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Граф коммитов

1256 Коммитов

Автор SHA1 Сообщение Дата
Alex Mikheev
152f77df59
ompi: pml ucx: fix datatype packing error in bsend
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
2017-03-01 16:18:19 +02:00
Yossi Itigin
33471c44ee pml_yalla/mtl_mxm/hcoll: open memory component to activate memory hooks.
Memory hooks are now set-up on demand. pml/yalla, mtl/mxm and
coll/hcoll need the memory hooks, so make sure those are installed.

Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2017-03-01 12:12:20 +02:00
Yossi
fb67c966a8 Merge pull request #2944 from alex-mikheev/topic/pml_ucx_bsend
ompi: pml ucx: add support for the buffered send
2017-02-22 12:21:03 +02:00
Alex Mikheev
b015c8bb48 ompi: pml ucx: add support for the buffered send
Signed-off-by: Alex Mikheev <alexm@mellanox.com>
2017-02-21 17:19:22 +02:00
Gilles Gouaillardet
4184c01be5 Merge pull request #2393 from bosilca/topic/no_predefined_ddt_refcount
Don't refcount the predefined datatypes.
2017-02-21 09:38:11 +09:00
Gilles Gouaillardet
ad44ecb2ba pml/base: initialize global variables
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2017-02-01 11:49:47 +09:00
Josh Hursey
5fcd69da52 Merge pull request #2831 from jjhursey/topic/ibm/pml-bsend
pml/base: Expose some bsend varaibles so PMLs may reference them
2017-01-31 10:31:42 -06:00
Yossi Itigin
13c3bf0dd7 yalla: fix memory leak with blocking non-contig send.
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2017-01-29 18:51:43 +02:00
Sameh S. Sharkawi
320ab3b84f pml/base: Expose some bsend varaibles so PMLs may reference them
Signed-off-by: Joshua Hursey <jhursey@us.ibm.com>
2017-01-25 15:21:53 -06:00
George Bosilca
c2cd717f82 Don't refcount the predefined datatypes.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2017-01-11 16:48:59 -05:00
Joshua Ladd
57c0c847d0 Merge pull request #2603 from xinzhao3/topic/revert-ucx-mt
Revert "PML/SPML/UCX: add UCX MT support to PML and SPML."
2017-01-04 11:50:37 -05:00
Ralph Castain
dadc6fbaf6 Merge pull request #2448 from thananon/remove_request_lock
Completely removed ompi_request_lock and ompi_request_cond
2017-01-03 19:31:46 -08:00
Xin Zhao
2d77912c19 Revert "PML/SPML/UCX: add UCX MT support to PML and SPML."
This reverts commit 0ecf3c951c.

Signed-off-by: Xin Zhao <xinz@mellanox.com>
2016-12-19 18:57:48 +02:00
Xin Zhao
0ecf3c951c PML/SPML/UCX: add UCX MT support to PML and SPML.
Signed-off-by: Xin Zhao <xinz@mellanox.com>
2016-12-15 23:59:15 +02:00
Yossi
fa6e263821 Merge pull request #2537 from alinask/topic/pml-spml-ucx-api
PML/SPML/UCX: Adapt to the API changes in the UCX lib.
2016-12-13 20:01:47 +02:00
KAWASHIMA Takahiro
6510800c16 ompi/request: Fix a persistent request creation bug
According to the MPI-3.1 p.52 and p.53 (cited below), a request
created by `MPI_*_INIT` but not yet started by `MPI_START` or
`MPI_STARTALL` is inactive therefore `MPI_WAIT` or its friends
must return immediately if such a request is passed.

The current implementation hangs in `MPI_WAIT` and its friends
in such case because a persistent request is initialized as
`req_complete = REQUEST_PENDING`. This commit fixes the
initialization.

Also, this commit fixes internal requests used in `MPI_PROBE`
and `MPI_IPROBE` which was marked wrongly as persistent.

MPI-3.1 p.52:

We shall use the following terminology: A null handle is a handle
with value MPI_REQUEST_NULL. A persistent request and the handle
to it are inactive if the request is not associated with any ongoing
communication (see Section 3.9). A handle is active if it is neither
null nor inactive. An empty status is a status which is set to return
tag = MPI_ANY_TAG, source = MPI_ANY_SOURCE, error = MPI_SUCCESS, and
is also internally configured so that calls to MPI_GET_COUNT,
MPI_GET_ELEMENTS, and MPI_GET_ELEMENTS_X return count = 0 and
MPI_TEST_CANCELLED returns false. We set a status variable to empty
when the value returned by it is not significant. Status is set in
this way so as to prevent errors due to accesses of stale information.

