put the name of the file that set them if they were set by file. This is of great assistance to support personnel trying to understand why a user is having pro
blems.
Coordinated with Jeff.
This commit was SVN r19111.
environment, file, or API override).
Refs trac:1397
This commit was SVN r18943.
The following Trac tickets were found above:
Ticket 1397 --> https://svn.open-mpi.org/trac/ompi/ticket/1397
Lenny and I went back and forth on whether we should simply register
another "mpi_paffinity_alone" MCA param and then try to figure out
which one was set in ompi_mpi_init, but there was difficulty in
figuring out what to do. So it seemed like the Right Thing to do was
to implement what was committed in r18770; then we could tell where
MCA parameters were set from and you could do Better Things (this is
also useful in the openib BTL, where parameters can be set either via
MCA parameter or via an INI file).
But after that was done, it seemed only a few steps further to
actually implement two new features in the MCA params area:
* Synonyms (where one MCA param name is a synonym for another)
* Allow MCA params and/or their synonyms to be marked as "deprecated"
(printing out warnings if they are used)
These features have actually long been discussed/desired, and I had
some time in airports and airplanes recently where I could work in
this stuff on a standalone laptop. So I did it. :-)
This commit introduces these two new features, and then uses them to
register mpi_paffinity_alone as a non-deprecated synonym for
opal_paffinity_alone. A few other random points in this commit:
* Add a few error checks for conditions that were not checked before
* Correct some comments in mca_base_params.h
* Add a few comments in strategic places
* ompi_info now prints additional information:
* for any MCA parameter that has synonyms, it lists all the
synonyms
* synonyms are also output as 1st-class MCA params, but with an
additional attribute indicating that they have a "parent"
* all MCA param name (both "real" or "synonym") will output an
attribute indicating whether it is deprecated or not. A synonym
is deprecated if it iself is marked as deprecated (via the
mca_base_param_regist_syn() or mca_base_param_register_syn_name()
functions) or if its "parent" MCA parameter is deprecated
This commit was SVN r18859.
The following SVN revision numbers were found above:
r18770 --> open-mpi/ompi@8efe67e08c
The following Trac tickets were found above:
Ticket 1383 --> https://svn.open-mpi.org/trac/ompi/ticket/1383
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.
I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.
This commit was SVN r18619.
such, the commit message back to the master SVN repository is fairly
long.
= ORTE Job-Level Output Messages =
Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):
* orte_output(): (and corresponding friends ORTE_OUTPUT,
orte_output_verbose, etc.) This function sends the output directly
to the HNP for processing as part of a job-specific output
channel. It supports all the same outputs as opal_output()
(syslog, file, stdout, stderr), but for stdout/stderr, the output
is sent to the HNP for processing and output. More on this below.
* orte_show_help(): This function is a drop-in-replacement for
opal_show_help(), with two differences in functionality:
1. the rendered text help message output is sent to the HNP for
display (rather than outputting directly into the process' stderr
stream)
1. the HNP detects duplicate help messages and does not display them
(so that you don't see the same error message N times, once from
each of your N MPI processes); instead, it counts "new" instances
of the help message and displays a message every ~5 seconds when
there are new ones ("I got X new copies of the help message...")
opal_show_help and opal_output still exist, but they only output in
the current process. The intent for the new orte_* functions is that
they can apply job-level intelligence to the output. As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.
=== New code ===
For ORTE and OMPI programmers, here's what you need to do differently
in new code:
* Do not include opal/util/show_help.h or opal/util/output.h.
Instead, include orte/util/output.h (this one header file has
declarations for both the orte_output() series of functions and
orte_show_help()).
* Effectively s/opal_output/orte_output/gi throughout your code.
Note that orte_output_open() takes a slightly different argument
list (as a way to pass data to the filtering stream -- see below),
so you if explicitly call opal_output_open(), you'll need to
slightly adapt to the new signature of orte_output_open().
* Literally s/opal_show_help/orte_show_help/. The function signature
is identical.
