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Граф коммитов

250 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
75e99e6118 Do a better job of selecting cm ess component, handle tool and daemon issues
This commit was SVN r22942.
2010-04-07 18:59:21 +00:00
Ralph Castain
1caba7af2f Fix a bunch of compiler warnings reported by Jeff
This commit was SVN r22930.
2010-04-03 00:20:19 +00:00
Ralph Castain
de6679dbd3 Truly respect the -quiet option. Make it an mca param so someone doesn't have to put it solely on the cmd line. Tell show_help to shaddup as well.
This commit was SVN r22926.
2010-04-02 14:19:38 +00:00
Ralph Castain
1bf9684ebb Don't include jobs in the nidmap if they aren't mapped jobs
This commit was SVN r22886.
2010-03-25 22:54:57 +00:00
Ralph Castain
0b9552cd4e Expand the ESS framework's API to include a new function "query_sys_info" that allows the caller to retrieve key-value pairs of info on the local system capabilities (e.g., cpu type/model). Have each daemon and the HNP "sense" that information and provide it to their local procs to avoid having every proc querying the system directly.
This commit was SVN r22870.
2010-03-23 20:47:41 +00:00
Ralph Castain
c16cd10bb2 Save the username, if specified, for each node
This commit was SVN r22817.
2010-03-11 15:24:18 +00:00
Shiqing Fan
49502af2ba fix the type cast.
This commit was SVN r22800.
2010-03-09 10:02:50 +00:00
Ralph Castain
bfa39d7f7e Update the seq mapper to support lists from -host. Reorg the dash_host code to provide an ordered list as required by the seq mapper
This commit was SVN r22795.
2010-03-08 09:54:49 +00:00
Ralph Castain
cdae19cf7b Add a convenience macro to make a job family
This commit was SVN r22784.
2010-03-05 13:35:09 +00:00
Ralph Castain
c88fe1ea54 Create a new mca parameter to control creation of session directories. Defaults to true so that the current behavior of always creating them is preserved. If set to false (0), then don't create session directories. Helps in those environments where session directories are a problem.
Tell the sm btl that it cannot run if no session directories were created.

This commit was SVN r22756.
2010-03-02 15:18:33 +00:00
Ralph Castain
2541aa98ab Change the app_idx type to uint32_t to support users who use large numbers of app_contexts. Set it up as a new typedef so we can change it later without as much effort.
This commit was SVN r22727.
2010-02-27 17:37:34 +00:00
Ralph Castain
9f3ccebeaa We need to barrier for orte apps when the job is initially started, but we must not do the barrier when a proc is restarted as the other procs in the job won't know to participate.
This commit was SVN r22388.
2010-01-10 02:21:30 +00:00
Ralph Castain
3a72ee9dca Fix a bug reported by Rainer whereby we could free and reuse an address if the user specified the tmp dir base. After discussing with Josh, we also removed the code that had us retry creation of the session dir (using default values) if the user-specified value didn't work for some reason. Adhering to OMPI standard practices, we abort if the user-specified value doesn't work.
This commit was SVN r22255.
2009-12-03 01:57:35 +00:00
Ralph Castain
9a6d5697a8 Protect against NULL input - I'm -sure- no one will do it, but...well, actually, they did. :-/
This commit was SVN r22232.
2009-11-25 15:13:21 +00:00
Ralph Castain
c1206139dd Ensure the thread-safe data buffers are initialized prior to use
This commit was SVN r22231.
2009-11-25 15:12:45 +00:00
Ralph Castain
3921069230 Ensure we completely cleanout the old nidmap info
This commit was SVN r22222.
2009-11-19 19:42:15 +00:00
Ralph Castain
51f64aaf96 Add a new ras module to support bootstrap operations. Additional functionality may eventually be required in the component, but for now all it does is provide a mechanism for ensuring that other allocations don't confuse the system.
Only active if specifically directed to use it