MPI-3.1 p.53:

One is allowed to call MPI_WAIT with a null or inactive request
argument. In this case the operation returns immediately with empty
status.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2016-12-08 21:42:05 +09:00
Alina Sklarevich
e9d2d029c6 PML/SPML/UCX: Adapt to the API changes in the UCX lib.
Signed-off-by: Alina Sklarevich <alinas@mellanox.com>
2016-12-08 11:33:29 +02:00
Gilles Gouaillardet
3f1486a508 pml/ob1: initialize one more field in mca_pml_ob1_recv_request_progress_rget()
always initialize recvreq->req_rdma_offset to zero.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-12-01 13:14:23 +09:00
KAWASHIMA Takahiro
9bfca8b274 pml/ob1: Reduce per-rank memory footprint slightly
`sturct mca_pml_ob1_comm_proc_t`, which is allocated per
connected rank in a communicator, had two paddings after
`expected_sequence` and `send_sequence` by alignments.
By changing the order of the members, the size of
`mca_pml_ob1_comm_proc_t` is reduced by 8 bytes on 64-bit
architectures.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2016-11-28 19:20:48 +09:00
Ralph Castain
1e2019ce2a Revert "Update to sync with OMPI master and cleanup to build"
This reverts commit cb55c88a8b.
2016-11-22 15:03:20 -08:00
Thananon Patinyasakdikul
b25a8c3fa5 Completely removed ompi_request_lock and ompi_request_cond as we dont need them anymore.
Signed-off-by: Thananon Patinyasakdikul <tpatinya@utk.edu>
2016-11-22 17:58:31 -05:00
Ralph Castain
cb55c88a8b Update to sync with OMPI master and cleanup to build
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-11-22 14:24:54 -08:00
Gilles Gouaillardet
023d18abae pml/ob1: mca_pml_ob1_recv must have memchecker mark the buffer as defined upon success
this is generally done in mca_pml_ob1_recv_request_free(), but this is not invoked
in via mca_pml_ob1_recv(), so do it manually

Thanks Yvan Fournier for the report

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-11-07 13:10:15 +09:00
Yossi Itigin
17c8f76411 pml_ucx: fix uninitialized field req_status->_cancelled.
Signed-off-by: Yossi Itigin <yosefe@mellanox.com>
2016-11-01 17:02:22 +02:00
Gilles Gouaillardet
af67183e2f pml/v: fix a memory leak
close the framework if no more component should be used

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-10-28 09:32:30 +09:00
Gilles Gouaillardet
8e788b5aee pml/ob1: refactor append_recv_req_to_queue() to improve readability
and fix a typo in a comment

Thanks George for the patch
2016-10-25 10:50:40 +09:00
Gilles Gouaillardet
4a886ac4cc pml/ob1: correctly reset receive request type before init
recvreq->req_recv.req_base.req_type should always be set before invoking
MCA_PML_OB1_RECV_REQUEST_INIT(recvreq, ...) otherwise, the previous type
might be set, and you could end up with MPC_PML_REQUEST_IMPROBE when
MCA_PML_REQUEST_RECV is expected.

Thanks Chris Pattison for the report and test case.

Fixes open-mpi/ompi#2275
2016-10-24 16:50:23 +09:00
Yossi Itigin
05ca466c6b ucx: adapt pml_ucx and spml_ucx to new UCX APIs
- pass field_mask to ucp_init().
- use non-blocking disconnect.
- recv() with pre-allocated request.
- call opal_progress() from iprobe() and improbe().
- use shift pattern in connect/disconnect.
2016-10-12 23:45:45 +03:00
George Bosilca
295eec7059 Small fix for persistence receives.
A minor optimization, few typos and extra comments
2016-09-16 10:27:32 -04:00
Nathan Hjelm
7589a25377 osc/pt2pt: do not repost receive from request callback
This commit fixes an issue that can occur if a target gets overwhelmed with
requests. This can cause osc/pt2pt to go into deep recursion with a stack
like req_complete_cb -> ompi_osc_pt2pt_callback -> start -> req_complete_cb
-> ... . At small scale this is fine as the recursion depth stays small but
at larger scale we can quickly exhaust the stack processing frag requests.
To fix the issue the request callback now simply puts the request on a
list and returns. The osc/pt2pt progress function then handles the
processing and reposting of the request.

As part of this change osc/pt2pt can now post multiple fragment receive
requests per window. This should help prevent a target from being overwhelmed.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2016-08-11 15:33:07 -06:00
Gilles Gouaillardet
dfbf2b7be4 opal/threads: add OPAL_THREAD_SUB_SIZE_T macro
-1 is not a valid size_t, so instead of OPAL_THREAD_ADD_SIZE_T(..., -1),
simply OPAL_THREAD_SUB_SIZE_T(..., 1) and keep picky compilers happy
2016-08-10 13:37:36 +09:00
Nathan Hjelm
799104f688 Merge pull request #1947 from hjelmn/perf
pml/ob1: be more selective when using rdma capable btls
2016-08-09 22:15:09 -06:00
Nathan Hjelm
4079eec974 pml/ob1: be more selective when using rdma capable btls
This commit updates the btl selection logic for the RDMA and RDMA
pipeline protocols to use a btl iff: 1) the btl is also used for eager
messages (high exclusivity), or 2) no other RDMA btl is available on
an endpoint and the pml_ob1_use_all_rdma MCA variable is true. This
fixes a performance regression with shared memory when an RDMA capable
network is available.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-08-09 20:54:42 -06:00
Nathan Hjelm
889dd32806 pml/ob1: reset req_bytes_packed on start
On start we were not correctly resetting all request fields. This was
leading to a double-completion on persistent receives. This commit
updates the base start code to reset the receive req_bytes_packed and
the send request convertor.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-08-03 11:29:30 -06:00
Joshua Ladd
06930a0423 Merge pull request #1840 from artpol84/yalla_perf_fix
pml/yalla: fix yalla performance regression
2016-07-14 10:55:30 +03:00
George Bosilca
eac5b3c668 Various cleanups in the monitoring PML. 2016-07-05 18:31:25 +02:00
Artem Polyakov
a4ff9bef6d fix #2 2016-07-05 14:38:35 +03:00
Artem Polyakov
bc973cad30 fix 2016-07-05 14:33:31 +03:00
Artem Polyakov
7d96f12fec pml/yalla: fix yalla performance regression
It was introduced in PR https://github.com/open-mpi/ompi/pull/1228
 in particular in commit 041a6a9f53.

