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137 Коммитов

Автор SHA1 Сообщение Дата
Rainer Keller
781caee0b6 - First of two or three patches, in orte/util/proc_info.h:
Adapt orte_process_info to orte_proc_info, and
   change orte_proc_info() to orte_proc_info_init().
 - Compiled on linux-x86-64
 - Discussed with Ralph

This commit was SVN r20739.
2009-03-05 20:36:44 +00:00
Terry Dontje
0178b6c45f Added padding to predefined handle structures to maintain library version to
version compatibility.

This commit was SVN r20627.
2009-02-24 17:17:33 +00:00
Rainer Keller
d81443cc5a - On the way to get the BTLs split out and lessen dependency on orte:
Often, orte/util/show_help.h is included, although no functionality
   is required -- instead, most often opal_output.h, or               
   orte/mca/rml/rml_types.h                                           
   Please see orte_show_help_replacement.sh commited next.            

 - Local compilation (Linux/x86_64) w/ -Wimplicit-function-declaration
   actually showed two *missing* #include "orte/util/show_help.h"     
   in orte/mca/odls/base/odls_base_default_fns.c and                  
   in orte/tools/orte-top/orte-top.c                                  
   Manually added these.                                              

   Let's have MTT the last word.

This commit was SVN r20557.
2009-02-14 02:26:12 +00:00
Ralph Castain
62dd763a8f Add ability for local slave spawns to pre-position supporting files. Update comm_spawn and comm_spawn_multiple man pages to cover new info_keys.
This commit was SVN r20527.
2009-02-12 15:56:45 +00:00
Ralph Castain
f0af389910 Enable comm_spawn of slave processes, currently only active for the rsh, slurm, and tm environments. Establish support for local rsh environments in the plm/base so that rsh of local slaves can be done by any environment that supports it. Create new orte_rsh_agent param so users can specify rsh agent from outside of rsh plm, and sym link that to the old plm_rsh_agent and pls_rsh_agent options.
Modify the orte-bootproxy to pass prefix for the remote slave to support hetero/hybrid scenarios

This commit was SVN r20492.
2009-02-09 20:44:44 +00:00
Ralph Castain
b100513022 Add a few new MPI_Info options to the dpm - documentation to follow.
Fix a mistake in the dpm that hardcoded the update of routes to the HNP. This needs to be done by the individual routing modules so they can take whatever action is required - which will usually include updating the HNP, but might not...and might include additional steps. New routing modules are coming that violated this assumption, so it had to be moved back into init_routes.

All current routed modules know what to do - anyone with routed modules not in the current trunk may need to adjust them (see any of the current routed modules for examples of what to do).

This commit was SVN r20427.
2009-02-04 22:30:23 +00:00
Jeff Squyres
d1c6f3f89a * Fix a truckload of Cisco copyrights to be the same as the rest of
the code base.
 * Fix a few misspellings in other copyrights.

This commit was SVN r20241.
2009-01-11 02:30:00 +00:00
Shiqing Fan
a5281f0434 - 1/4 commit for Windows Visual Studio and CCP support:
CMakeLists and .windows files.
  In contribs preconfigured and precompiled parts.

This commit was SVN r20108.
2008-12-10 20:59:20 +00:00
George Bosilca
82d1d5d785 The patch for "Unexpected message queue for unknown CID's required" ticket #1460.
I'm unable to split it in two parts, my patch and Edgar's one. So I just update
copyright information for both of us.
What this patch do:
- it use the unexpected queue create by commit r19562 to dispatch the
  unexpected message to the right communicator (once this communicator
  is created and initialized).
- delay the PML comm_add until we have the context_id for the new communicator.
- only do the PML comm_add on processes that really belong to the new
  communicator. Please read the lengthy comment in the source code for the
  reason behind this.

This commit was SVN r19929.

The following SVN revision numbers were found above:
  r19562 --> open-mpi/ompi@acd3406aa7
2008-11-04 21:58:06 +00:00
Ralph Castain
6e5d844c36 Roll in the revamped IOF subsystem. Per the devel mailing list email, this is a complete rewrite of the iof framework designed to simplify the code for maintainability, and to support features we had planned to do, but were too difficult to implement in the old code. Specifically, the new code:
1. completely and cleanly separates responsibilities between the HNP, orted, and tool components.

2. removes all wireup messaging during launch and shutdown.

3. maintains flow control for stdin to avoid large-scale consumption of memory by orteds when large input files are forwarded. This is done using an xon/xoff protocol.

4. enables specification of stdin recipients on the mpirun cmd line. Allowed options include rank, "all", or "none". Default is rank 0.

5. creates a new MPI_Info key "ompi_stdin_target" that supports the above options for child jobs. Default is "none".

6. adds a new tool "orte-iof" that can connect to a running mpirun and display the output. Cmd line options allow selection of any combination of stdout, stderr, and stddiag. Default is stdout.

7. adds a new mpirun and orte-iof cmd line option "tag-output" that will tag each line of output with process name and stream ident. For example, "[1,0]<stdout>this is output"

This is not intended for the 1.3 release as it is a major change requiring considerable soak time.

