number of recv system call by caching the data. Each endpoint has a buffer
(the size is an MCA parameter) that can be use as a cache. Before each receive
operation this buffer is added at the end of the iovec list. All data that are
not expected by the fragment will go in this cache. If the cache contain data
all subsequent receive will just memcpy the data into the BTL buffers.
The only drawback is that we will spin around the receive_handle until all the
cached data is readed by the PML layer. This limitation come from the fact that
the event library is unable to call us if there is no events on the socket.
Therefore we are unable to keep the data in the cache until the next loop
into the progress engine.
This commit was SVN r8398.
increase the previous connection code was broken. It can take as much as 60 seconds to connect
64 processes. Now we do not create the connections when we add the procs but only when we send
them the first message. Now it take only 1.6 seconds to setup a 64 procs MPI job over MX (doing a 2 steps barrier in order to insure that we create all the connections).
This commit was SVN r8252.
* turns out (duh!) that there was a reason that the <projectdir>dir
variable was set in the AM conditional. If not, stupid directories
are created and not needed... duh.
This commit was SVN r8205.
component/base Makefile.am files, reducing the time configure spends
stamping out Makefiles at the end
* Install base_impl.h file when devel-headers are being installed
This commit was SVN r8200.
is labeled as internal so the users will not see it but it is not read-only so we can still
play with it (that's for our internal tests). This is supposed to dissapear later after the
next (or next next) release of the MX library, but we need it now as a quick fix before the
release.
This commit was SVN r8161.
- Add big comment about a general overview of what the sm btl is doing
- random small code cleanups
- fix instances of mca_btl_sm[0] to mca_btl_sm[1] where relevant
- remove a lot of unused, confusing, and incorrect interface functions
from ompi_fifo.h and ompi_circular_buffer.h. These functions, if
they were used, would not work properly with the scheme that the sm
btl uses with the fifos (i.e., receiver makes right -- if necessary)
- add some missing offset computations in the fifo and circular buffers
- change the types of offsets to be ssize_t, not size_t
- remove an offset parameter from a function that didn't need it
This commit was SVN r8135.
- Ensure to convert base_shared_mem_flags to be a relative offset in
the global storage, and then to convert that back to an absolute
virtual address before we try to use it
- Don't double increment n_local_procs when calculating the peer rank
during bootstrapping of the different base address case
Something else is still wrong; if mmap() returns a different base
address, things don't work (i.e., segv or hang forever when you try to
send a message). More specifically, the bootstrapping now seems to
correctly handle the case when mmap() base addresses are different,
but the message passing does *not* -- it always assumes that the
mmap() base addresses are the same.
Still working on the fix for that -- want to checkpoint what has been
done so far to facilitate working on different machines...
This commit was SVN r8134.
- first we setup the connections in the begining with all the peers
- MX does not handle well the case where several peers make connections to the same
destination simultaneously.
So I change the order in which we connect. First we compute our rank in the array,
then in a round-robin fashion we setup connection starting with our left neighboard.
This commit was SVN r8075.
larger than 32K for inter-nodes transfert ... and then they do not support iovecs larger than
16K for inter-node transfert. Therefore we have to set the size of our first fragment to
16K to match both cases.
This commit was SVN r7926.
to be supported by mellanox vapi.. perhaps this will be supported in the near
future, for now it doesn't hurt to have it in the trunk
Also cleanup the receive descriptor posting macro's..
This commit was SVN r7903.
Note, we are failing the ring tests in the intel p2p test suite, but we seem
to fail the same tests under the current trunk.. will look into this further.
This commit was SVN r7823.
memory initialization, call opal_progress() to push any pending events
around and possibly yield the processor if nothing entertaining is happening.
This should probably go to the 1.0 branch.
This commit was SVN r7808.
originally suggested by Ralf Wildenhues, to try to speed autogen, configure,
and make (and possibly even make install). Use automake's include directive
to drastically reduce the number of Makefile files (although the number of
Makefile.am files is the same - most are just included in a top-level
Makefile.am). Also use an Automake SUBDIRs feature to eliminate the
dynamic-mca tree, which was no longer really needed. This makes adding
a framework easier (since you don't have to remember the dynamic-mca
tree) and makes building faster (as make doesn't have to recurse through
the dynamic-mca tree)
This commit was SVN r7777.
on others as an char*. Thus the right side of all assignment should be explicitly casted to an void* in
order to avoid any casting complaints from the compilers.
This commit was SVN r7607.