 Original solution was using "flexible array member" called "mxm_base"
 to "fall-through" to the "mxm" send/recv member that located in the
 outer structure.

 After changing number of elements in "mxm_base" from 0 to 1 we actually
 allocating 2 mxm_req_base_t elements which leads to increased overal
 size and harms cache performance.

 It also brakes "mca_pml_yalla_check_request_state" function.
2016-07-05 10:52:48 +03:00
Nathan Hjelm
5d0b4679ea pml/ob1: bug fixes
This commit fixes two bugs in pml/ob1:

 - Do not called MCA_PML_OB1_PROGRESS_PENDING from
   mca_pml_ob1_send_request_start_copy as this may lead to a recursive
   call to mca_pml_ob1_send_request_process_pending.

 - In mca_pml_ob1_send_request_start_rdma return the rdma frag object
   if a btl fragment can not be allocated. This fixes a leak
   identified by @abouteiller and @bosilca.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-06 17:54:55 -06:00
Nathan Hjelm
e968ddfe64 start bug fixes (#1729)
* mpi/start: fix bugs in cm and ob1 start functions

There were several problems with the implementation of start in Open
MPI:

 - There are no checks whatsoever on the state of the request(s)
   provided to MPI_Start/MPI_Start_all. It is erroneous to provide an
   active request to either of these calls. Since we are already
   looping over the provided requests there is little overhead in
   verifying that the request can be started.

 - Both ob1 and cm were always throwing away the request on the
   initial call to start and start_all with a particular
   request. Subsequent calls would see that the request was
   pml_complete and reuse it. This introduced a leak as the initial
   request was never freed. Since the only pml request that can
   be mpi complete but not pml complete is a buffered send the
   code to reallocate the request has been moved. To detect that
   a request is indeed mpi complete but not pml complete isend_init
   in both cm and ob1 now marks the new request as pml complete.

 - If a new request was needed the callbacks on the original request
   were not copied over to the new request. This can cause osc/pt2pt
   to hang as the incoming message callback is never called.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>

* osc/pt2pt: add request for gc after starting a new request

Starting a new receive may cause a recursive call into the pt2pt
frag receive function. If this happens and the prior request is
on the garbage collection list it could cause problems. This commit
moves the gc insert until after the new request has been posted.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2016-06-02 20:22:40 -04:00
George Bosilca
2e1b1d34c6 Safety first ! 2016-06-02 11:52:43 +09:00
Nathan Hjelm
086ffc1838 pml/ob1: fix race on pml completion of send requests
The request code was setting the request as pml_complete before
calling MCA_PML_OB1_SEND_REQUEST_MPI_COMPLETE. This was causing
MCA_PML_OB1_SEND_REQUEST_RETURN to be called twice in some cases. The
code now mirrors the recvreq code and only sets the request as pml
complete if the request has not already been freed.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-01 13:36:06 -06:00
Thananon Patinyasakdikul
60d0fbf683 Removal of ompi_request_lock from pml/ucx. 2016-05-26 12:36:58 -04:00
George Bosilca
90f294096e Remove more references to the request mutex.
Regarding BFO it should be mentionned that this component is currently
unmaintained, and that despite my efforts I could not make it compile
(it would not compile before this patch either).
2016-05-25 23:27:06 -04:00
Nathan Hjelm
9d439664f0 pml/yalla: update for request changes
This commit brings the pml/yalla component up to date with the request
rework changes.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-25 15:42:53 -06:00
Nathan Hjelm
8445c885ce pml/cm: update for request changes
This fixes a hang caused by the request refactor work. The cm pml was
not updated and was hanging is most cases.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-25 15:35:32 -06:00
bosilca
b90c83840f Refactor the request completion (#1422)
* Remodel the request.
Added the wait sync primitive and integrate it into the PML and MTL
infrastructure. The multi-threaded requests are now significantly
less heavy and less noisy (only the threads associated with completed
requests are signaled).

* Fix the condition to release the request.
2016-05-24 18:20:51 -05:00
Aurélien Bouteiller
7f65c2b18e forgot to update copyright in commits 627a89b 4899c89 2016-05-13 11:34:59 -04:00
George Bosilca
37e03e3e5b Don't update req_bytes_received if no bytes were received. 2016-05-12 23:39:32 -04:00