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Граф коммитов

3497 Коммитов

Автор SHA1 Сообщение Дата
Howard Pritchard
f45914db9b Merge pull request #670 from hppritcha/topic/ownership_update
ownership: update ownership files
2015-06-25 11:02:45 -06:00
rhc54
1a767ed47c Merge pull request #654 from rhc54/topic/config
Remove internal bool type definitions
2015-06-25 09:10:21 -07:00
Howard Pritchard
e49a37c034 ownership: update ownership files
per discussions at OMPI devel workshop

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-06-25 10:04:42 -06:00
Nathan Hjelm
4552afff06 Fix definition of MPI_T_pvar_get_index
The definition of MPI_T_pvar_get_index was incorrect. This commit
fixes the definition and adds a missing return code.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-24 17:31:26 -06:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Ralph Castain
a809902c0a Now that we require C99, and stdbool.h is part of C99, we no longer need to define our own bool types. Since bool is commonly used in a lot of places, just include stdbool.h in opal_config_bottom.h 2015-06-23 11:31:48 -07:00
Ralph Castain
cc9b416ab3 Ensure we properly commit suicide if/when we lose connection to the daemon. There are multiple paths by which a lost daemon can be reported, and so a race condition exists in the pmix support. Our MPI layer wants the ability to determine the response to the failure, and so it will call down to the RTE with any abort request. This comes down to the pmix layer as a "pmix_abort" command, which involves communicating the request to the daemon - who is gone. Sadly, the pmix component may not know that just yet, and so we hang.
So add a brief timer event to kick us out of the communication. The precise amount of time we should wait is somewhat TBD, but set something short for now and we can adjust.
2015-06-18 09:45:52 -07:00
Jeff Squyres
8ab2b11f88 btl_openib.c: fix another compiler warning
Remove this unused variable
2015-06-17 09:00:12 -07:00
Jeff Squyres
f688289aaf btl_openib.c: fix compiler warning
This return code is not used; tell the compiler we're not going to
use it.
2015-06-17 08:56:56 -07:00
Jeff Squyres
097b48d521 mca_base_component_respository.c: fix compiler warning
This function is only used in the DL case -- it can be #if'ed out if
we're not compiling with DL support to avoid a compiler warning about
defined-but-not-used.
2015-06-17 08:54:59 -07:00
Jeff Squyres
dfa36197ea usnic/Makefile.am: ensure static builds include -lfabric 2015-06-17 08:15:29 -07:00
Gilles Gouaillardet
2cef2d0fe6 opal/memory: silence a warning
as reported by Coverity with CID 71663
2015-06-17 11:17:55 +09:00
Gilles Gouaillardet
58d1b3f4d0 opal_os_dirpath_create: fix TOCTOU
as reported by Coverity with CID 70396
2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
de66447ebb opal_cmd_line_get_usage_msg: silence warning
as reported by Coverity with CID 1269967
2015-06-17 11:17:54 +09:00
Gilles Gouaillardet
f2f66e6e63 opal_daemon_init: silence warning
as reported by Coverity with CID 710642
2015-06-17 11:17:53 +09:00
Gilles Gouaillardet
8427e87ee9 opal_argv_delete: silence warning
as reported by Coverity with CID 71914
2015-06-17 11:17:53 +09:00
Gilles Gouaillardet
d9c490cf9f refactor opal_bitmap_get_string
make it more efficient and fix CID 71992 (dead code)
2015-06-17 11:17:53 +09:00
Jeff Squyres
44e7646de9 usnic/configure.m4: convert to use external libfabric
Use the new OPAL_CHECK_LIBFABRIC macro.
2015-06-15 15:17:06 -07:00
Jeff Squyres
3e1b85ceb3 libfabric: remove embedded libfabric
OMPI now only builds against external libfabric installations.
2015-06-15 15:17:05 -07:00
Jeff Squyres
c74ab51dd4 opal/mca/dl/dl.h: fix the #ifndef/#define name
Thanks to Scott Atchley for noticing the name mismatch.
2015-06-15 13:08:57 -07:00
rhc54
adbff46a13 Merge pull request #642 from rhc54/topic/hwloc
Update hwloc to 1.11.0
2015-06-13 12:09:58 -07:00
Ralph Castain
ff92781ec4 Replace hwloc191 with hwloc1110
Fix hwloc compile. Ignore LAMA mapper due to deprecated hwloc functions
2015-06-13 10:11:45 -07:00
Jeff Squyres
4384131e65 openib: minor style and defensive programming fixes
Minor comment/whitespace fixes.  Also some minor logic changes that
are mainly for defensive programming purposes (i.e., ensure to always
set malloc_hook_set to true or false, and then check it before we try
to actually invoke it).
2015-06-12 20:11:47 -07:00
Jeff Squyres
2f137ff151 openib: reset memalign threshhold properly
Now that open-mpi/ompi#638 is fixed, reset the openib BTL memalign
threshhold properly.

