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613 Коммитов

Автор SHA1 Сообщение Дата
Noah Evans
ee3517427e Add threads framework
Add a framework to support different types of threading models including
user space thread packages such as Qthreads and argobot:

https://github.com/pmodels/argobots

https://github.com/Qthreads/qthreads

The default threading model is pthreads.  Alternate thread models are
specificed at configure time using the --with-threads=X option.

The framework is static.  The theading model to use is selected at
Open MPI configure/build time.

mca/threads: implement Argobots threading layer

config: fix thread configury

- Add double quotations
- Change Argobot to Argobots
config: implement Argobots check

If the poll time is too long, MPI hangs.

This quick fix just sets it to 0, but it is not good for the
Pthreads version. Need to find a good way to abstract it.

Note that even 1 (= 1 millisecond) causes disastrous performance
degradation.

rework threads MCA framework configury

It now works more like the ompi/mca/rte configury,
modulo some edge items that are special for threading package
linking, etc.

qthreads module
some argobots cleanup

Signed-off-by: Noah Evans <noah.evans@gmail.com>
Signed-off-by: Shintaro Iwasaki <siwasaki@anl.gov>
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2020-03-27 10:15:45 -06:00
Austen Lauria
04a3a28a74 Some memchecker cleanup and others.
- Port memchecker call from a1d502c.
- Remove unused memcheck macro variables.
- Some code readability improvements.
- Remove some stray +1's in dynamic comm cleanup.
- Re-add OPAL_ENABLE_DEBUG macro to osc header.
- Cleanup some printf's, and includes.
- Refactor cleanup of dpm_disconnect_objs.

Signed-off-by: Austen Lauria <awlauria@us.ibm.com>
2020-03-05 16:44:18 -05:00
Gilles Gouaillardet
fc2516457b osc/pt2pt: silence valgrind warnings
explicitly add and initialize padding to keep valgrind happy

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2020-03-05 16:10:42 -05:00
bosilca
c4d36859ec
Merge pull request #7228 from devreal/progress-returns
Harmonize return values of progress callbacks
2020-02-28 20:15:37 -05:00
Ralph Castain
86de81baca
Silence a bunch of warnings
Signed-off-by: Ralph Castain <rhc@pmix.org>
2020-02-22 13:05:28 -08:00
Austen Lauria
dd5991f513
Merge pull request #7204 from devreal/shmwin_contig
Correctly set baseptr in contiguous shared memory window with local size zero
2020-02-20 13:22:40 -05:00
Nathan Hjelm
8ee80d8855 osc/rdma: fix bug in attach for non-debug builds
This commit fixes an issue with non-debug builds where adding an
attachment to the attachment list doesn't actually happen. This
causes all MPI_Win_detach calls to fail. The call was within an
assert which is optimized out in optimized builds.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-18 12:59:46 -08:00
Nathan Hjelm
eeb3d7f845
Merge pull request #7387 from hjelmn/osc_rdma_allow_overlapping_registration_regions_and_return_the_correct_error_code_when_regions_overlap
osc/rdma: modify attach to check for region overlap
2020-02-17 14:26:53 -07:00
Nathan Hjelm
54c8233f4f osc/rdma: bump the default max dynamic attachments to 64
This commit increaes the osc_rdma_max_attach variable from 32
to 64. The new default is kept low due to the small number
of registration resources on some systems (Cray Aries). A
larger max attachement value can be set by the user on other
systems.

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-16 17:09:20 -08:00
Nathan Hjelm
6649aef8bd osc/rdma: modify attach to check for region overlap
This commit addresses two issues in osc/rdma:

 1) It is erroneous to attach regions that overlap. This was being
    allowed but the standard does not allow overlapping attachments.

 2) Overlapping registration regions (4k alignment of attachments)
    appear to be allowed. Add attachment bases to the bookeeping
    structure so we can keep better track of what can be detached.

It is possible that the standard did not intend to allow #2. If that
is the case then #2 should fail in the same way as #1. There should
be no technical reason to disallow #2 at this time.

