacfb4fa2b Remove the generated F90 interfaces for all the "2 buffer" MPI API
functions (e.g., MPI_REDUCE).  We don't generate the back-end
subroutines for them (because it makes an expontential number of
subroutines, and compilers literally will segv), so we shouldn't
generate the f90 interfaces for them, either.  This allows user's MPI
F90 apps to automaitcally fall through to the F77 bindings for these
functions.

This commit was SVN r8094.
2005-11-10 16:04:39 +00:00
Jeff Squyres
6e08072113 Fix for the interface name for MPI_File_write_ordered_begin -- the
name was changed to shorten it too early (and then not restored), so
the "interface" name was not output correctly into
mpi-f90-interfaces.h.  Change to make it like the other long functions
-- temporarily change it to a shorter name while outputing the
subroutines, and then revert it when outputting the end interface.

This commit was SVN r8086.
2005-11-10 14:10:20 +00:00
George Bosilca
55051b81c4 Activate the protection against unavailable datatypes. They get a flag DT_FLAG_UNAVAILABLE. We check now this flag in all the send/recv operations via the macros on mpi/c/bindings.h.
This flag is inherited by all datatypes create with unavailable datatypes. Basically, we let the user create the wrong datatype but we dont let him using it for any pt2pt communications or any pack/unpack.

This commit was SVN r8069.
2005-11-09 23:43:41 +00:00
Jeff Squyres
6de5c208f2 Fix propblem with prototypes for wtick and wtime in prototypes_pmpi.h.
This commit was SVN r8043.
2005-11-08 19:45:51 +00:00
Jeff Squyres
a1ba3168d9 Remove extrameous comments
This commit was SVN r8017.
2005-11-07 22:44:26 +00:00
George Bosilca
9832d5d883 The OMPI_GENERATE_F77_BINDINGS work only for the most common F77 bindings, the
one that does not return any value. There are 2 exceptions MPI_Wtick and MPI_Wtime.
For these 2 we can insert the bindings manually.

This commit was SVN r8016.
2005-11-07 19:37:32 +00:00
Brian Barrett
28891d6de3 * Move MPI_Wtime and MPI_Wtick back out of mpi.h and into the C bindings library,
restoring the PMPI version.  A variety of reasons for this:

  - mpi.h was blinding using inline in a C header without the configrue mojo
    properly set it, as mpi.h doesn't include ompi_config.h.  This eventually
    would have caused a borked build.
  - mpi.h and mpif.h were never updated to not include PMPI_W{tick,time} as
    a proper prototype
  - The C++ and F90 bindings didn't do the right things when there was no
    PMPI version of the C call, but profiling was enabled
  - Since we only use gettimeofday, the function call overhead really doesn't
    matter

This should probably go to the 1.0 branch

This commit was SVN r8014.
2005-11-07 17:22:48 +00:00
Jeff Squyres
42ec26e640 Update the copyright notices for IU and UTK.
This commit was SVN r7999.
2005-11-05 19:57:48 +00:00
Jeff Squyres
7bdfe6557b - Update the checks in REDUCE, ALLREDUCE, SCAN, EXSCAN, and
REDUCE_SCATTER to more thoroughly check the datatype/op combination
  to see if it's valid or not.  If it's not, print a meaningful error
  message rather than "Invalid MPI_Op" indicating what specifically
  was wrong (therefore hopefully helping users track down where in the
  code the problem is, and/or telling us that there's a reduction
  operation combo that we don't support that we should)
- The check for whether a datatype is intrinsic needed to be updated
  -- it's not sufficient to check that dtype->id < DT_MAX_PREDEFINED;
  you really need to check the PREDEFINED flag on the datatype.
  Thanks to George for this fix (only intrinsics have a meaningful
  value in dtype->id).

This commit was SVN r7923.
2005-10-28 16:47:32 +00:00
Jeff Squyres
23ab9e0277 A better solution to the previous commit -- RETAIN/RELEASE the MPI_Op
at the top-level MPI API function.  This allows two kinds of
scenarios:

1. MPI_Ireduce(..., op, ...);
   MPI_Op_free(op);
   MPI_Wait(...);

For the non-blocking collectives that we're someday planning -- to
make them analogous to non-blocking point-to-point stuff.

