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105 Коммитов

Автор SHA1 Сообщение Дата
Gilles Gouaillardet
fed33c1530 pml/ob1: plug a memory leak in mca_pml_ob1_component_fini()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-08-30 10:07:17 +09:00
Matthew Dosanjh
572694b621 Adding custom match source.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-08-02 12:23:08 -06:00
George Bosilca
6ff11267fb
Remove warnings identified by clang.
Plus minor spacing and indentation issues.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-04-14 17:14:12 -04:00
George Bosilca
d261282029
OB1 pvars should be linked with the OB1 component.
If not the pvars will remain valid after the OB1 PML is unloaded, and
any access will segfault (the callbacks associated with the pvar will
point to the memory of the dlclosed module).

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2017-11-03 01:18:26 -04:00
George Bosilca
050bd3b6d7
Make the pipeline depth an int instead of a size_t. While
they are supposed to be unsigned, casting them to a signed
value for all atomic operations is as errorprone as handling
them as signed entities.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2017-09-01 18:52:48 -04:00
Nathan Hjelm
3e7ef48c13 pml/ob1: do not cache leave_pinned
This commit fixes a bug that disabled both the RDMA pipeline and RDMA
protocols in ob1. ob1 was internally caching the values of
opal_leave_pinned and opal_leave_pinned_pipeline at init time. This is
no longer valid as opal_leave_pinned may be set by any call to a btl's
add_procs.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2017-03-14 09:00:40 -06:00
Ralph Castain
1e2019ce2a Revert "Update to sync with OMPI master and cleanup to build"
This reverts commit cb55c88a8b7817d5891ff06a447ea190b0e77479.
2016-11-22 15:03:20 -08:00
Ralph Castain
cb55c88a8b Update to sync with OMPI master and cleanup to build
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-11-22 14:24:54 -08:00
Nathan Hjelm
4079eec974 pml/ob1: be more selective when using rdma capable btls
This commit updates the btl selection logic for the RDMA and RDMA
pipeline protocols to use a btl iff: 1) the btl is also used for eager
messages (high exclusivity), or 2) no other RDMA btl is available on
an endpoint and the pml_ob1_use_all_rdma MCA variable is true. This
fixes a performance regression with shared memory when an RDMA capable
network is available.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-08-09 20:54:42 -06:00
George Bosilca
f69eba1bc4 Update the copyright and cleanup the code.
Per @jsquyres suggestion remove all trailing spaces.
Credit to `sed -i.bak 's/ *$//' */[ch]`.
2016-03-28 14:41:01 -04:00
Thananon Patinyasakdikul
92062492b9 Enable Threading in the BTL TCP
Added mca parameter to turn progress thread on/off
Add a flag to check if we have btl progress thread.
Added macro for ob1 matching lock.
Update the AUTHORS file.
2016-03-28 14:41:01 -04:00
Nathan Hjelm
d4afb16f5a opal: rework mpool and rcache frameworks
This commit rewrites both the mpool and rcache frameworks. Summary of
changes:

 - Before this change a significant portion of the rcache
   functionality lived in mpool components. This meant that it was
   impossible to add a new memory pool to use with rdma networks
   (ugni, openib, etc) without duplicating the functionality of an
   existing mpool component. All the registration functionality has
   been removed from the mpool and placed in the rcache framework.

 - All registration cache mpools components (udreg, grdma, gpusm,
   rgpusm) have been changed to rcache components. rcaches are
   allocated and released in the same way mpool components were.

 - It is now valid to pass NULL as the resources argument when
   creating an rcache. At this time the gpusm and rgpusm components
   support this. All other rcache components require non-NULL
   resources.

 - A new mpool component has been added: hugepage. This component
   supports huge page allocations on linux.

 - Memory pools are now allocated using "hints". Each mpool component
   is queried with the hints and returns a priority. The current hints
   supported are NULL (uses posix_memalign/malloc), page_size=x (huge
   page mpool), and mpool=x.