This commit was SVN r22040.
2009-09-30 23:30:24 +00:00
Ralph Castain
105ef7eeaf Turn off a debug by properly setting the verbosity value
This commit was SVN r22033.
2009-09-30 06:47:48 +00:00
Ralph Castain
cb7f608006 Remove debug output
This commit was SVN r21957.
2009-09-09 17:46:28 +00:00
Ralph Castain
8ae4b55d16 Enable a new command line option to --report-events that instructs mpirun to RML-report specific events during job life to the requestor.
This commit was SVN r21954.
2009-09-09 05:28:45 +00:00
Ralph Castain
0421a49844 Update the xml support to allow -xml-file foo whereby we redirect all xml formatted output (and ONLY xml formatted output) to a specified file
This commit was SVN r21930.
2009-09-02 18:03:10 +00:00
Ralph Castain
509cc0553c When directly launched by an RM, flag that a process is operating without daemons - i.e., standalone. Provide an error string for the new socket_not_available error. Use errmgr.abort to exit when we cannot get a socket, and ensure that the slurmd module returns the proper exit status for slurm 2.0
This commit was SVN r21868.
2009-08-22 02:58:20 +00:00
Ralph Castain
35f8b68de6 Note to self: save all changes before committing
This commit was SVN r21863.
2009-08-21 12:54:29 +00:00
Ralph Castain
535408d6c2 Answer a Jeff-ism and check malloc for NULL return - for all xml formatting errors, revert to at least showing the non-xml formatted message
This commit was SVN r21862.
2009-08-21 12:41:54 +00:00
Ralph Castain
2e0bd04755 Ensure that show_help messages are properly xml formatted
This commit was SVN r21858.
2009-08-20 19:23:26 +00:00
Rainer Keller
8e1b23779f - Replace combinations of
#if defined (c_plusplus)
          defined (__cplusplus)
   followed by
      extern "C" {
   and the closing counterpart by BEGIN_C_DECLS and END_C_DECLS.

   Notable exceptions are:
    - opal/include/opal_config_bottom.h:
      This is our generated code, that itself defines BEGIN_C_DECL and
      END_C_DECL
    - ompi/mpi/cxx/mpicxx.h:
      Here we do not include opal_config_bottom.h:                                 
    - Belongs to external code:                                                    
      opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.c        
      opal/mca/backtrace/darwin/MoreBacktrace/MoreDebugging/MoreBacktrace.h        
    - opal/include/opal/prefetch.h:
      Has C++ specific macros that are protected:                                  

    - Had #if ... } #endif  _and_ END_C_DECLS (aka end up with 2x
      END_C_DECLS)
      ompi/mca/btl/openib/btl_openib.h
    - opal/event/event.h has #ifdef __cplusplus as BEGIN_C_DECLS...
    - opal/win32/ompi_process.h: had extern "C"\n {...
      opal/win32/ompi_process.h: dito
    - ompi/mca/btl/pcie/btl_pcie_lex.l: needed to add *_C_DECLS
      ompi/mpi/f90/test/align_c.c: dito
    - ompi/debuggers/msgq_interface.h: used #ifdef __cplusplus
    - ompi/mpi/f90/xml/common-C.xsl: Amend

   Tested on linux using --with-openib and --with-mx

   The following do not contain either opal_config.h, orte_config.h or
   ompi_config.h
   (but possibly other header files, that include one of the above):
      ompi/mca/bml/r2/bml_r2_ft.h
      ompi/mca/btl/gm/btl_gm_endpoint.h
      ompi/mca/btl/gm/btl_gm_proc.h
      ompi/mca/btl/mx/btl_mx_endpoint.h
      ompi/mca/btl/ofud/btl_ofud_endpoint.h
      ompi/mca/btl/ofud/btl_ofud_frag.h
      ompi/mca/btl/ofud/btl_ofud_proc.h
      ompi/mca/btl/openib/btl_openib_mca.h
      ompi/mca/btl/portals/btl_portals_endpoint.h
      ompi/mca/btl/portals/btl_portals_frag.h
      ompi/mca/btl/sctp/btl_sctp_endpoint.h
      ompi/mca/btl/sctp/btl_sctp_proc.h
      ompi/mca/btl/tcp/btl_tcp_endpoint.h
      ompi/mca/btl/tcp/btl_tcp_ft.h
      ompi/mca/btl/tcp/btl_tcp_proc.h
      ompi/mca/btl/template/btl_template_endpoint.h
      ompi/mca/btl/template/btl_template_proc.h
      ompi/mca/btl/udapl/btl_udapl_eager_rdma.h
      ompi/mca/btl/udapl/btl_udapl_endpoint.h
      ompi/mca/btl/udapl/btl_udapl_mca.h
      ompi/mca/btl/udapl/btl_udapl_proc.h
      ompi/mca/mtl/mx/mtl_mx_endpoint.h
      ompi/mca/mtl/mx/mtl_mx.h
      ompi/mca/mtl/psm/mtl_psm_endpoint.h
      ompi/mca/mtl/psm/mtl_psm.h
      ompi/mca/pml/cm/pml_cm_component.h
      ompi/mca/pml/csum/pml_csum_comm.h
      ompi/mca/pml/dr/pml_dr_comm.h
      ompi/mca/pml/dr/pml_dr_component.h
      ompi/mca/pml/dr/pml_dr_endpoint.h
      ompi/mca/pml/dr/pml_dr_recvfrag.h
      ompi/mca/pml/example/pml_example.h
      ompi/mca/pml/ob1/pml_ob1_comm.h
      ompi/mca/pml/ob1/pml_ob1_component.h
      ompi/mca/pml/ob1/pml_ob1_endpoint.h
      ompi/mca/pml/ob1/pml_ob1_rdmafrag.h
      ompi/mca/pml/ob1/pml_ob1_recvfrag.h
      ompi/mca/pml/v/pml_v_output.h
      opal/include/opal/prefetch.h
      opal/mca/timer/aix/timer_aix.h
      opal/util/qsort.h
      test/support/components.h

This commit was SVN r21855.

