1
1
Граф коммитов

453 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
6751409c32 ompi/win: save value of accumulate_ops info key on window
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-09-21 16:37:29 -06:00
Gilles Gouaillardet
fe351f6801 io: do not cast way the const modifier when this is not necessary
update the io framework and mpi c bindings
2015-09-09 09:18:58 +09:00
Gilles Gouaillardet
e01bac962f coll: do not cast way the const modifier when this is not necessary
update the coll framework and mpi c bindings
2015-09-09 09:18:57 +09:00
Gilles Gouaillardet
6e6a3e965c pml: do not cast way the const modifier when this is not necessary
update the pml framework and mpi c bindings
2015-09-09 09:18:57 +09:00
Gilles Gouaillardet
43ef261d46 topo: do not cast way the const modifier when this is not necessary
update the topo framework and mpi c bindings
2015-09-09 09:18:57 +09:00
Ralph Castain
e6add86e4f Deal with connect/accept between two jobs from different mpirun's. Somewhat optimize connect/accept by using MPI bcast to distribute the participants instead of another PMIx lookup. Cleanup some Coverity issues. 2015-09-07 09:19:24 -07:00
Ralph Castain
f6948c2bb4 Sync with PMIx master 43e45c3. Get multi-node publish/lookup/unpublish working 2015-09-04 10:07:17 -07:00
Ralph Castain
a772b46c15 Bring the MPI_Publish and friends online 2015-09-02 12:04:07 -07:00
Gilles Gouaillardet
21642a2407 osc: do not cast way the const modifier when this is not necessary
update the osc framework and mpi c bindings
2015-08-31 10:34:05 +09:00
Gilles Gouaillardet
21b1e7f8c5 mpi conformance: fix prototypes
- MPI_Compare_and_swap
- MPI_Fetch_and_op
- MPI_Raccumulate
- MPI_Win_detach

Thanks to Michael Knobloch and Takahiro Kawashima for bringing this
to our attention
2015-08-31 10:34:05 +09:00
Ralph Castain
cf6137b530 Integrate PMIx 1.0 with OMPI.
Bring Slurm PMI-1 component online
Bring the s2 component online

Little cleanup - let the various PMIx modules set the process name during init, and then just raise it up to the ORTE level. Required as the different PMI environments all pass the jobid in different ways.

Bring the OMPI pubsub/pmi component online

Get comm_spawn working again

Ensure we always provide a cpuset, even if it is NULL

pmix/cray: adjust cray pmix component for pmix

Make changes so cray pmix can work within the integrated
ompi/pmix framework.

Bring singletons back online. Implement the comm_spawn operation using pmix - not tested yet

Cleanup comm_spawn - procs now starting, error in connect_accept

Complete integration
2015-08-29 16:04:10 -07:00
Nathan Hjelm
b8356dae05 ompi/win: add internal support for returning same_size and same_disp_unit info keys
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-08-13 13:19:52 -06:00
Jeff Squyres
2409fa166b get_library_version: checking string constants vs. NULL is dead code
The prior code was checking string constants (which are #defines from
configure) against NULL.  They can never be NULL, so the checks were
overly-defensive.  If the preprocessor macros do not exist, we'll get
a different compiler error.  So remove the dead code.

This fixes CID 72349.
2015-08-12 05:35:12 -07:00
Nysal Jan K.A
5a7bd898f9 Fix an invalid memory access in mrecv & imrecv
After the call to PML mrecv/imrecv, the message handle
is set to MPI_MESSAGE_NULL. Use the cached communicator
while invoking the error handler.
2015-07-30 19:52:40 +05:30
Jeff Squyres
5e159feb5a get_library_version: always use "X.Y.Z" version number format
Fix one last place where we would write only "X.Y" if Z was 0 (we now
always write all three X, Y, Z values, even if Z is zero).
2015-07-25 08:01:36 -04:00
Gilles Gouaillardet
46a87cabf0 fix comment in ompi/mpi/c/group_{excl,incl}.c
no code change
2015-07-21 10:29:55 +09:00
Edgar Gabriel
01f752a504 make the c interface functions compile and work and start with the fortran interface functions. 2015-07-09 10:58:13 -05:00
Edgar Gabriel
f2af8e94ff - first cut on the io interface changes
- add the C interfaces for the new non-blocking collective I/O functions of MPI 3.1
2015-07-09 10:58:13 -05:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Nathan Hjelm
090922887b win_get_attr: fix coverity issues
CID 71734 Self assignment (NO_EFFECT)