 - The sm mpool has been moved to common/sm. This reflects that the sm
   mpool is specialized and not meant for any general
   allocations. This mpool may be moved back into the mpool framework
   if there is any objection.

 - The opal_free_list_init arguments have been updated. The unused0
   argument is not used to pass in the registration cache module. The
   mpool registration flags are now rcache registration flags.

 - All components have been updated to make use of the new framework
   interfaces.

As this commit makes significant changes to both the mpool and rcache
frameworks both versions have been bumped to 3.0.0.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-03-14 10:50:41 -06:00
Nathan Hjelm
bedd80214e pml/ob1: remove priority check
This commit removes code that checks the ob1 priority vs the previous
priority. The previous priority is meaningless here and may only cause
ob1 to disable itself when it shouldn't.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-10-19 12:32:41 -06:00
Nathan Hjelm
54a4061d88 Add support for detecting when dynamic add_procs is not possible
This commit adds support to the pml, mtl, and btl frameworks for
components to indicate at runtime that they do not support the new
dynamic add_procs behavior. At the high end the lack of dynamic
add_procs support is signalled by the pml using the new pml_flags
member to the pml module structure. If the
MCA_PML_BASE_FLAG_REQUIRE_WORLD flag is set MPI_Init will generate the
ompi_proc_t array passed to add_proc from ompi_proc_world () instead
of ompi_proc_get_allocated ().

Both cm and ob1 have been updated to detect if the underlying mtl and
btl components support dynamic add_procs.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-09-23 16:22:05 -06:00
Nathan Hjelm
b4a0d40915 pml/ob1: Add support for dynamically calling add_procs
This commit contains the following changes:

 - pml/ob1: use the bml accessor function when requesting a bml
   endpoint. this will ensure that bml endpoints are only created when
   needed. for example, a bml endpoint is not requested and not
   allocated when receiving an eager message from a peer.

 - pml/ob1: change the pml_procs array in the ob1 communicator to a
   proc pointer array. at the cost of a single level of extra
   redirection this will allow us to allocate pml procs on demand.

 - pml/ob1: add an accessor function to access the pml proc structure
   for a given peer. this function will allocate the proc if it
   doesn't already exist.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-09-10 08:55:54 -06:00
bosilca
1b8556f926 Merge pull request #653 from hjelmn/moar_ob1_fixes
pml/ob1: fix bugs in static request objects
2015-06-24 14:28:11 -07:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Nathan Hjelm
9a8a87611e pml/ob1: fix bugs in static request objects
This commit fixes several bugs in the static request objects used by
ob1 for blocking send/receive operations.

 - Fix memory leak when using MPI_THREAD_MULTIPLE. Requests were
   allocated off the free list but were destructed and NOT returned.

 - Fix double-destruct of static objects. There is no reason to
   CONSTRUCT/DESTUCT the static object for each send/receive
   operation. This adds overhead and no benefit. To keep the code
   clean helper functions have been added to finalize ob1 send/receive
   requests.

 - Remove now unnecessary include of alloca.h.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-23 11:00:45 -06:00
George Bosilca
b2cf74cabc A first cut at a possible solution for the missing requests
from the message queues (a debugging feature). With this approach
all blocking (single threaded) requests are allocated from the main
freelist, so they will be accounted for during the message queues
investigation).
2015-06-12 14:22:17 -07:00
Nathan Hjelm
df75d0382f ompi: use C99 subobject naming for component initialization
This commit helps future-proof ompi components by initializing each
component member by name.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-04-18 10:29:58 -06:00
Nathan Hjelm
5f1254d710 Update code base to use the new opal_free_list_t
Use of the old ompi_free_list_t and ompi_free_list_item_t is
deprecated. These classes will be removed in a future commit.

This commit updates the entire code base to use opal_free_list_t and
opal_free_list_item_t.

Notes:

OMPI_FREE_LIST_*_MT -> opal_free_list_* (uses opal_using_threads ())

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-02-24 10:05:45 -07:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
George Bosilca
db9660264e Update the error message to pinpoint the right location.
Thanks Tim.