This effectively re-instates commit
open-mpi/ompi@ce915b5757.
2015-06-12 20:11:47 -07:00
Jeff Squyres
88c13adc8c openib: only set the memory hook if it is enabled
Instead of unconditionally setting the memory hook, only set it when
the memory hooks are both available and have been enabled (e.g.,
opal/mca/memory/linux has decided that it *can* be enabled, and when
the mpi_leave_pinned MCA param is set to 1, or is set to -1 and some
component requested the memory hooks be enabled).

If we set the memory hook when memory hooks are not enabled,
__malloc_hook will be NULL, which will cause problems when
btl_openib_malloc_hook() tries to invoke it.

Fixes open-mpi/ompi#638.
2015-06-12 20:11:47 -07:00
Ralph Castain
12d3c9ca22 Revert "Fix a typo that incorrectly set the alignment threshold in the openib BTL."
This reverts commit ce915b5757.
2015-06-10 14:02:49 -07:00
Gilles Gouaillardet
8885b34637 mca/base: fix a misc memory leak
as reported by Coverity with CID 1294415
2015-06-10 15:10:57 +09:00
Gilles Gouaillardet
9e278a21ce opal/crs: fix a string overflow
and revamp out of resource handling
fixes resource leak as reported by Coverity with CID 1304752
2015-06-10 14:23:25 +09:00
Nathan Hjelm
6772d32b85 opal/crs: silence clang warnings introduced by coverity fixes
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-06-08 09:16:13 -06:00
Gilles Gouaillardet
bcdb2d1380 add missing #include
sscanf requires stdio.h
fixes commit open-mpi/ompi@6ca57724c4
2015-06-08 09:13:11 +09:00
Jeff Squyres
4b59be4e4c btl tcp: cosmetic changes and updates
No logic changes.

Update some stale/incorrect comments, fix some indenting and style.
2015-06-06 10:17:20 -07:00
Jeff Squyres
d164fe9bc5 opal_params.c: fix typo in comment 2015-06-06 10:17:20 -07:00
Jeff Squyres
0acec2b676 opal/util/net.c: remove stale comment
Also wrap a long "if" statement -- but make no code logic changes.
2015-06-06 10:17:20 -07:00
Jeff Squyres
6ca57724c4 opal/util/net.c: remove superflous #include 2015-06-06 10:17:20 -07:00
Jeff Squyres
cddc8945e0 btl_tcp_proc.c: add missing "continue"
Also add another (superflous but symmetric) continue statement.

This missing "continue" statement allows IPv4 "private network"
matches to fall through and allow IPv6 matches to be made -- thereby
overriding the IPv4 match that was already made.

Fixes #585 (although several of the other issues identified on #585
still exist, the primary / initial bug that was reported there is now
fixed).
2015-06-06 10:17:12 -07:00
Ralph Castain
d9f23627fd Add in hwloc 1.11.0rc1 - will overwrite with final version 2015-06-04 15:35:56 -07:00
Rolf vandeVaart
8622b34664 Check for GPU Direct RDMA and leave pinned turned off 2015-06-04 14:25:24 -04:00
Nathan Hjelm
f72b6d45c7 crs/none: fix coverity issues
CID 1301389 Resource leak (RESOURCE_LEAK)

There is no conceivable reason to strdup cr_argv[0] in either
location. Removed the calls to strdup.

CID 741357 Resource leak (RESOURCE_LEAK)

cr_argv was created by opal_argv_split (tmp_argv[0], ' '). Why should
we call opal_argv_join (' ') on this array. Leak fixed by printing out
tmp_argv[0] instead of calling opal_argv_join.

CID 741358 Resource leak (RESOURCE_LEAK)

The code does not handle exec failure correctly. The error should be
communicated to the parent process but the function in question is
only called by the parent. This calls into question some of the
structure of the function in general (like what is the point of
returning the child process id). That said, I will go ahead and add
the opal_argv_free to quiet this error.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-06-01 16:00:51 -06:00
Nathan Hjelm
7e34997746 event/libevent2022: fix coverity issue
CID 1269841 Out-of-bounds access (OVERRUN)

Correct issue. If the string being concatingated fills the remaining
buffer then a \0 is written past the end of the string. In practice
this should never happen but it should be fixed. I re-organized the
code a bit to clear this error.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-06-01 15:38:54 -06:00
Ralph Castain
ea35e47228 Fat SMPs (i.e., systems with nodes containing large numbers of cpus) were failing to start due to connection failures of the opal/pmix support. Root cause was that (a) we were setting the client socket to non-blocking before calling connect, and (b) the server was using the event library to harvest the accepts, and also did the handshake while in that event. So the server would backup beyond the connection backlog limit, and we would fail.
Changing the client to leave its socket as blocking during the connect doesn't solve the problem by itself - you also have to introduce a sleep delay once the backlog is hit to avoid simply machine-gunning your way thru retries. This gets somewhat difficult to adjust as you don't want to unnecessarily prolong startup time.