This commit was SVN r19767.
2008-10-18 00:00:49 +00:00
Aurelien Bouteiller
73edda92db Take into account Ralph's comments. There is no duplicate functionnality with the rml base. Also fix a stupid typo bug.
This commit was SVN r19667.
2008-10-01 02:31:14 +00:00
Aurelien Bouteiller
89a2eea37a Add functions to access the opaque port_string and to add routes to a remote port. This is usefull for FT, but could also turn usefull when considering MPI3 extentions to the MPI2 dynamics.
This commit was SVN r19653.
2008-09-27 13:22:32 +00:00
Ralph Castain
e44ac3f36d Remove some historical, but now unused, cruft
This commit was SVN r19545.
2008-09-11 12:49:11 +00:00
Rainer Keller
33d7c52eed - Fix resource leak in case of error
Coverity CID1066

This commit was SVN r19169.
2008-08-06 08:12:12 +00:00
Jeff Squyres
0af7ac53f2 Fixes trac:1392, #1400
* add "register" function to mca_base_component_t
   * converted coll:basic and paffinity:linux and paffinity:solaris to
     use this function
   * we'll convert the rest over time (I'll file a ticket once all
     this is committed)
 * add 32 bytes of "reserved" space to the end of mca_base_component_t
   and mca_base_component_data_2_0_0_t to make future upgrades
   [slightly] easier
   * new mca_base_component_t size: 196 bytes
   * new mca_base_component_data_2_0_0_t size: 36 bytes
 * MCA base version bumped to v2.0
   * '''We now refuse to load components that are not MCA v2.0.x'''
 * all MCA frameworks versions bumped to v2.0
 * be a little more explicit about version numbers in the MCA base
   * add big comment in mca.h about versioning philosophy

This commit was SVN r19073.

The following Trac tickets were found above:
  Ticket 1392 --> https://svn.open-mpi.org/trac/ompi/ticket/1392
2008-07-28 22:40:57 +00:00
Ralph Castain
a0ae63f19e Ensure we call close_port after comm_spawn[_multiple]. Cleanout the port name in close_port
This commit was SVN r19068.
2008-07-28 16:40:11 +00:00
Ralph Castain
ba5498cdc6 Repair the MPI-2 dynamic operations. This includes:
1. repair of the linear and direct routed modules

2. repair of the ompi/pubsub/orte module to correctly init routes to the ompi-server, and correctly handle failure to correctly parse the provided ompi-server URI

3. modification of orterun to accept both "file" and "FILE" for designating where the ompi-server URI is to be found - purely a convenience feature

4. resolution of a message ordering problem during the connect/accept handshake that allowed the "send-first" proc to attempt to send to the "recv-first" proc before the HNP had actually updated its routes.

Let this be a further reminder to all - message ordering is NOT guaranteed in the OOB

5. Repair the ompi/dpm/orte module to correctly init routes during connect/accept.

Reminder to all: messages sent to procs in another job family (i.e., started by a different mpirun) are ALWAYS routed through the respective HNPs. As per the comments in orte/routed, this is REQUIRED to maintain connect/accept (where only the root proc on each side is capable of init'ing the routes), allow communication between mpirun's using different routing modules, and to minimize connections on tools such as ompi-server. It is all taken care of "under the covers" by the OOB to ensure that a route back to the sender is maintained, even when the different mpirun's are using different routed modules.

6. corrections in the orte/odls to ensure proper identification of daemons participating in a dynamic launch

7. corrections in build/nidmap to support update of an existing nidmap during dynamic launch

8. corrected implementation of the update_arch function in the ESS, along with consolidation of a number of ESS operations into base functions for easier maintenance. The ability to support info from multiple jobs was added, although we don't currently do so - this will come later to support further fault recovery strategies

9. minor updates to several functions to remove unnecessary and/or no longer used variables and envar's, add some debugging output, etc.

10. addition of a new macro ORTE_PROC_IS_DAEMON that resolves to true if the provided proc is a daemon

There is still more cleanup to be done for efficiency, but this at least works.

Tested on single-node Mac, multi-node SLURM via odin. Tests included connect/accept, publish/lookup/unpublish, comm_spawn, comm_spawn_multiple, and singleton comm_spawn.

Fixes ticket #1256

This commit was SVN r18804.
2008-07-03 17:53:37 +00:00
Ralph Castain
3b5e80fa61 Shift responsibility for preconnecting the oob to the orte routed framework, which is the only place that knows what needs to be done. Only the direct module will actually do anything - it uses the same algo as the original preconnect function.
This commit was SVN r18677.
2008-06-19 13:48:26 +00:00
George Bosilca
8e7c35e76c These symbols are only available via the module/component structure, so they
don't have to be globally visible.

This commit was SVN r18666.
2008-06-18 08:20:02 +00:00
Ralph Castain
0532d799d6 Complete implementation of the --without-rte-support configure option. Working with Brian, this has been tested on RedStorm.
Some minor changes to help facilitate debugger support so that both mpirun and yod can operate with it. Still to be completed.

