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Автор SHA1 Сообщение Дата
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Josh Hursey
99144db970 Improve checkpoint/restart support by allowing a checkpoint to progress when the process is *not* in the MPI library. This involves creating a separate thread for polling for a checkpoint request. This thread is active when the MPI process is not in the MPI library, and paused when the MPI process is in the library.
Some MPI C interface files saw some spacing changes to conform to the coding standards of Open MPI.

Changed MPI C interface files to use {{{OPAL_CR_ENTER_LIBRARY()}}} and {{{OPAL_CR_EXIT_LIBRARY()}}} instead of just {{{OPAL_CR_TEST_CHECKPOINT_READY()}}}. This will allow the checkpoint/restart system more flexibility in how it is to behave.

Fixed the configure check for {{{--enable-ft-thread}}} so it has a know dependance on {{{--enable-mpi-thread}}} (and/or {{{--enable-progress-thread}}}).

Added a line for Checkpoint/Restart support to {{{ompi_info}}}.

Added some options to choose at runtime whether or not to use the checkpoint polling thread. By default, if the user asked for it to be compiled in, then it is used. But some users will want the ability to toggle its use at runtime.

There are still some places for improvement, but the feature works correctly. As always with Checkpoint/Restart, it is compiled out unless explicitly asked for at configure time. Further, if it was configured in, then it is not used unless explicitly asked for by the user at runtime.

This commit was SVN r17516.
2008-02-19 22:15:52 +00:00
Shiqing Fan
54c7b71cfd Use the correct way of including memchecker.h, which will work with '--with-devel-headers'.
This commit was SVN r17435.
2008-02-12 18:01:17 +00:00
Shiqing Fan
f5792bbda5 merging the memchecker into trunk.
This commit was SVN r17424.
2008-02-12 08:46:27 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
Jeff Squyres
1bdf883277 Oops --- don't need those header files.
This commit was SVN r13000.
2007-01-05 00:08:16 +00:00
Jeff Squyres
75df4ca602 Minor fixes for MPI-level aborting:
- Fix some fpritnf's in ompi_mpi_abort() that incorrectly assumed that
  we were always being invoked from MPI_ABORT (ompi_mpi_abort() may be
  invoked from a bunch of different places)
- Also try to opal_backtrace_print() if opal_bactrace_buffer() is not
  supported. 
- Print a message in MPI_ABORT if we're aborting.

This commit was SVN r12998.
2007-01-04 22:30:28 +00:00
Brian Barrett
566a050c23 Next step in the project split, mainly source code re-arranging
- move files out of toplevel include/ and etc/, moving it into the
    sub-projects
  - rather than including config headers with <project>/include, 
    have them as <project>
  - require all headers to be included with a project prefix, with
    the exception of the config headers ({opal,orte,ompi}_config.h
    mpi.h, and mpif.h)

This commit was SVN r8985.
2006-02-12 01:33:29 +00:00
Jeff Squyres
42ec26e640 Update the copyright notices for IU and UTK.
This commit was SVN r7999.
2005-11-05 19:57:48 +00:00
George Bosilca
71b1cdb5f5 Cleanup the dependencies between the MPI layer and the rest of the ompi files.
Modify the includes to start with the root directory (i.e orte/datatype/datatype.h).

This commit was SVN r7306.
2005-09-12 09:17:44 +00:00
Jeff Squyres
35c141aef6 While we're moving directories around, move ompi/mpi/runtime ->
ompi/runtime, for consistency and parallel-ness will orte/runtime.
Also remove a few useless #includes along the way.

This commit was SVN r6317.
2005-07-03 12:07:29 +00:00
Jeff Squyres
4ab17f019b Rename src -> ompi
This commit was SVN r6269.
2005-07-02 13:43:57 +00:00