=== Notes ===
* orte_output'ing to stream 0 will do similar to what
opal_output'ing did, so leaving a hard-coded "0" as the first
argument is safe.
* For systems that do not use ORTE's RML or the HNP, the effect of
orte_output_* and orte_show_help will be identical to their opal
counterparts (the additional information passed to
orte_output_open() will be lost!). Indeed, the orte_* functions
simply become trivial wrappers to their opal_* counterparts. Note
that we have not tested this; the code is simple but it is quite
possible that we mucked something up.
= Filter Framework =
Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr. The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations. The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc. This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).
Filtering is not active by default. Filter components must be
specifically requested, such as:
{{{
$ mpirun --mca filter xml ...
}}}
There can only be one filter component active.
= New MCA Parameters =
The new functionality described above introduces two new MCA
parameters:
* '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
help messages will be aggregated, as described above. If set to 0,
all help messages will be displayed, even if they are duplicates
(i.e., the original behavior).
* '''orte_base_show_output_recursions''': An MCA parameter to help
debug one of the known issues, described below. It is likely that
this MCA parameter will disappear before v1.3 final.
= Known Issues =
* The XML filter component is not complete. The current output from
this component is preliminary and not real XML. A bit more work
needs to be done to configure.m4 search for an appropriate XML
library/link it in/use it at run time.
* There are possible recursion loops in the orte_output() and
orte_show_help() functions -- e.g., if RML send calls orte_output()
or orte_show_help(). We have some ideas how to fix these, but
figured that it was ok to commit before feature freeze with known
issues. The code currently contains sub-optimal workarounds so
that this will not be a problem, but it would be good to actually
solve the problem rather than have hackish workarounds before v1.3 final.
This commit was SVN r18434.
Some MPI C interface files saw some spacing changes to conform to the coding standards of Open MPI.
Changed MPI C interface files to use {{{OPAL_CR_ENTER_LIBRARY()}}} and {{{OPAL_CR_EXIT_LIBRARY()}}} instead of just {{{OPAL_CR_TEST_CHECKPOINT_READY()}}}. This will allow the checkpoint/restart system more flexibility in how it is to behave.
Fixed the configure check for {{{--enable-ft-thread}}} so it has a know dependance on {{{--enable-mpi-thread}}} (and/or {{{--enable-progress-thread}}}).
Added a line for Checkpoint/Restart support to {{{ompi_info}}}.
Added some options to choose at runtime whether or not to use the checkpoint polling thread. By default, if the user asked for it to be compiled in, then it is used. But some users will want the ability to toggle its use at runtime.
There are still some places for improvement, but the feature works correctly. As always with Checkpoint/Restart, it is compiled out unless explicitly asked for at configure time. Further, if it was configured in, then it is not used unless explicitly asked for by the user at runtime.
This commit was SVN r17516.
* Update MPI_WTICK / MPI_WTIME man pages:
* Fix C++ declarations
* Note that we may use better than gettimeofday() on some platforms
* Add "MPI_WTIME support" ("options:mpi-wtime") flag in ompi_info
output indicating whether we use "native" or "gettimeofday" for
MPI_WTIME
This commit was SVN r16774.
Eddelbuettel, one of the Debian/GNU Linux maintainers of the Open MPI
package.
* Updated the contributed man page with some examples and
updated option descriptions, and other small things.
* Made the --hostname option work again.
* Made the --version option work like it's supposed to.
* Updated help strings that are displayed via --help to be a bit more
descriptive in the parameters that various options accept.
This commit was SVN r15260.
compiler suite. The rule is that ompi_info.h is supposed to be the
''first'' file included so that it can affect system header files if
necessary (and it is sometimes necessary, such as with the PGI
compiler suite).
If this breaks VC on Windows, we'll have to find another fix. More on
the mailing list...
This commit was SVN r14453.
The following SVN revision numbers were found above:
r14435 --> open-mpi/ompi@a20b43ace9
finally brings in functionality that is already on the 1.2 branch, and
was developed and tested in the v1.2ofed branch (and other places).
