ports/openmpi
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George Bosilca
b6f4bc9656 size_t not int everywhere. Correctly compute with size_t (don't initialize 
it to a negative number). Get rid of the multiplication in the critical
path, and keep the functions as simple as possible.

This commit was SVN r26864.
 2012-07-25 12:41:53 +00:00
Yael Dayan
8cad1d6481 while working on a fix for the Get flow in pml, I've encountered a problem in "mca_pml_ob1_compute_segment_length" function, at pml_ob1.h file. 
The return value from this function was truncated from size_t to int. This fix changes the return value to type size_t.

This commit was SVN r26863.
 2012-07-25 12:08:41 +00:00
George Bosilca
b0e2dc7ae3 Fix the darray issue where the UB was not computed correctly. The 
old version of the code tried to use the MPI_UB marker, but this
failed if the old marker (the one set in the cyclic function) had
a larger value. Replace the hardcore markers MPI_LB and MPI_UB by
their softer counterparts (using the _resize function).

This commit was SVN r26862.
 2012-07-24 22:24:54 +00:00
Jeff Squyres
d26a9faba5 Update svn:ignore. The vtf77 and vtf90 data files are still generated 
as sym links, even if vtfort is now the main executable.

This commit was SVN r26859.
 2012-07-24 13:49:18 +00:00
Jeff Squyres
9cb3f31b50 Odd; this compiled on OS X without needing #include "opal_stdint.h". 
Linux appears to need it.  Shrug.

This commit was SVN r26858.
 2012-07-24 13:47:24 +00:00
Jeff Squyres
6f5fd6245f Add missing %d 
This commit was SVN r26857.
 2012-07-24 13:33:11 +00:00
Jeff Squyres
0b4a659683 Stomp some compiler warnings; use proper printf sequences for uint64_t. 
This commit was SVN r26856.
 2012-07-24 13:03:55 +00:00
Jeff Squyres
e66d386441 Add a new missing field to the template BTL module that was causing a 
bunch of compiler warnings.

This commit was SVN r26855.
 2012-07-24 12:55:12 +00:00
Jeff Squyres
e5cfad0c1a This variable is only used in FT builds. 
This commit was SVN r26854.
 2012-07-24 12:48:47 +00:00
Jeff Squyres
89a4258dfc Shorten the help message, per 
http://www.open-mpi.org/community/lists/devel/2012/07/11314.php.  

This commit was SVN r26853.
 2012-07-24 12:48:12 +00:00
Mike Dubman
4784253f5c revert commit, breaks backwards compatability, will be revised 
This commit was SVN r26852.
 2012-07-24 11:48:18 +00:00
Shiqing Fan
5d81c27282 Update the CMake files for Fortran 77 bindings, get ready for F90 bindings. 
Change several variable names and update the macros.

This commit was SVN r26851.
 2012-07-24 08:49:34 +00:00
Vasily Filipov
99bd5977bd MTL MXM: small fix in the mxm_req_probe func interface. 
This commit was SVN r26850.
 2012-07-24 08:46:38 +00:00
George Bosilca
6ebbacb054 Complete the dump function for the SM BTL. Now we can see all fragments in all 
the queues as long as the BTL is dump-friendly (only SM right now).

This commit was SVN r26849.
 2012-07-24 00:22:22 +00:00
George Bosilca
55bc3c4763 Fix the copyright. 
This commit was SVN r26848.
 2012-07-24 00:20:24 +00:00
George Bosilca
1ad6c82015 Implement the dump function for the PML OB1. 
This commit was SVN r26847.
 2012-07-24 00:19:18 +00:00
Samuel Gutierrez
76d94bf9bf Plug leak. Thanks, Nathan. 
This commit was SVN r26846.
 2012-07-23 21:11:21 +00:00
Samuel Gutierrez
8096852a16 Towards RML-less shared-memory initialization (primarily for eventual BTL 
move).  Extended common sm API with: mca_common_sm_module_create and
mca_common_sm_module_attach. Please note that the new routines aren't currently
used -- but will be...