This code has no effect. The original author of the offending code
does not remember why the self-assignment is there. Fortran
MPI_Win_get_attr tests are working with or without it so remove the
code.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-06-09 09:34:26 -06:00
Nathan Hjelm
b1c100c402 win_get_info: fix indentation
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 10:16:25 -06:00
Nathan Hjelm
61fe2cc629 win: add support for returning non_locks info key
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 08:35:01 -06:00
Gilles Gouaillardet
899fb89392 MPI_Sendrecv_replace : use the right process convertor 2015-05-26 16:59:36 +09:00
George Bosilca
3af8dfd3e2 Fix a overwrite of the args buffer identified by Lisandro Dalcin. 2015-05-07 09:50:39 -04:00
Jeff Squyres
10b93e3f6f cart_rank: protect against (cart==NULL) possibilities
This was CID 1041230
2015-02-24 15:24:09 -05:00
Jeff Squyres
20465badcb dims_create.c: fix minor error leak in error condition
This was CID 70278.
2015-02-12 10:24:02 -08:00
Nick Papior Andersen
3deda3dc82 Added several new COMM_TYPE_<> splits
Using the underlying hardware identification to split
communicators based on locality has been enabled using
the MPI_Comm_Split_Type function.

Currently implemented split's are:
  HWTHREAD
  CORE
  L1CACHE
  L2CACHE
  L3CACHE
  SOCKET
  NUMA
  NODE
  BOARD
  HOST
  CU
  CLUSTER

However only NODE is defined in the standard which is why the
remaning splits are referred to using the OMPI_ prefix instead
of the standard MPI_ prefix.

I have tested this using --without-hwloc and --with-hwloc=<path>
which both give the same output.

NOTE: I think something fishy is going on in the locality operators.
In my test-program I couldn't get the correct split on these requests:
  NUMA, SOCKET, L3CACHE
where I suspected a full communicator but only got one.
2014-12-24 11:21:35 +00:00
George Bosilca
d4edd097c0 Allow for native timer (cycle level) integration
for MPI_Wtime and MPI_Wtick.
2014-11-24 00:45:14 -05:00
Gilles Gouaillardet
64c18686b7 fix ompi_request_wait vs ompi_request_wait_all and
MPI_STATUS_IGNORE vs MPI_STATUSES_IGNORE
2014-11-04 12:16:30 +09:00
Ralph Castain
2ec59acac4 Silence a slew of warnings when --enable-memchecker is given. Reviewed by Jeff 2014-10-22 13:59:08 -07:00
Jeff Squyres
413e775dbf version configury: make dist now works
Update the VERSION file scheme:

* Remove "want_repo_rev".
* Add "tarball_version".

All values are now always included (major, minor, release, greek,
repo_rev).  However, configure.ac now runs "opal_get_version.sh
... --tarball", which will return the value of tarball_version (if it
is non-empty) or the "full" version string (i.e.,
"major.minor.releasegreek").
2014-10-02 11:32:54 -07:00
Gilles Gouaillardet
e71452d73a Revert r32696
This commit was SVN r32697.

The following SVN revision numbers were found above:
  r32696 --> open-mpi/ompi@e4c3500166
2014-09-10 04:35:47 +00:00
Gilles Gouaillardet
e4c3500166 Fix MPI_Status_set_elements[_x] for non predefined datatypes
Fixes trac:4896

cmr=v1.8.3:reviewer=bosilca

This commit was SVN r32696.

The following Trac tickets were found above:
  Ticket 4896 --> https://svn.open-mpi.org/trac/ompi/ticket/4896
2014-09-10 02:41:29 +00:00
Ralph Castain
aae1bb4f44 Silence warning
This commit was SVN r32657.
2014-08-31 08:10:35 +00:00
Jeff Squyres
d85527701a Fix MPI_COMM_SPLIT_TYPE with MPI_UNDEFINED
Thanks to Lisandro Dalcin for identifying the problem.

Fixes trac:4876

Submitted by George Boscila, reviewed by Jeff Squyres.

cmr=v1.8.3:reviewer=ompi-rm1.8

This commit was SVN r32615.

The following Trac tickets were found above:
  Ticket 4876 --> https://svn.open-mpi.org/trac/ompi/ticket/4876
2014-08-27 12:17:33 +00:00
George Bosilca
8de93982d5 Correctly build the args for the hindexed_block datatype.
cmr=v1.8.3:reviewer=jsquyres

This commit was SVN r32613.
2014-08-27 03:45:07 +00:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
Gilles Gouaillardet
77184b5c4c Fix a cornercase with MPI_PROC_NULL persistent requests
Handle OMPI_REQUEST_NOOP in MPI_Startall rather than PML

cmr=v1.8.2:reviewer=bosilca:ticket=4764

This commit was SVN r32213.