2. Thread 1:
   MPI_Reduce(..., op, ...);
   Thread 2:
   MPI_Op_free(op);

Granted, for #2 to occur would tread a fine line between a correct and
erroneous MPI program, but it is possible (as long as the Op_free was
*after* MPI_reduce() had started to execute).  It's more realistic
with case #1, where the Op_free() could be executed in the same thread
or a different thread.

This commit was SVN r7870.
2005-10-25 19:20:42 +00:00
Jeff Squyres
e097ee635a Silence compiler warnings.
This commit was SVN r7768.
2005-10-14 22:06:25 +00:00
Jeff Squyres
f47c272986 Fix for the max-31-F90-symbol-limit problem: keep the interface names
the same (since those are both mandated by MPI and <31 characters),
but change some of the back-end subroutine names so that they are <31
characters and therefore obey the F90 standard.  Remove an outdated /
useless (and confusing) script.

This commit was SVN r7764.
2005-10-14 19:50:30 +00:00
Edgar Gabriel
2c909383bb abstracting the group_free operation into an internal routine (required
by some other components on ompi).

This commit was SVN r7763.
2005-10-14 18:51:20 +00:00
Josh Hursey
ef51608a81 fix compiler warning
This commit was SVN r7706.
2005-10-11 22:03:21 +00:00
Jeff Squyres
94bab558dd Put in a check to ensure the root is valid (all other rooted
operations have this; we somehow missed this for intracomms on reduce,
and it bit me this morning ;-) )

This commit was SVN r7612.
2005-10-04 14:38:17 +00:00
Tim Woodall
aceab46c5f use MPI_Alloc_mem/MPI_Free_mem for internally allocated buffers
This commit was SVN r7487.
2005-09-22 16:43:17 +00:00
Brian Barrett
c87babb565 * if start_rank == end_rank, there doesn't seem to be a requirement that
stride == 1, and the Intel tests explicitly test the case with
  strides != 1, expecting them to work

This commit was SVN r7411.
2005-09-16 18:44:21 +00:00
George Bosilca
789d49d613 Activate thread support ... at least at the MPI level.
This commit was SVN r7386.
2005-09-15 15:44:12 +00:00
Jeff Squyres
b8f4f88ccc Ignore sendtype/sendcount if MPI_IN_PLACE
This commit was SVN r7361.
2005-09-14 01:44:55 +00:00
Jeff Squyres
15f5294da4 Ignore another param in the IN_PLACE case
This commit was SVN r7348.
2005-09-13 19:15:01 +00:00
Jeff Squyres
c89e8c3712 Fixes for error checking -- properly ignore arguments as they should
be

This commit was SVN r7347.
2005-09-13 19:07:13 +00:00
Jeff Squyres
ad647b105d Error checking for MPI_IN_PLACE
This commit was SVN r7343.
2005-09-13 17:07:03 +00:00
George Bosilca
71b1cdb5f5 Cleanup the dependencies between the MPI layer and the rest of the ompi files.
Modify the includes to start with the root directory (i.e orte/datatype/datatype.h).

This commit was SVN r7306.
2005-09-12 09:17:44 +00:00
George Bosilca
43e37060a8 Correct a unfortunate typo in the fortran constants ... We still have untested code inside :)
Add a macro to convert from Fortran to C MPI_IN_PLACE.

This commit was SVN r7276.
2005-09-09 20:46:47 +00:00
George Bosilca
56f8607439 Adding MPI_IN_PLACE for both languages C and Fortran. Still working on the C++ and maybe F90 stuff. It's easilly
getting ugly ...

This commit was SVN r7275.
2005-09-09 20:44:04 +00:00
Brian Barrett
ed56e743b7 * update configure.ac to use the modern version of AC_INIT and
AM_INIT_AUTOMAKE, instead of the deprecated version.
* Work around dumbness in modern AC_INIT that requires the version
  number to be set at autoconf time (instead of at configure time, as
  it was before).  Set the version number, minus the subversion r number,
  at autoconf time.  Override the internal variables to include the r
  number (if needed) at configure time.  Basically, the right thing
  should always happen.  The only place it might not is the version
  reported as part of configure --help will not have an r number.
* Since AM_INIT_AUTOMAKE taks a list of options, no need to specify
  them in all the Makefile.am files.
* Addes support for subdir-objects, meaning that object files are put
  in the directory containing source files, even if the Makefile.am is
  in another directory.  This should start making it feasible to
  reduce the number of Makefile.am files we have in the tree, which
  will greatly reduce the time to run autogen and configure.

This commit was SVN r7211.
2005-09-07 05:54:53 +00:00