The following SVN revision numbers were found above:
  r2 --> open-mpi/ompi@58fdc18855
2009-08-20 11:42:18 +00:00
Ralph Castain
0005e6e834 Correct a couple of bugs in the rank_file mapper that were incorrectly assigning vpids.
Add a capability to parse the rankfile to extract node information in place of requiring both hostfile and rankfile for non-RM managed environments. The rankfile is -only- parsed for this IF the hostfile and -host options are not given. Otherwise, those are used to establish allocation info as we did before this commit.

This commit was SVN r21815.
2009-08-13 16:08:43 +00:00
Ralph Castain
1dc12046f1 Modify the OMPI paffinity and mapping system to support socket-level mapping and binding. Mostly refactors existing code, with modifications to the odls_default module to support the new capabilities.
Adds several new mpirun options:

* -bysocket - assign ranks on a node by socket. Effectively load balances the procs assigned to a node across the available sockets. Note that ranks can still be bound to a specific core within the socket, or to the entire socket - the mapping is independent of the binding.

* -bind-to-socket - bind each rank to all the cores on the socket to which they are assigned.

* -bind-to-core - currently the default behavior (maintained from prior default)

* -npersocket N - launch N procs for every socket on a node. Note that this implies we know how many sockets are on a node. Mpirun will determine its local values. These can be overridden by provided values, either via MCA param or in a hostfile

Similar features/options are provided at the board level for multi-board nodes.

Documentation to follow...

This commit was SVN r21791.
2009-08-11 02:51:27 +00:00
George Bosilca
ed93b967f7 Remove some warnings about uninitialized values.
This commit was SVN r21695.
2009-07-16 17:38:09 +00:00
George Bosilca
dc9370598f This looks more like the correct solution. We only pack the known information, so
we can now deal with partial mapping without segfaulting.

This commit was SVN r21688.
2009-07-15 20:06:45 +00:00
George Bosilca
d66632fdc9 Reorder the nidmap encoding function. Add a check to make sure we don't write
outside the boundaries of the allocated array.

However, the problem is still there. If we have rmaps file containing only
partial information the num_procs get set to the wrong value (the number of
hosts in the rmaps file instead of the number of processes requested on the
command line).

This commit was SVN r21686.
2009-07-15 19:36:53 +00:00
Ralph Castain
60edbc7220 Fix hetero operations and comm_spawn (to a point).
Remove all architecture references from ORTE and put them back in the modex using modex_send/recv calls.

Hetero operations are now fully supported again. Comm_spawn now works up to the point where it segfaults due to an error in the CID code - which now allows Edgar to dig further! :-)

This commit was SVN r21655.
2009-07-13 20:03:41 +00:00
Ralph Castain
50bd635200 Also require that the routed framework be initialized before attempting to use orte_show_help
This commit was SVN r21638.
2009-07-12 10:50:14 +00:00
Ralph Castain
e30826c6e1 Quiet some compiler warnings
This commit was SVN r21591.
2009-07-02 17:48:36 +00:00
Ralph Castain
dd5e195a7d Don't treat the HNP node entry separately - this was just a holdover from the days when we didn't have the regex generator.
Ensure we get an accurate count of the number of daemons in the system.

This commit was SVN r21582.
2009-07-01 20:46:05 +00:00
Ralph Castain
f832352b45 Clean up some compiler warnings
This commit was SVN r21577.
2009-07-01 16:51:11 +00:00
Ralph Castain
2b4f051b7f Cleanup some indexing bugs so that shared memory can function
This commit was SVN r21548.
2009-06-26 22:07:25 +00:00
Ralph Castain
b96a71b62e Enable restart of individual processes upon command via the errmgr callback function. It needs an external application to drive this capability, so normal operations shouldn't be affected.
Does not support MPI applications. More work coming to update daemon accounting on movement of procs across nodes.