Short version of new features:
* Support for ibv_fork_init()
* Automatically fill in the openib BTL bandwidth value by
querying the HCA port
* Installdirs functionality
* Fixes to always use -I in the Fortran wrapper compilers (#924)
* Gleb's mpool updates
* Remove some kruft in btl/openib/configure.m4, therefore
fixing the harmless warnings noted in #665
* Bunches of updates to the Linux RPM spec file
I.e., effectively the same thing that r14411 brought to the v1.2
branch.
Also effectively brought in r14432 and r14433 (some fixes on top of
the original r14411 commit to v1.2). Still need to bring in the moral
equivalent of r14445 after this commit (fixes to installdirs).
This commit was SVN r14449.
The following SVN revision numbers were found above:
r14411 --> open-mpi/ompi@83b31314ae
r14432 --> open-mpi/ompi@a48f160595
r14433 --> open-mpi/ompi@68f346d2bc
r14445 --> open-mpi/ompi@13d366b827
* Add line about heterogeneous support to ompi_info output
* Print warning and abort if heterogeneous detected and
no heterogeneous support available.
Refs trac:587
This commit was SVN r12943.
The following Trac tickets were found above:
Ticket 587 --> https://svn.open-mpi.org/trac/ompi/ticket/587
all platforms. The only exceptions (and I will not deal with them
anytime soon) are on Windows:
- the write functions which require the length to be an int when it's
a size_t on all UNIX variants.
- all iovec manipulation functions where the iov_len is again an int
when it's a size_t on most of the UNIXes.
As these only happens on Windows, so I think we're set for now :)
This commit was SVN r12215.
Add --enable-orterun-prefix-by-default (and a synonym:
--enable-mpirun-prefix-by-default) to make orterun always behave as if
"--prefix $prefix" was given on the command line (where $prefix is the
value given to the --prefix option to configure). This prevents many
rsh/ssh users from needing to modify their shell startup files to set
the LD_LIBRARY_PATH for Open MPI (they will still need to set PATH or
otherwise find the OMPI executables to mpicc/mpirun/etc. their MPI
applications).
Also added --noprefix option to orterun to disable this behavior.
Finally, note that even if --enable-orterun-prefix-by-default is
specified, if the user specifies --prefix or /path/to/mpirun, these
options will override the default value of the prefix ($prefix).
This commit was SVN r11669.
The following Trac tickets were found above:
Ticket 377 --> https://svn.open-mpi.org/trac/ompi/ticket/377
- Real fix for pgi compilers and missing asprintf declaration.
The problem was that C++ headers has been included before "ompi_config.h".
This lead to the problem that "stdio.h" has been source without _GNU_SOURCE.
This commit was SVN r11649.
- Make the F90 bindings compile and link properly with gfortran 4.0,
4.1, Intel 9.0, PGI 6.1, Sun (don't know version offhand -- the most
current as of this writing, I think), and NAG 5.2, although some
have limitations (e.g., NAG can't seem to handle the medium and
large sizes)
- Building the F90 "small" module size is now the default, even for
developers
- Split up mpif.h into multiple files because parts of it were toxic
to the F90 bindings
- Properly specify unsized/unshaped arrays to make the bindings work
on all known compilers
- Make ompi_info show Fortran 90 bindings size
- XML somewhat lags the generated scripts as of this commit, but
functionality was my main goal -- the XML can be updated later (if
at all).
This commit was SVN r10118.
installation directories) in configure, the files that depend on this
information are not properly rebuilt. If you need this information,
don't setup a -D in the Makefile.am - instead, include
opal/install_dirs.h.
* Use the : option in AC_CONFIG_FILES to avoid needing to expose that
we are playing around with temporary files with our headers to avoid
rebuilding
* Clean up the version file information a bit, and like the install
directory stuff, make sure that there is a dependency so that
ompi_info gets rebuilt properly when a version number changes.
