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Граф коммитов

232 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
dbfab94ede atomic/mxm: rename symbol that is a duplicate of one in atomic/ucx
This fixes an error when building with --enable-static.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-05-25 15:34:40 -06:00
Jeff Squyres
2c5b39718d oshmem: fix scoll_null_alltoall() prototype
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-03-26 03:50:57 -07:00
Mike Dubman
1d8fbfefb0 Merge pull request #1478 from igor-ivanov/pr/oshmem-v1.3-alltoall
oshmem: Add alltoall
2016-03-22 07:51:36 +02:00
Mike Dubman
7483a66ef6 Merge pull request #1455 from igor-ivanov/pr/oshmem-v1.3
oshmem: Add Non-blocking Remote Memory Access Routines
2016-03-22 07:50:11 +02:00
Igor Ivanov
1bed5d8aee oshmem: Align OSHMEM API with spec v1.3 (update scoll/basic) 2016-03-21 11:46:01 +02:00
Igor Ivanov
50906b34b3 oshmem: Align OSHMEM API with spec v1.3 (Add scoll/alltoall interface) 2016-03-21 10:43:31 +02:00
Igor Ivanov
e690521cdd oshmem/scoll: Fix bug in basic/barrier algorithm 2016-03-21 10:34:55 +02:00
Igor Ivanov
36c29b393b oshmem: Align OSHMEM API with spec v1.3 (update spml/yoda) 2016-03-17 19:06:39 +02:00
Igor Ivanov
b2700320a3 oshmem: Align OSHMEM API with spec v1.3 (update spml/ikrit) 2016-03-17 19:06:39 +02:00
Igor Ivanov
450ea6684c oshmem: Align OSHMEM API with spec v1.3 (update spml/ucx) 2016-03-17 19:06:38 +02:00
Igor Ivanov
8464b6147a oshmem: Align OSHMEM API with spec v1.3 (Add spml/get_nb interface) 2016-03-15 14:04:59 +02:00
George Bosilca
68c36ea9dc Fix two annoying warnings in our UCX support. 2016-02-14 00:02:16 -05:00
Alex Mikheev
f627608e42 OSHMEM/UCX: implements atomic support
ucx atomic component has a real code now.
fixes bug in spml ucx arr_procs
removes redundant parameter checks from atomic components.
2016-01-21 16:02:28 +02:00
Gilles Gouaillardet
fec973efda configury: test portability
replace test ... -o ... with test ... || test ...
and test ... -a ... with test ... && test ...
2015-12-28 13:58:45 +09:00
Gilles Gouaillardet
99d046d060 scoll/fca: add missing #include <alloca.h> 2015-12-24 14:33:58 +09:00
igor.ivanov@itseez.com
08c18195e7 oshmem/sshmem: Fix warnings in verbs component 2015-12-16 17:37:00 +02:00
igor.ivanov@itseez.com
6448bd07a4 oshmem/spml: Fix warnings in ikrit component 2015-12-16 17:36:54 +02:00
Igor Ivanov
5c061abf4e oshmem: Fix scan coverity issues
1324740 - Resource leak
1304562 - Unchecked return value
1340514 - Dereference before null check
1340515 - Use of untrusted scalar value
1340516 - Use of untrusted string value
2015-12-02 12:49:19 +02:00
Igor Ivanov
05d947d55a oshmem: Align OSHMEM API with spec v1.2 (support environment variables) 2015-11-24 18:57:56 +02:00
Mike Dubman
3e93ef49da Merge pull request #1134 from alex-mikheev/topic/ikrit_err_fix_fix
SPML/IKRIT: opal_progress and ud_only fixes
2015-11-15 19:20:55 -06:00
Mike Dubman
a7128af8c4 OSHMEM/ikrit: fix valgrind error 2015-11-15 14:51:41 +02:00
Alex Mikheev
0755a59091 SPML/IKRIT: opal_progress and ud_only fixes
Some MXM tls such as self, shm can comlete requests immediately.
Make sure that opal_progress() is called before before request
is completed.