This commit was SVN r31839.
2014-05-20 20:08:42 +00:00
George Bosilca
685f051557 Move the allocator initialization from open to init. This clean
a memory leak. Similar changes shuld be applied to all the 
other PML that are copies of OB1. This patch is related to
#4653.

This commit was SVN r31838.
2014-05-20 19:34:18 +00:00
Nathan Hjelm
4113cfa03a pml/ob1: add missing OBJ_DESTRUCT
An OBJ_DESTRUCT was missing for mca_pml_ob1.send_ranges causing a
memory leak. Identified by valgrind.

cmr=v1.8.2:reviewer=jsquyres

This commit was SVN r31768.
2014-05-14 21:15:45 +00:00
George Bosilca
bde9619386 Various minor cleanups.
This commit was SVN r30431.
2014-01-26 17:27:12 +00:00
Nathan Hjelm
f0aeb36d80 Fix warnings in ob1 introduced by the pvar commit
This commit was SVN r28817.
2013-07-17 03:41:05 +00:00
Nathan Hjelm
e6e9f2c6fd Add profiling function definitions for MPI_T and add a missing type into mpi.h
This commit was SVN r28803.
2013-07-16 16:03:33 +00:00
Nathan Hjelm
35673ea400 Add example performance variables to ob1: unexpected message queue length, posted receive length
This commit was SVN r28801.
2013-07-16 16:02:25 +00:00
Nathan Hjelm
9d4a26f47d Update OMPI frameworks to use the MCA framework system.
Notes:
  - This commit also eliminates the need for an available components list in use
    in several frameworks. None of the code in question was making use of the
    priority field of the priority component list item so these extra lists were
    removed.
  - Cleaned up selection code in several frameworks to sort lists using opal_list_sort.
  - Cleans up the ompi/orte-info functions. Expose the functions that construct the
    list of params so they can be used elsewhere.

patches for mtl/portals4 from brian

missed a few output variables in openib

This commit was SVN r28241.
2013-03-27 21:17:31 +00:00
Nathan Hjelm
cf377db823 MCA/base: Add new MCA variable system
Features:
 - Support for an override parameter file (openmpi-mca-param-override.conf).
   Variable values in this file can not be overridden by any file or environment
   value.
 - Support for boolean, unsigned, and unsigned long long variables.
 - Support for true/false values.
 - Support for enumerations on integer variables.
 - Support for MPIT scope, verbosity, and binding.
 - Support for command line source.
 - Support for setting variable source via the environment using
   OMPI_MCA_SOURCE_<var name>=source (either command or file:filename)
 - Cleaner API.
 - Support for variable groups (equivalent to MPIT categories).

Notes:
 - Variables must be created with a backing store (char **, int *, or bool *)
   that must live at least as long as the variable.
 - Creating a variable with the MCA_BASE_VAR_FLAG_SETTABLE enables the use of
   mca_base_var_set_value() to change the value.
 - String values are duplicated when the variable is registered. It is up to
   the caller to free the original value if necessary. The new value will be
   freed by the mca_base_var system and must not be freed by the user.
 - Variables with constant scope may not be settable.
 - Variable groups (and all associated variables) are deregistered when the
   component is closed or the component repository item is freed. This
   prevents a segmentation fault from accessing a variable after its component
   is unloaded.
 - After some discussion we decided we should remove the automatic registration
   of component priority variables. Few component actually made use of this
   feature.
 - The enumerator interface was updated to be general enough to handle
   future uses of the interface.
 - The code to generate ompi_info output has been moved into the MCA variable
   system. See mca_base_var_dump().

opal: update core and components to mca_base_var system
orte: update core and components to mca_base_var system
ompi: update core and components to mca_base_var system

This commit also modifies the rmaps framework. The following variables were
moved from ppr and lama: rmaps_base_pernode, rmaps_base_n_pernode,
rmaps_base_n_persocket. Both lama and ppr create synonyms for these variables.