On thor, if IB is down, we get NULL back from ibv_get_devices(), which then
caused segfaults in dlist_start().
* Pretty-print error message if no HCAs found
This commit was SVN r7557.
any NICs to use
* Make mvapi, gm, and mx components all publish information, even if there
are no NICs available so that modex_recv doesn't hang. If there are no
NICs available, don't set the reachable bit, but don't do anything
to fail. This unfortunately doesn't cover the hangs that will result if
different procs load different sets of components, but it's a start
This commit was SVN r7550.
Try to detect which form this version of Open IB uses, defaulting to the 5
version if we can't figure it out (the new version has 5 params)
* Only add -lcm if it exists on the system - some versions of Open IB
apparently don't need it.
This commit was SVN r7542.
searching the tree. Modified the memory callback to search the tree at each
page boundary for registrations. This is necessary as an application may
malloc memory and send out of any portion of that memory, even discontiguous
regions.
This commit was SVN r7510.
add misc asserts to check for proper reference counting.
ugly hack 1 -- use mallopt to never release memory ala sbrk - this is
commented out in mca_btl_mvapi_component_init
ugly hack 2 -- test registrations comming out of the tree via rcache_find, for
an unknown reason the tree is returning registrations where the address is not
within the base or bound of the registration. If this happens, we return
NULL.
comment out code to enable mem hooks if leave_pinned is set, note we can do
this via an mca param and will default it to leave_pinned with mem_hooks when
we iron out these issues.
I am adding a unit test for the rcache. Note that we have a unit test for the
rb tree but the compare function is significantly different than that used for
registrations. After we have tracked down the issues with rcache_rb we will
remove the above hacks.
This commit was SVN r7499.
Red Storm is complaining about invalid memory pointer (need to go back
to Linux and look at this with valgrind)
* Turn off send in place for now, so I can run the tests on RS and see if
everything else is ok
This commit was SVN r7497.
* fix dumb bug in btl_portals_get where I using the dest descriptor key instead
of the source descriptor key for the match bits, resulting in a PtlGet() with
the wrong match bits
This commit was SVN r7496.
Correct the spring of the vpid problem (similar to the one in the SM PTL).
Add one more argument to the MCA_BTL_SM_FIFO_WRITE macro who will get passed down to the
MCA_BTL_SM_SIGNAL_PEER macro to allow it to have the fifo_fd file descriptor.
This commit was SVN r7305.
a constructor, like the rest of the code base
- Convert usage in the tree to use the constructor to zero out an
instance of opal_output_stream_t
- Still need to re-enable output files
This commit was SVN r7253.
AM_INIT_AUTOMAKE, instead of the deprecated version.
* Work around dumbness in modern AC_INIT that requires the version
number to be set at autoconf time (instead of at configure time, as
it was before). Set the version number, minus the subversion r number,
at autoconf time. Override the internal variables to include the r
number (if needed) at configure time. Basically, the right thing
should always happen. The only place it might not is the version
reported as part of configure --help will not have an r number.
* Since AM_INIT_AUTOMAKE taks a list of options, no need to specify
them in all the Makefile.am files.
* Addes support for subdir-objects, meaning that object files are put
in the directory containing source files, even if the Makefile.am is
in another directory. This should start making it feasible to
reduce the number of Makefile.am files we have in the tree, which
will greatly reduce the time to run autogen and configure.
This commit was SVN r7211.
this assumes that the peers have all been added via add_procs up front.
Bad things will happen if add_procs is called again later on a new set of
procs to fix this we need to modify the srq which may wreck things.. looking
into this deeper..
This commit was SVN r7142.
add a -I to find the included ltdl.h (vs. a system-installed ltdl.h)
- Clean up kruft in a bunch of Makefile.am's to remove now-unnecessary
AM_CPPFLAGS settings to get static-components.h for each framework
- Move the component_repository API functions out of opal/mca/base/base.h
and into opal/mca/base/mca_base_component_repository.h in order to
decrease unnecessary dependencies (e.g., before this, almost
everything in the tree depended on ltdl.h, which is unnecessary --
only a small number of files really need ltdl.h)
This commit was SVN r7127.
issue so PUT is default.. We are determining if this is an openib issue or a
btl issue as we have seen performance increases on mvapi.
This commit was SVN r6928.
alignment of 0, then assume there will be no data segment and don't do
the checks to see if it will be beyond the end of the file.
This commit was SVN r6773.