fix ud_only logic when hw rdma channel is using ud and main
transport is rc or dc.
2015-11-15 12:13:24 +02:00
Mike Dubman
8ec5c99412 Merge pull request #1126 from alex-mikheev/topic/ikrit_err_fix
Topic/ikrit err fix
2015-11-11 15:31:06 +02:00
Alex Mikheev
cd8ea438d3 OSHMEM/SPML/ikrit: memcheck support 2015-11-11 13:46:20 +02:00
Alex Mikheev
2a8de45b43 OSHMEM/SPML/IKRIT: check return of mxm_req_send correctly
do not force memory registration if main and additional comm
channels are both ud
2015-11-11 13:34:26 +02:00
Igor Ivanov
c0518c0417 oshmem: Enable force output for error messages
This change fixes issue when oshmem related error messages are not
visible for an user.
2015-11-11 13:26:10 +02:00
Alex Mikheev
b269dd59e3 OSHMEM/SPML/UCX: fixes typo in add_procs 2015-11-02 16:48:26 +02:00
Ralph Castain
e1778f5f9b Revert " changing the destruct function of list release API to release list items"
This reverts commit 720fa860ee.
2015-10-27 15:24:45 -07:00
rhc54
0bc51375f3 Merge pull request #1004 from rppendya/rppendya_list_release
Releasing the list items when list destructor is called
2015-10-21 14:34:19 -07:00
yosefe
cc76db8d39 ucx: reduce components priority to 5. 2015-10-21 17:38:25 +03:00
Raghavendra Pendyala
720fa860ee changing the destruct function of list release API to release list items
caused a bug in oshmem application. Fixing the bug with this patch
2015-10-20 12:58:23 -07:00
Alex Mikheev
f2b501a862 oshmem: Add UCX spml. 2015-10-20 19:46:02 +03:00
Alex Mikheev
b020b628fc oshmem/memheap: optimized mkey lookup.
Fast path lookup is done in inline funcion.
2015-10-20 19:45:51 +03:00
yosefe
bd3f4c8cc7 spml/memheap: add support for mkey unpack. 2015-10-20 19:45:50 +03:00
Alex Mikheev
8fa14386ea spml_ikrit: fixes typo in .h file. 2015-10-20 19:36:41 +03:00
Gilles Gouaillardet
291a464efb configury: remove the --enable-mpi-profiling option
and directly call the PMPI_* symbols from C and Fortran bindings
2015-10-13 08:52:35 +09:00
Gilles Gouaillardet
53b952dc2b oshmem: invoke the C PMPI_* subroutines instead of the MPI_* ones
when profiling is built.
This prevents oshmem subroutines from being wrapped twice by third
party tools (e.g. once in oshmem and once in MPI)
see discussion starting at http://www.open-mpi.org/community/lists/devel/2015/08/17842.php

Thanks to Bert Wesarg for bringing this to our attention
2015-10-13 08:52:03 +09:00
Igor Ivanov
7de0537a1d oshmem: Add help message for fatal issues in scoll:mpi and scoll:fca
Signed-off-by: Igor Ivanov <Igor.Ivanov@itseez.com>
2015-09-21 18:50:20 +03:00
Igor Ivanov
ec7cd13a81 oshmem: Fix compilation warnings 2015-09-21 18:50:20 +03:00
Igor Ivanov
ca8c3eebea oshmem: Abort application in casesingle scoll:mpi is selected
scoll:mpi does not have barrier and should be selected with
any other scoll component.

Signed-off-by: Igor Ivanov <Igor.Ivanov@itseez.com>
2015-09-21 10:42:54 +03:00
Igor Ivanov
f437f4012e Revert "scoll/mpi: work around bug in oshmem/proc design"
This workaround is needless after oshmem/proc refactoring

This reverts commit 202c6a38e4.
2015-09-17 19:01:24 +03:00
Igor Ivanov
4b8d9b8eff oshmem/proc: Refactor proc component
Most functionality of oshmem_proc duplicates ompi_proc. In addition
to that, Current logic does not allow to do oshmem initialization
w/o ompi startup.
So this refactoring allows to  avoid code duplication, decrease used
memory and make oshmem support easier.
Now oshmem_proc is transparent ompi_proc structure, that can be
extended by oshmem specific data.

Signed-off-by: Igor Ivanov <Igor.Ivanov@itseez.com>
2015-09-17 18:49:00 +03:00
Nathan Hjelm
69b9bc2269 oshmem/memheap: correct usage of opal_dss functions
Any buffer given to opal_dss.load becomes the responsibility of the
opal_buffer_t object. It will be freed automatically if either the
opal_buffer_t is released or opal_dss.load is called again on the
buffer. opal_dss.unload will not prevent this unless no unpacking
takes place between the .load and .unload calls.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-09-14 13:54:56 -06:00
Gilles Gouaillardet
8f2d3aeb65 oshmem: do not include pml/ob1 headers
this is an abstraction violation and that can cause linker failure
2015-09-11 09:34:10 +09:00
Nathan Hjelm
202c6a38e4 scoll/mpi: work around bug in oshmem/proc design
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-09-10 08:55:56 -06:00
Ralph Castain
cf6137b530 Integrate PMIx 1.0 with OMPI.
Bring Slurm PMI-1 component online
Bring the s2 component online

Little cleanup - let the various PMIx modules set the process name during init, and then just raise it up to the ORTE level. Required as the different PMI environments all pass the jobid in different ways.

Bring the OMPI pubsub/pmi component online

Get comm_spawn working again

Ensure we always provide a cpuset, even if it is NULL

pmix/cray: adjust cray pmix component for pmix

Make changes so cray pmix can work within the integrated
ompi/pmix framework.

Bring singletons back online. Implement the comm_spawn operation using pmix - not tested yet

Cleanup comm_spawn - procs now starting, error in connect_accept

Complete integration
2015-08-29 16:04:10 -07:00
Gilles Gouaillardet
1a238d3a4f configury: fix fca detection
* do not add -I/.../include/fca -I /.../include/fca_core to CPPFLAGS
 * allow configure --with-fca
 * search fca libs in both DIR/lib and DIR/lib64
 * fix the description of the --with-fca option
2015-08-13 11:09:15 +09:00
Jeff Squyres
5065978a1e oshmem: __FUNCTION__ -> __func__ fixes 2015-08-05 05:39:38 -07:00
yosefe
41f3b77e31 ikrit: set DC defaults. 2015-07-24 21:01:13 +03:00
Nathan Hjelm
4d92c9989e more c99 updates
This commit does two things. It removes checks for C99 required
headers (stdlib.h, string.h, signal.h, etc). Additionally it removes
definitions for required C99 types (intptr_t, int64_t, int32_t, etc).

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-25 10:14:13 -06:00