This commit was SVN r28236.
2013-03-27 21:09:41 +00:00
Nathan Hjelm
2acd0f83de Revert "Revert r27451 and r27456 - the cmd line parser is incorrectly marking the application as an MCA parameter".
It appears the problem was not with the command line parser but the rsh plm. I don't know why this problem was not occuring before the command line parser changes but it appears to be resolved now.

This commit was SVN r27527.

The following SVN revision numbers were found above:
  r27451 --> open-mpi/ompi@d59034e6ef
  r27456 --> open-mpi/ompi@ecdbf34937
2012-10-30 19:45:18 +00:00
Ralph Castain
e6014bf2e1 Revert r27451 and r27456 - the cmd line parser is incorrectly marking the application as an MCA parameter
This commit was SVN r27477.

The following SVN revision numbers were found above:
  r27451 --> open-mpi/ompi@d59034e6ef
  r27456 --> open-mpi/ompi@ecdbf34937
2012-10-24 18:38:44 +00:00
Nathan Hjelm
d59034e6ef MCA: remove deprecated mca_base_param functions (mca_base_param_register_int, mca_base_param_register_string, mca_base_param_environ_variable). Remove all uses of deprecated functions.
cmr:v1.7

This commit was SVN r27451.
2012-10-17 20:17:37 +00:00
Nathan Hjelm
59e529cf1d ob1: as per developer discussion disable rdma retries. the failure path currently suffers from live-lock
This commit was SVN r26575.
2012-06-07 23:31:20 +00:00
Nathan Hjelm
9a35f96bda ob1: add support for get fallback on put/send
This commit was SVN r26329.
2012-04-24 20:18:56 +00:00
Jeff Squyres
b2b781e537 Fix a few miscelaneous memory leaks.
This commit was SVN r24865.
2011-07-08 16:39:58 +00:00
Ralph Castain
fceabb2498 Update libevent to the 2.0 series, currently at 2.0.7rc. We will update to their final release when it becomes available. Currently known errors exist in unused portions of the libevent code. This revision passes the IBM test suite on a Linux machine and on a standalone Mac.
This is a fairly intrusive change, but outside of the moving of opal/event to opal/mca/event, the only changes involved (a) changing all calls to opal_event functions to reflect the new framework instead, and (b) ensuring that all opal_event_t objects are properly constructed since they are now true opal_objects.

Note: Shiqing has just returned from vacation and has not yet had a chance to complete the Windows integration. Thus, this commit almost certainly breaks Windows support on the trunk. However, I want this to have a chance to soak for as long as possible before I become less available a week from today (going to be at a class for 5 days, and thus will only be sparingly available) so we can find and fix any problems.

Biggest change is moving the libevent code from opal/event to a new opal/mca/event framework. This was done to make it much easier to update libevent in the future. New versions can be inserted as a new component and tested in parallel with the current version until validated, then we can remove the earlier version if we so choose. This is a statically built framework ala installdirs, so only one component will build at a time. There is no selection logic - the sole compiled component simply loads its function pointers into the opal_event struct.

I have gone thru the code base and converted all the libevent calls I could find. However, I cannot compile nor test every environment. It is therefore quite likely that errors remain in the system. Please keep an eye open for two things:

1. compile-time errors: these will be obvious as calls to the old functions (e.g., opal_evtimer_new) must be replaced by the new framework APIs (e.g., opal_event.evtimer_new)

2. run-time errors: these will likely show up as segfaults due to missing constructors on opal_event_t objects. It appears that it became a typical practice for people to "init" an opal_event_t by simply using memset to zero it out. This will no longer work - you must either OBJ_NEW or OBJ_CONSTRUCT an opal_event_t. I tried to catch these cases, but may have missed some. Believe me, you'll know when you hit it.

There is also the issue of the new libevent "no recursion" behavior. As I described on a recent email, we will have to discuss this and figure out what, if anything, we need to do.

This commit was SVN r23925.
2010-10-24 18:35:54 +00:00
Rolf vandeVaart
0331889495 Some more spaces, tabs, include file ordering changes.
No real code changes here.  