This commit was SVN r21545.
2009-06-26 20:54:58 +00:00
Ralph Castain
863e57700e Cleanup use of pointer arrays - thanks to Lenny for pointing it out.
This commit was SVN r21529.
2009-06-25 14:08:36 +00:00
Ralph Castain
2e98ba3fd0 Complete implementation of regexp launch with static oob ports. Only enabled for SLURM at this time - migration to Torque coming
This commit was SVN r21516.
2009-06-24 20:31:26 +00:00
Ralph Castain
51ee170f75 Update the pidmap decode logic to handle pidmap updates for restarted processes
This commit was SVN r21506.
2009-06-24 03:05:04 +00:00
Ralph Castain
19062d70e4 Cleanup some of the loops in the nidmap code
This commit was SVN r21505.
2009-06-24 02:47:45 +00:00
Ralph Castain
0ba845fed2 Continue development of regular expression support by implementing it for slurm launches. Works for both initial (cmd line and non-cmd line) and comm_spawn launch.
Additional work required to fully enable static port support when using cmd line regular expression launch system.

This commit was SVN r21502.
2009-06-23 20:25:38 +00:00
Jeff Squyres
ecaa00ba73 Patch from Nadia/Bull from the opal-sos HG branch:
orte_session_dir_finalize doesn't clean the right directories.
orte_session_dir_cleanup neither.

This patch fixes several issues:

 1. orte_session_dir_cleanup():
   1. when jobid is not a wildcard, jobid is used to build the job
      session dir (instead of ORTE_LOCAL_JOBID).
   1. ORTE_SUCCESS is unconditionally returned (instead of rc that
      might have been previously set to another value).
 1. orte_session_dir_finalize():
   1. convert_jobid_to_string is not the right call to get the job
      session dir.
   1. in some places orte_process_info.top_session_dir is directly
      used, without being prefixed with the base directory.

Factorized the code sections that build the job_session_dir into a
single orte_build_job_session_dir() function that is now called by
both orte_session_dir_finalize() and orte_session_dir_cleanup().

Signed-off-by: Nadia Derbey <Nadia.Derbey@bull.net>

This commit was SVN r21498.
2009-06-23 16:07:41 +00:00
Ralph Castain
771ce035a5 Complete implementation of regular expression generator and parser - now handles leading zero's and suffix in node names.
This commit was SVN r21468.
2009-06-18 04:36:00 +00:00
Ralph Castain
8db7a9f9a7 Add regular expression generator to encode complete nid/pid maps - decoder to come.
This commit was SVN r21455.
2009-06-17 02:54:20 +00:00
Ralph Castain
4e0223a638 Add the ability to directly launch procs via rsh/ssh. Collect common functions in plm/base. Create a new global param to set assume_same_shell, alias'd back to plm_rsh_assume_same_shell (not deprecated).
This commit was SVN r21328.
2009-05-30 01:10:25 +00:00
Iain Bason
e7ff2368d6 This fixes trac:1930.
Emit a more informative error message when the file descriptor limit is
reached during an accept() call.  Also, abort when the accept fails to
avoid an infinite loop.

Emit a more informative error message when the help file can't be opened.

This commit was SVN r21271.

The following Trac tickets were found above:
  Ticket 1930 --> https://svn.open-mpi.org/trac/ompi/ticket/1930
2009-05-26 20:03:21 +00:00
Ralph Castain
cc7620c210 Fix orte-ps so it properly ignores/reports stale HNPs, but continues to provide output on running ones. Add a timeout on the send side of the comm so we don't hang while trying to send the info request to the non-existent HNP.
This commit was SVN r21257.
2009-05-21 02:42:21 +00:00
Ralph Castain
f139cfd28a Fully enable the use of static ports to minimize connections on mpirun. When static ports are provided, daemons will automatically use routes defined by the selected routed module to callback to mpirun during startup, thus elimating the dedicated daemon-to-mpirun connection. Therefore, the total number of connections on mpirun will equal the fanout of the routed module (instead of #nodes in job).
Add a new tm ess module that exploits this capability.

Update the various plm modules to enable it - just a minor change reflecting an added param to a plm base function.

Additional fixes included:

1. remove an erroneous cleanup of session directories in the tool finalize procedure - tools don't create session directories to begin with!

2. fix a duplicate free when attempting to execute a non-existent app

3. cleanup an typo in the comm utilities 

4. fix comm_spawn - was perturbed by the changes in pack/unpack of orte_job_t to properly support orte-ps

Been tested on slurm and tm machines, using all tests in orte/test/mpi. May run into issue with command line length on large jobs due to inclusion of node info to support static ports - will fix this next with addition of regexp generator to compress that info.

This commit was SVN r21248.
2009-05-16 04:15:55 +00:00