References #7384

Signed-off-by: Nathan Hjelm <hjelmn@google.com>
2020-02-16 17:09:06 -08:00
Tsubasa Yanagibashi
a07a83d189 osc/sm: fix typo and minor correction
- fix a typo `alloc_shared_contig` to `alloc_shared_noncontig`
- correct the value of `blocking_fence`

Signed-off-by: Tsubasa Yanagibashi <fj2505dt@aa.jp.fujitsu.com>
2020-02-14 17:52:56 +09:00
Joseph Schuchart
2c97187ee0 Harmonize return values of progress callbacks
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2020-01-28 20:15:03 +01:00
Austen Lauria
3c0fa537c2
Merge pull request #7113 from devreal/osc_rdma_cas
RDMA osc: perform CAS in shared memory if possible
2020-01-28 10:59:17 -05:00
Joseph Schuchart
06bbcf4fd6 Correctly set baseptr in contiguous shared memory window with local size zero
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-11-28 11:04:30 +01:00
Joseph Schuchart
02dd877d8a RDMA osc: perform CAS in shared memory if possible
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-10-28 11:24:16 +01:00
Austen Lauria
aa8be9c12d
Merge pull request #6284 from devreal/ompi-rdma-memalign
Ensure proper alignment of memory provided by MPI
2019-10-25 12:27:58 -04:00
Austen Lauria
ecd990a67c
Merge pull request #6933 from devreal/osc-ucx-excl-lock
UCX osc: properly release exclusive lock to avoid lockup
2019-10-25 09:16:51 -04:00
Joseph Schuchart
c385c927fb Ensure proper alignment of memory provided by MPI
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-10-01 11:54:29 +02:00
Nathan Hjelm
c4d0752036
Merge pull request #6803 from guserav/fix-osc-sm-post-32-bit-atomics
Fix osc sm posts when only 32 bit atomics support
2019-08-27 18:23:48 -07:00
Joseph Schuchart
a5cc380416 UCX osc: properly release exclusive lock to avoid lockup
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-08-27 23:01:35 +02:00
Tomislav Janjusic
d5f6b088ae osc/ucx: Fix error path
Signed-off-by: Tomislav Janjusic <tomislavj@mellanox.com>
2019-08-12 21:54:01 +03:00
Nysal Jan K.A
3529d44702 osc/ucx: Fix data corruption with non-contiguous accumulates
Signed-off-by: Nysal Jan K.A <jnysal@in.ibm.com>
2019-07-24 13:07:59 +05:30
Nysal Jan K.A
14808922cf osc/ucx: Add support for the no_locks info key
Signed-off-by: Nysal Jan K.A <jnysal@in.ibm.com>
2019-07-18 17:29:01 +05:30
guserav
3c9f4e6823 Fix osc sm posts when only 32 bit atomics support
Signed-off-by: guserav <erik.zeiske@hpe.com>
2019-07-09 15:13:25 -07:00
Geoff Paulsen
f1b2a09675
Merge pull request #6649 from devreal/rdma-fetchop-local
OSC rdma: make sure accumulating in shared memory is safe
2019-06-28 14:46:21 -05:00
Artem Polyakov
6678ac0f55 osc/ucx: Fix possible win creation/destruction race condition
To avoid fully initializing the osc/ucx component for MPI application
that are not using One-Sided functionality, the initialization happens
at the first MPI window creation.

This commit ensures atomicity of global state modifications.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-06-20 09:05:03 -07:00
Artem Polyakov
0857742624 osc/ucx: Fix worker pool finalization
Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-06-20 09:05:03 -07:00
Joseph Schuchart
8f27cc26d9 OSC rdma win allocate: synchronize error codes across shared memory group
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-06-07 11:03:21 +02:00
Yossi Itigin
9d1994b906 OSC/UCX: Fix deadlock with atomic lock
Atomic lock must progress local worker while obtaining the remote lock,
otherwise an active message which actually releases the lock might not
be processed while polling on local memory location.

Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2019-05-19 20:10:09 +03:00
Joseph Schuchart
c67e229193 OSC rdma: make sure accumulating in shared memory is safe
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2019-05-10 17:27:10 +02:00
Nathan Hjelm
4345308dfd osc/rdma: fix CAS 32-bit network atomic compatibility check
When checking for btl compatibility with 32-bit CAS osc/rdma was
checking the incorrect flag field.

Signed-off-by: Nathan Hjelm <hjelmn@cs.unm.edu>
2019-05-10 07:27:53 -06:00
Mikhail Brinskii
2ef5bd8b36 SPML/UCX: Add shmemx_alltoall_global_nb routine to shmemx.h
The new routine transfers the data asynchronously from the source PE to all
PEs in the OpenSHMEM job. The routine returns immediately. The source and
target buffers are reusable only after the completion of the routine.
After the data is transferred to the target buffers, the counter object
is updated atomically. The counter object can be read either using atomic
operations such as shmem_atomic_fetch or can use point-to-point synchronization
routines such as shmem_wait_until and shmem_test.