This commit was SVN r26845.
 2012-07-23 19:38:13 +00:00
Matthias Jurenz
e5614013cf Changes to VT: 
- configure:
		- added option --with[out]-liberty to enable/disable symbol demangling with libiberty; default: disabled, because many systems don't provide a PIC version of libiberty
		- fixed compiler flags for building Fortran MPI wrapper library

This commit was SVN r26839.
 2012-07-23 13:21:19 +00:00
Matthias Jurenz
45dfa0d0b1 Changes to VT: 
- added CUDA stream reuse for both, CUDA tracing with CUPTI and CUDART wrapper
	- removed CUDA stream number from thread name, when CUDA stream reuse is enabled
	- disable tracking of MPI communicators, requests, windows, etc. if MPI is initialized with MPI_THREAD_SERIALIZED or MPI_THREAD_MULTIPLE (only MPI function enter/leave events will be recorded)
	- configure:
		- fixed detection of compiler instrumentation type on Cray platforms using the cc compiler wrapper
	- compiler wrappers:
		- fixed preprocessing source files to be parsed by OPARI (add path to empty omp.h to the preprocessor flags to avoid multiple declarations of OpenMP functions, types, etc.)
		- vtnvcc: Remove 'compinst' instrumentation type, if VT is configured with a non-GNU compiler instrumentation support (Fixed "unrecognized option" error)
	- vtdyn:
		- added support for instrumenting outer- and inner loops and its iterations (outer=loops within a function, inner=loops within outer loops)
		- try to get the full prototype of functions to be instrumented
		- consider default filter rules also if no filter file is given
		- fixed potential segfault if adding a filter rule w/o stack bounds
		- print verbose messages on stdout if vtdyn is started from the Dyninst attach library (libvt-dynatt)
	- vtunify:
		- print verbose messages on stderr if vtunify is started automatically from the VT library

This commit was SVN r26836.
 2012-07-23 10:15:22 +00:00
Shiqing Fan
8c4a3e1269 correct the symbol dllexports for windows build 
This commit was SVN r26827.
 2012-07-22 08:54:50 +00:00
Shiqing Fan
fe9857adaa remove files that are not necessary for hwloc windows build. 
This commit was SVN r26826.
 2012-07-21 22:44:58 +00:00
Jeff Squyres
11feeb61f3 Clarify the comment: we ''do'' apply the memory policy before main() 
starts... unless you direct launch MPI applications, in which case the
policy isn't in effect until MPI_INIT completes.

This commit was SVN r26823.
 2012-07-20 22:46:34 +00:00
Shiqing Fan
12d99a9ebb Update the hwloc build on Windows and related files. 
This commit was SVN r26818.
 2012-07-20 12:14:28 +00:00
Shiqing Fan
4bbddf6875 Fix another typecast 
This commit was SVN r26817.
 2012-07-20 12:11:47 +00:00
Shiqing Fan
0f6184985d correct a few typecasts 
This commit was SVN r26816.
 2012-07-20 12:10:00 +00:00
Eugene Loh
10e3dc396b Add a missing return value. 
This commit was SVN r26815.
 2012-07-20 01:32:06 +00:00
Brian Barrett
2518014037 Fix a number of issues with IN_PLACE 
This commit was SVN r26814.
 2012-07-19 21:29:43 +00:00
Brian Barrett
c6cf561a17 remove unneeded rank 
This commit was SVN r26813.
 2012-07-19 21:29:18 +00:00
Brian Barrett
7f2296eb39 need count for memcheck... 
This commit was SVN r26812.
 2012-07-19 21:28:47 +00:00
Nathan Hjelm
cd2cbdca09 btl/openib: limit each process to a ppn fraction of the available registered memory when using mellanox hardware (mlx4 and mthca). fixed 
This commit was SVN r26811.
 2012-07-19 17:52:21 +00:00
Ralph Castain
66fe57f746 Revert r26804 so openib can build again 
This commit was SVN r26810.