This commit was SVN r18664.
2008-06-18 03:15:56 +00:00
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
Josh Hursey
1de50b523c Fix some Coverity 'Event set_but_not_used' highlights.
Thanks to Jeff for bringing them to my attention.

This commit was SVN r18606.
2008-06-06 14:38:41 +00:00
Ralph Castain
c992e99035 Remove the tags from orte_output_open and the filtering operation from orte_output - this will be handled differently to improve the XML output interface
This commit was SVN r18557.
2008-06-03 14:24:01 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Ralph Castain
ff70636024 Allgather_list needs its own tag to avoid conflicting with the allgather modex operation.
All spawned procs must decode the port of the spawning process so they can communicate in direct routed mode.

This fixes comm_spawn for all routing modes.

This commit was SVN r18395.
2008-05-07 03:03:56 +00:00
Josh Hursey
9971bc9d95 Merge in the mca_base_select changes per RFC:
http://www.open-mpi.org/community/lists/devel/2008/04/3779.php

{{{
svn merge -r 18276:18380 https://svn.open-mpi.org/svn/ompi/tmp-public/jjh-mca-play .
}}}

Any components not in the trunk, but in one of the effected frameworks *must* be
updated. Contact the list, look at the RFC, or look at the diff for how to do this.

Sorry for the early commit of this, but I wanted to get it in today (per RFC) and
didn't know if I would have a chance later today.

This commit was SVN r18381.
2008-05-06 18:08:45 +00:00
Aurelien Bouteiller
611d52fa95 Fix a bug that rpevented to use the same port (as returned by Open_port) for several Comm_accept)
This commit was SVN r18303.
2008-04-25 20:41:44 +00:00
Tim Prins
eb94fa48ce the port name is only relevant at the root, so only look at it there.
This commit was SVN r18188.
2008-04-17 12:37:10 +00:00
Ralph Castain
7b91f8baff Cleanup and fix bugs in the MPI dynamics section. Modify the dpm API so it properly takes ports instead of process names (as correctly identified by Aurelien). Fix race conditions in the use of ompi-server. Fix incompatibilities between the mpi bindings and the dpm implemenation that could cause segfaults due to uninitialized memory.
Fix the ompi-server -h cmd line option so it actually tells you something!

Add two new testing codes to the orte/test/mpi area: accept and connect.

This commit was SVN r18176.
2008-04-16 14:27:42 +00:00
Tim Prins
313edd8955 - Fix a problem reported on the users list where we would segfault in finalize after calling spawn if the user did not call MPI_Comm_disconnect
- Fix the app context constructor so it initializes all the fields.

This commit was SVN r18079.
2008-04-04 15:07:39 +00:00
Ralph Castain
90107f3c14 Fix an issue with comm_spawn over who sent/recv first in the modex. The modex assumes that the first name on the list is the "root" that will serve as the allgather collector/distributor. The dpm was putting that entity last, which forced us to pre-inform the parent procs of the child proc's contact info since the parent was trying to send to the child.
Clarify the setting of send_first in the mpi bindings (trivial, i know, but helpful)

Remove the extra xcast of child contact info to the parent job.

This commit was SVN r17952.
2008-03-25 14:57:34 +00:00
Ralph Castain
be7d0a8a4d Fix a problem introduced by the conversion of orte_pointer_array to opal_pointer_array. We used to derive the app context's index from the returned index of the orte_pointer_array_add function - this parameter was lost in the transition to opal_pointer_array_add. As a result, we no longer knew the index of the app_context, so everything is launched with app0.
This commit was SVN r17851.
2008-03-17 23:48:10 +00:00
Ralph Castain
b110a247be Fix comm_spawn (maybe).
Comm_spawn was sticking during spawn_multiple because of a problem in the dpm - the modex there is asking processes to talk to each other in an allgather_list operation, but the procs don't have the required contact info to do so. The solution here was to ensure that all parent procs have full contact info for procs in the child job.

Admittedly, this isn't the long-term answer. We would like to have the contact info given to only the parent procs that were involved in the comm_spawn. There is a way to do that, but this will suffice to keep things working until that can be implemented and tested.

This commit was SVN r17772.
2008-03-06 21:56:00 +00:00
Tim Prins
f9916811ae Make it so we do not mangle the options the user passes to their executeable. Fixes trac:1124
The change also:
 - cleans up and simplifies the command line processing code
 - adds an error output if more than one hostfile passed for a single app context
 - gets rid of the superfluous orte_app_context_map_t type, and instead use a simple argv of -host options

This commit was SVN r17750.

The following Trac tickets were found above:
  Ticket 1124 --> https://svn.open-mpi.org/trac/ompi/ticket/1124
2008-03-05 22:12:27 +00:00
Ralph Castain
55c727cea4 Fix compiler warning
This commit was SVN r17684.
2008-03-04 15:46:37 +00:00
George Bosilca
9d421bea2a Replace all occurences of orte_pointer_array by opal_pointer_array. Remove the
implementation of orte_pointer_array.

This commit was SVN r17636.
2008-02-28 05:32:23 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00