We've solved this before by adding a listening thread that simply reaps accepts and shoves them into the event library for subsequent processing. This would resolve the problem, but meant yet another daemon-level thread. So I centralized the listening thread support and let multiple elements register listeners on it. Thus, each daemon now has a single listening thread that reaps accepts from multiple sources - for now, the orte/pmix server and the oob/usock support are using it. I'll add in the oob/tcp component later.

This still didn't fully resolve the SMP problem, especially on coprocessor cards (e.g., KNC). Removing the shared memory dstore support helped further improve the behavior - it looks like there is some kind of memory paging issue there that needs further understanding. Given that the shared memory support was about to be lost when I bring over the PMIx integration (until it is restored in that library), it seemed like a reasonable thing to just remove it at this point.
2015-05-29 14:37:14 -07:00
Nathan Hjelm
7b7993e406 pmix/base: fix coverity issue
CID 1269707 Logically dead code (DEADCODE)

Coverity is correct that tmp3 can never be NULL here. Deleted the dead
code.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 09:02:56 -06:00
Nathan Hjelm
1d27b1f944 pmix/native: fix coverity issue
CID 1269730 Dereference after null check (FORWARD_NULL)

The code checked for cb == NULL before checking for a callback
function but did not have the same protection around the
OBJ_RELEASE(cb).

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 08:48:15 -06:00
Nathan Hjelm
5e2bc2c662 btl/openib: fix coverity issue
CID 1269821 Dereference null return value (NULL_RETURNS)

This is another false positive that can be silenced by looping on
opal_list_remove_first instead of using both opal_list_is_empty and
opal_list_remove_first.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 08:44:03 -06:00
Nathan Hjelm
65472a383f mca/base: add yes/no as valid values for boolean variables
This commit expands the set of accepted values for boolean values to
include yes/no as synonyms for 1/0.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 08:41:51 -06:00
Nathan Hjelm
0d763ea0bc Merge pull request #611 from hjelmn/opal_coverity
btl/openib: more coverity fixes
2015-05-28 13:01:37 -06:00
Nathan Hjelm
b038eb6434 btl/openib: more coverity fixes
CID 1301390 Dereference before null check (REVERSE_INULL)

endpoint can not be NULL here. Remove NULL check.

CID 1269836 Unintentional integer overflow (OVERFLOW_BEFORE_WIDEN)
CID 1301388 Bad bit shift operation (BAD_SHIFT)

Add ull to integer constants to ensure the math is done in 64-bits not
32.

CID 715749 Explicit null dereferenced (FORWARD_NULL)

As far as I can tell this parser function does not accept a line that
does match key = value. If that is the case then value should never be
NULL. If it is it is a parse error. Updated the code to reflect
this. Also modified the intify function to do something more sane
(strtol vs atoi with hex detection).

CID 1269820 Dereference null return value (NULL_RETURNS)

This is a false positive as strchr will never return NULL here. It
makes sense, though, to quiet the warning by changing the do {} while
() loop to a while () loop.

CID 1269780 Dereference after null check (FORWARD_NULL)

Just return an error if the endpoint's cpc data is NULL.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-28 11:58:17 -06:00
Nathan Hjelm
9c170a8c00 Merge pull request #608 from hjelmn/opal_coverity
Opal coverity fixes
2015-05-28 09:06:31 -06:00
Nathan Hjelm
ceb319170a btl/openib: fix more coverity issues
CID 1269674 Ignoring number of bytes read (CHECKED_RETURN)

Check that we read enough bytes to get a complete async command.

CID 1269793 Missing break in switch (MISSING_BREAK)

Added comment to indicate fall through was intentional.

CID 1269702: Constant variable guards dead code (DEADCODE)

Remove an unused argument to opal_show_help. This will quiet the
coverity issue.

CID 1269675 Ignoring number of bytes read (CHECKED_RETURN)

Check that at least sizeof(int) bytes are read. If this is not the
case then it is an error.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-28 08:38:10 -06:00
Nathan Hjelm
9353fcea95 crs/base: fix coverity issues
CID 1196720 Resource leak (RESOURCE_LEAK)
CID 1196721 Resource leak (RESOURCE_LEAK)

The code in question does leak loc_token and loc_value. Cleaned up the
code a bit and plugged the leak.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-28 08:38:10 -06:00
Nathan Hjelm
0e3c32a98a opal/sys_limits: fix coverity issue
CID 996175 Dereference before null check (REVERSE_NULL)

If lims is NULL then we ran out of memory. Return an error and remove
the NULL check at cleanup.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-28 08:38:10 -06:00