The following SVN revision numbers were found above:
  r26804 --> open-mpi/ompi@610be870f9
 2012-07-19 16:16:38 +00:00
Ralph Castain
071c5fc85c Silence warnings 
This commit was SVN r26809.
 2012-07-19 14:29:47 +00:00
Ralph Castain
44bd855717 Silence warnings 
This commit was SVN r26808.
 2012-07-19 14:29:32 +00:00
Vasily Filipov
597a422272 MTL: make MXM work with read (in blocking send case) call-backs. 
This commit was SVN r26807.
 2012-07-19 13:28:06 +00:00
George Bosilca
0db06c57a1 Remove the duplicated prototype of PMPI_Reduce_scatter. 
This commit was SVN r26806.
 2012-07-19 13:12:42 +00:00
Ralph Castain
f3c312310d Revert r26801 so the trunk can build again 
This commit was SVN r26805.

The following SVN revision numbers were found above:
  r26801 --> open-mpi/ompi@8f0525a8cc
 2012-07-19 12:29:22 +00:00
Nathan Hjelm
610be870f9 btl/openib: limit each process to a ppn fraction of the available registered memory when using mellanox hardware (mlx4 and mthca) 
This commit was SVN r26804.
 2012-07-18 17:29:48 +00:00
Nathan Hjelm
4a97ecbdd2 btl/openib: remove tab characters 
This commit was SVN r26803.
 2012-07-18 17:29:37 +00:00
Eugene Loh
a3e02fdaff With non-blocking collectives, a "round schedule" could fall on any address 
alignment, which typically causes problems on SPARC.  Further, the pointer
manipulation to access elements in a round schedule was clumsy.  This change
introduces macros to facilitate addressing and make it more portable.

This commit was SVN r26802.
 2012-07-18 17:08:24 +00:00
George Bosilca
8f0525a8cc Fix the non-blocking collective prototypes. 
This commit was SVN r26801.
 2012-07-18 14:23:23 +00:00
Nathan Hjelm
771b427027 udcm: unmonitor the fd BEFORE tearing down the listen qp 
This commit was SVN r26800.
 2012-07-18 14:22:45 +00:00
Nathan Hjelm
3102f4fb86 removed the elan directory (missed in r26798) 
This commit was SVN r26799.

The following SVN revision numbers were found above:
  r26798 --> open-mpi/ompi@35de50b823
 2012-07-17 15:15:08 +00:00
Nathan Hjelm
35de50b823 remove the elan btl 
This commit was SVN r26798.
 2012-07-17 14:51:41 +00:00
Nathan Hjelm
fc1b295606 udcm: evict from the lru of the openib device's grdma mpool if a qp can not be created. Note: there doesn't appear to be a standard way to differentiate between ibv_create_qp failing because the node is out of registered memory and failing because no more qps are available 
This commit was SVN r26797.
 2012-07-14 01:58:29 +00:00
Nathan Hjelm
3798f38386 do not print out an error message if ibv_reg_mr fails 
This commit was SVN r26796.
 2012-07-14 01:35:45 +00:00
Abhishek Kulkarni
1ce378b5c6 Make C/R work with nodes > 1. This fix makes sure that the app coordinators send 
the "ready-to-checkpoint" signal to the global coordinator only after ORTE has
initialized.

This commit was SVN r26795.
 2012-07-13 23:37:29 +00:00
Abhishek Kulkarni
1878f276cd Replace the pattern while(flag) { opal_progress() }; in the C/R code 
with the ORTE_WAIT_FOR_COMPLETION macro.

This commit was SVN r26794.
 2012-07-13 23:31:56 +00:00
Nathan Hjelm
4d1920ee87 Fix a bug on 32-bit systems introduced by r26626. This fix ensures that all supported btls (with exception of wv-- shiqing will need to help bring that one up to date with r26626) set the lval in prepare_src/dst when preparing a put or get segment. This fix also ensures a consistent use of lval in put and get for both local and remote segments. 
This commit was SVN r26793.

The following SVN revision numbers were found above:
  r26626 --> open-mpi/ompi@249066e06d
 2012-07-13 21:19:16 +00:00
Jeff Squyres
e1ced2320a Make dist tarballs accept no lower than AM 1.12.2 
This commit was SVN r26791.
 2012-07-13 15:40:35 +00:00