Signed-off-by: Mikhail Brinskii <mikhailb@mellanox.com>
2019-04-26 14:47:58 +03:00
Valentin Petrov
30970bdfdf OSC/UCX: correctly handle NULL origin addr and MPI_NO_OP
Addtional bugfix: origin_addr -> result_addr for no_op, replace_op
    and sum_op fetch destination.

Signed-off-by: Valentin Petrov <valentinp@mellanox.com>
2019-04-17 10:30:21 +03:00
Artem Polyakov
bfff5783f9
Merge pull request #6371 from artpol84/osc/select_dbg
osc/base: Add debug output stating a selected component
2019-03-22 22:24:04 -07:00
Nathan Hjelm
73085e9ce3
Merge pull request #6413 from nuriallv/issue_osc_rdma
osc/rdma: fix when determining the node with the rank_array info for a peer
2019-02-27 16:30:06 -07:00
Nuria Losada
3cae149262 osc/rdma: fix when determining the node with the rank_array info for a peer
Signed-off-by: Nuria Losada <nlosada@icl.utk.edu>
2019-02-20 13:12:00 -05:00
Artem Polyakov
13a8e42108
Merge pull request #6163 from artpol84/osc/mt_submission
Refactoring of osc/ucx component for MT
2019-02-20 09:41:27 -08:00
Gilles Gouaillardet
fe05fcc11a osc/rdma: correctly handle communications to self
mark the "self" peer OMPI_OSC_RDMA_PEER_LOCAL_BASE when
the window is dynamically created and use_cpu_atomics is set
in order to correctly handle communications to self.

Thanks Bart Janssens for reporting this issue.

Refs. open-mpi/ompi#6394

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-02-20 09:52:17 +09:00
Artem Polyakov
19e2ae2efb opal/common/ucx: Switch to opal/tsd
Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Artem Polyakov
7984d7d997 opal/common/ucx: Remove unused debugging macro
Will be reintroduced later if needed and after adaptation to the OMPI
infrastructure.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Artem Polyakov
43f16d8796 opal/common/ucx: Remove common_ucx_int.h
Place the content of common_ucx_int.h back to the common_ucx.h and
include common_ucx_wpool.h explicitly.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Xin Zhao
c6de09940f ompi/osc/ucx: Switch osc/ucx code to use Worker Pool.
Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Artem Polyakov
35090b69f1 osc/base: Add debug output stating a selected component
Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-07 15:54:20 -08:00
Yossi Itigin
83cca9d52a ucx: add owner.txt for components
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2018-12-01 17:14:03 +02:00
Nathan Hjelm
5ebcbe444e
Merge pull request #6083 from devreal/rdma-plug-memleak
Plug two memory leaks in rdma osc
2018-11-27 09:56:19 -07:00
Sergey Oblomov
2d230b3aac OSC/UCX: set max level value to 60
Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-11-27 14:20:28 +02:00
Yossi Itigin
ed967d867b
Merge pull request #6073 from hoopoepg/topic/set-osc-ucx-level-200
OSC: set UCX module used by default
2018-11-22 10:53:37 +02:00
Joseph Schuchart
91885f5876 Plug two memory leaks in rdma osc
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
2018-11-14 14:31:54 -05:00
Sergey Oblomov
e91f214982 OSC/UCX: added UCX version evaluation
- added UCX version evaluation to set OSC UCX priority

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2018-11-14 10:03:13 +02:00
KAWASHIMA Takahiro
cacd6f389c datatype: Remove #if HAVE_[TYPE] for C99 types
Now Open MPI requires a C99 compiler. Checking availability of
the following types is no more needed.

- `long long` (`signed` and `unsigned`)
- `long double`
- `float _Complex`
- `double _Complex`
- `long double _Complex`

Furthermore, the `#if HAVE_[TYPE]` style checking is not correct.
Availability of C types is checked by `AC_CHECK_TYPES` in `configure.ac`.
`AC_CHECK_TYPES` defines macro `HAVE_[TYPE]` as `1` in `opal_config.h`
if the `[TYPE]` is available. But it does not define `HAVE_[TYPE]`
(instead of defining as `0`) if it is not available. So even if we
need `HAVE_[TYPE]` checking, it should be `#if defined(HAVE_[TYPE])`.

I didn't remove `AC_CHECK_TYPES` for these types in `configure.ac`
since someone may use `HAVE_[TYPE]` macros somewhere.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-11-14 09:32:52 +09:00