This commit was SVN r9256.
- move files out of toplevel include/ and etc/, moving it into the
sub-projects
- rather than including config headers with <project>/include,
have them as <project>
- require all headers to be included with a project prefix, with
the exception of the config headers ({opal,orte,ompi}_config.h
mpi.h, and mpif.h)
This commit was SVN r8985.
case of:
sizeof(MPI_Flogical) != sizeof (int)
and
Fortran value of .TRUE. != 1
as is often the case.
- Check in configure the value of .TRUE., the C-type coresponding to
logical and check, that fortran compiler does not do something strange
with arrays of logicals
- Convert all occurrences of logicals in the fortran wrappers, only
in case it is needed.
*Please note* Implementation of MPI_Cart_sub needed special treatment.
- Output these value in ompi_info -a
- Clean up the prototypes_mpi.h to just have a single definition and
thereby deleting the necessity for prototypes_pmpi.h
- configured, compiled and tested with F90-program, which uses
MPI_Cart_create and MPI_Cart_get:
linux ia32, gcc (no testing, as no f90)
linux ia32, gcc --disable-mpi-f77 --disable-mpi-f90 (had a bug there)
linux ia32, icc-8.1
linux opteron, gcc-3.3.5, pgcc, pathccx/pathf90 (tested just
pgi-compiler)
linux em64t, gcc, icc-8.1 (tested just icc)
This commit was SVN r8254.
When compiling C++ code that includes something that looks for the C++
header file "memory" (stupid C++ headers not having .h extensions), it
goes through the header file search path, which includes $(topsrcdir)/opal,
so it finds the directory $(topsrcdir)/opal/memory/ and tries to load
that as the memory header file and all goes downhill.
This commit was SVN r8111.
* Make ompi_info list timer components
* Remove flag to display whether we have memory intercepts (components are
already listed), until we can figure out how to do it *after* the
components are opened.
This commit was SVN r6950.
* Add base to memory framework so that we can do something sane with
ompi_info
* Updated ompi_info to print components for memory framework and
show whether we have memory hooks active or not.
This commit was SVN r6861.
- new preferred API calls for registering MCA parameters are
mca_base_param_reg_{int|string} and
mca_base_param_reg_{int|string}_name.
- See opal/mca/base/mca_base_param.h for docs on new calls.
- Can now register and lookup a value at the same time.
- Can now mark a parameter "read only" at registration time
- Can now mark a parameter "internal" at registration time
- Can now associate a help message with the parameter at registration
time; displayed in the ompi_info output.
The old API calls are still available for backwards compatibility
(mca_base_param_register_{int|string}. They will eventually be
removed -- all developers are encouraged to use the new APIs from here
on out and replace any old calls with the new API.
Some params were also renamed -- the previous convention of using
"base_" as a prefix for any param that was not associated with a
component is henceforth deprecated. Instead, use one of the following
prefixes:
mca: for anything in the MCA base itself
opal: for anything in OPAL
orte: for anything in ORTE
mpi: for anything in OMPI
This commit was SVN r6698.
* Add ability to completely disable libltdl (the dlopen code to load
dynamic shared objects) to configure: --disable-dlopen
* Added MCA param (component_disable_dlopen) to disable DSO loading
at runtime
* Made the event library behave in some not-completely-erroneous way
on platforms where it has absolutely no eventops support (ie, no
select, poll, or epoll)
* Disabled orte_wait, opal_few, and opal_daemon_init code on
platforms without fork, waitpid support. All non-init functions
will return OPMI_ERR_NOT_SUPPORTED
* Disable orteprobe tool when fork or pipe aren't supported
This commit was SVN r6490.
* rename ompi_basename to opal_basename
* rename ompi bitop functions to opal
* rename ompi_cmd_line to opal_cmd_line
* rename ompi_sizet2int to opal_sizet2int
* rename orte_daemon_init to opal_daemon_init
* rename ompi_few to opal_few
This commit was SVN r6330.