This commit was SVN r23789.
2010-09-22 13:48:22 +00:00
Ralph Castain
40a2bfa238 WARNING: Work on the temp branch being merged here encountered problems with bugs in subversion. Considerable effort has gone into validating the branch. However, not all conditions can be checked, so users are cautioned that it may be advisable to not update from the trunk for a few days to allow MTT to identify platform-specific issues.
This merges the branch containing the revamped build system based around converting autogen from a bash script to a Perl program. Jeff has provided emails explaining the features contained in the change.

Please note that configure requirements on components HAVE CHANGED. For example. a configure.params file is no longer required in each component directory. See Jeff's emails for an explanation.

This commit was SVN r23764.
2010-09-17 23:04:06 +00:00
Rolf vandeVaart
3bb587937a Just fix up some trailing spaces, tabs instead of spaces,
missing periods on copyrights, extraneous spaces on blank
lines.  No actual code change.

This commit was SVN r23739.
2010-09-10 21:01:52 +00:00
Jeff Squyres
c8bb7537e7 Remove include/opal/sys/cache.h -- its only purpose in life was to
#define CACHE_LINE_SIZE to 128.  This name has a conflict on NetBSD,
and it seems kinda odd to have a header file that ''only'' defines a
single value.  Also, we'll soon be raising hwloc to be a first-class
item, so having this file around seemed kinda weird.

Therefore, I replaced CACHE_LINE_SIZE with opal_cache_line_size, an
int (in opal/runtime/opal_init.c and opal/runtime/opal.h) on the
rationale that we can fill this in at runtime with hwloc info (trunk
and v1.5/beyond, only).  The only place we ''needed'' a compile-time
CACHE_LINE_SIZE was in the BTL SM (for struct padding), so I made a
new BTL_SM_ preprocessor macro with the old CACHE_LINE_SIZE value
(128).  That use isn't suitable for run-time hwloc information,
anyway.

This commit was SVN r23349.
2010-07-06 14:33:36 +00:00
Rolf vandeVaart
0adb570693 Add pml_ob1_verbose flag. Fix the current location it is being used
This commit was SVN r22939.
2010-04-07 13:51:42 +00:00
Rolf vandeVaart
c82e468ede Undo revision r21767 - sorry folks
This commit was SVN r21769.

The following SVN revision numbers were found above:
  r21767 --> open-mpi/ompi@41f38110ff
2009-08-05 22:23:26 +00:00
Rolf vandeVaart
41f38110ff HCA failover support in openib BTL
This commit was SVN r21767.
2009-08-05 21:53:02 +00:00
Jeff Squyres
91415c2996 Some minor valgrind-inspired cleanups: fix some memory leaks
This commit was SVN r20542.
2009-02-13 03:45:11 +00:00
George Bosilca
4747a4bb53 ompi_comm_all allocate memory and retain the objects. Therefore, after
each call to ompi_comm_all we should parse the communicator list and
release the objects ...

This commit was SVN r20525.
2009-02-11 21:48:11 +00:00
Jeff Squyres
d2d06008a0 Change the default value of mpi_leave_pinned to -1, meaning that we'll
figure it out at runtime (really meaning: we'll still default to "0"
unless something explicitly overrides to 1, such as the openib BTL).
This way, ompi_info doesn't confusingly report mpi_leave_pinned==0 for
mpi_leave_pinned, but we end up running with mpi_leave_pinned==1.

Fixes trac:1502.

This commit was SVN r19571.

The following Trac tickets were found above:
  Ticket 1502 --> https://svn.open-mpi.org/trac/ompi/ticket/1502
2008-09-16 22:06:14 +00:00
Jeff Squyres
270f482fea Addendum to r19561: also remove a comment that is no longer true and
some code that is commented out.

This commit was SVN r19564.

The following SVN revision numbers were found above:
  r19561 --> open-mpi/ompi@17e65369be
2008-09-16 13:02:10 +00:00
George Bosilca
acd3406aa7 Never drop messages. No never no more.
This is supposed to fix the ticket #1460.

This commit was SVN r19562.
2008-09-15 23:04:18 +00:00