The following Trac tickets were found above:
  Ticket 4764 --> https://svn.open-mpi.org/trac/ompi/ticket/4764
2014-07-11 04:37:01 +00:00
George Bosilca
2861419661 Correct trivial typos in man files and FUNC_NAME variables.
Patch provided by Fujitsu (Kawashima, Takahiro)

cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r32190.
2014-07-10 01:47:23 +00:00
Gilles Gouaillardet
bd72628a9d Cleanup : fix the cornercase with MPI_PROC_NULL persistent requests.
This commit was SVN r32140.
2014-07-04 07:20:44 +00:00
Gilles Gouaillardet
8d3bea2771 Fix the cornercase with MPI_PROC_NULL persistent requests.
This corner case is now handled in the pml so the same code
is invoked for both MPI_Start and MPI_Startall.
This also correctly report an error if MPI_Startall is invoked twice
on a MPI_PROC_NULL persistent request.

This commit was SVN r32139.
2014-07-04 04:58:52 +00:00
George Bosilca
843ef1fcb0 ompi_mpi_abort had one extra argument that was never used. Clean it up.
This commit was SVN r32124.
2014-07-03 00:34:44 +00:00
Ralph Castain
f3cb124e50 Revert r32082 and r32070 - the developer's conference has decided to go a different direction on the threaded progress effort. This will involve some degree of prototyping to understand the tradeoffs prior to making a final design decision, and so we'll hold off on the final change until that is completed.
This commit was SVN r32089.

The following SVN revision numbers were found above:
  r32070 --> open-mpi/ompi@12d92d0c22
  r32082 --> open-mpi/ompi@aa6438ef7a
2014-06-25 20:43:28 +00:00
Ralph Castain
12d92d0c22 Per the OMPI developer conference, remove the last vestiges of OMPI_USE_PROGRESS_THREADS
This commit was SVN r32070.
2014-06-24 17:05:11 +00:00
Gilles Gouaillardet
e9ed9def02 Fix MPI_Alltoallv in coll/tuned
This changeset :
- always call the low/level implementation for :
  * MPI_Alltoallv
  * MPI_Neighbor_alltoallv
  * MPI_Alltoallw
  * MPI_Neighbor_alltoallv
- fix mca_coll_tuned_alltoallv_intra_basic_inplace
  so zero size types are correctly handled

cmr=v1.8.2:reviewer=bosilca:ticket=4715

This commit was SVN r32013.

The following Trac tickets were found above:
  Ticket 4715 --> https://svn.open-mpi.org/trac/ompi/ticket/4715
2014-06-17 06:11:34 +00:00
Nathan Hjelm
37ae430424 rma: fix locking/unlocking of MPI_PROC_NULL
It is valid to lock/unlock MPI_PROC_NULL. It probably isn't work tracking
whether MPI_PROC_NULL is locked for MPI_PROC_NULL RMA operations so this
is probably the permanent solution.

Closes trac:4720

Tracking the 1.8.2 issue with this CMR.

cmr=v1.8.2:reviewer=bbenton

This commit was SVN r32011.

The following Trac tickets were found above:
  Ticket 4720 --> https://svn.open-mpi.org/trac/ompi/ticket/4720
2014-06-17 04:41:49 +00:00
George Bosilca
84193fff6d More comprehensible error messages.
This commit was SVN r32007.
2014-06-16 20:23:16 +00:00
Gilles Gouaillardet
1a17a2a960 Fixes MEMCHECKER vs MPI_IN_PLACE in *alltoall*
cmr=v1.8.2:reviewer=bosilca

This commit was SVN r31924.
2014-06-02 04:43:48 +00:00
Gilles Gouaillardet
40f3b849eb Fix argument checks for [i]neighbor_alltoall{v|w}
This fixes a bug introduced in :
 - r31815 (trunk) 
 - r31853 (v1.8 branch)

cmr=v1.8.2:reviewer=bosilca

This commit was SVN r31888.

The following SVN revision numbers were found above:
  r31815 --> open-mpi/ompi@8bafe06c57
  r31853 --> open-mpi/ompi@bff944d766
2014-05-23 08:19:17 +00:00
Gilles Gouaillardet
c496131eef Fixes *alltoall* collectives at top
- fix bugs
 - silent warnings

cmr=v1.8.2:ticket=4651:reviewer=bosilca

This commit was SVN r31831.

The following Trac tickets were found above:
  Ticket 4651 --> https://svn.open-mpi.org/trac/ompi/ticket/4651
2014-05-20 05:32:57 +00:00