The following SVN revision numbers were found above:
r6672 --> open-mpi/ompi@8b56769307
- Adjust btl sm to allocate just a few bytes extra to allow the common
sm component to assume that there will be a data segment (even though
the sm btl doesn't use the data segment in that portion of code)
This commit was SVN r6772.
* Major rework of Portals to better match Red Storm and hopefully get
better performance:
- Always assume there is only one module (since there are no machines
on the planet with more than one Portals interface)
- make progress all one function rather than dispatching to other
functions and dispatch on event type, not comm type
- remove polling of unneeded events
This commit was SVN r6769.
Change all the places where they are used to fit the new name.
Remove the code to check the remote arch from the PML. We will have a GPR mechanism
in ompi_mpi_initialize to do that.
This commit was SVN r6750.
the message is no longer pending
* Try to push out new messages whenever we finish a send, whether it
worked or not. Means that in the case where the other side has too
many sends pending, we'll constantly retry one (and only one, once the
pending number is reached) message until goodness returns
* Make some warnings only happen in verbose case, as they are mainly
diagnostics
This commit was SVN r6732.
may appear.
(remove *error.h file from Makefile.am -- a cut-n-paste error that has
propagated to a surprising number of directories ;-) )
This commit was SVN r6721.
* add btl back into ompi_info. Since it now directly calls the
open/close, the missing symbol problems Ralph was seeing when ob1 is
ignored will not occur.
This commit was SVN r6652.
support in OMPI. Currently only enables/disables the architecture
sharing modex in ob1 pml.
* Add sds framework to ompi_info
* Figure out table ids to use for Portals BTL at configure time, since
we should use 30 & 31 on Red Storm, but the reference implementation
only supports 0-8.
* Some bug fixes in Portals UTCP sds
This commit was SVN r6650.
- only call sched_yield if it exists
- don't fail out if modex doens't work in ob1
- bunch of fixes for Portals BTL
- add cnos rml component
- add NULL gpr component (should only be used if replica AND proxy
fail to load)
This commit was SVN r6629.
* remove the recv fragment code, since it really isn't needed
* handle memory descriptor binding a bit more sanely, and use
thresholds so that Portals does the unlink for us, when it feels
like it.
This commit was SVN r6575.
* change all the opal_output_verbose calls in the critical path to
OPAL_OUTPUT_VERBOSE so that they are pre-processed out if debugging
is not enabled
* remove stub code
This commit was SVN r6564.
"run-time" api for the reference implementation.
* Make the non-modex utcp and redstorm compat code do the same things in
the same order
This commit was SVN r6556.
associated with the descriptor is ours again once the callback function
returns. Make it so - probably can optimize out some of the stuff I
did when I mistakenly thought the descriptor free() was called on the
passed descriptor
* Fix some dumb accounting errors with MD usage for unexpected receives
This commit was SVN r6555.
Fixed receive descriptor counts that limited mvapi and openib to 2 procs.
Begin porting error messages to use the BTL_ERROR macro.
This commit was SVN r6554.
multiple components to share a single mpool module (e.g., the
ptl/btl and coll sm components).
- Re-tool the ptl, btl, and coll sm components to first look for the
target mpool module, and if they don't find it, to create it.
- coll sm component now correctly identifies when it is supposed to
run or not (i.e., if all the processes in the communicator are on
the same host). Now we just need to fill in some algorithms. :-)
This commit was SVN r6530.
corrected free and realloc in mpool. Added alloc_base to
mca_mpool_base_registration_t to be used as the actual alloc'd base address,
which may be different from the reported base address due to page allignment.
This commit was SVN r6524.
IBM tests, but see same segfaults / assets in sm btl.
* Add prepare_src implementation so that we can send multiple fragments of
large messages
* Add queuing of sends if either there are too many outstanding sends
(we have to limit this so that we don't have more sends pending than
we could get acks for) or if we get an ack with a 0 byte mlength,
which means the remote side dropped the message on us.
Still need to valgrind to make sure I'm not leaking resources
This commit was SVN r6508.
Red Storm. Add stub functions to ompi_config_bottom.h when they are
around
* Add protection for a bunch of #include <netinet/in.h>s
* Fix up the Portals BTL so that it compiles on Red Storm and has the
right mojo for initialization on Red Storm
* Add some important comments to ompi_check_package and mvapi configures
* Add support for platforms without getpwuid() (aka, Red Storm).
This commit was SVN r6478.
sockaddr_in - seems to be a good indicator)
* disable util/if code if no inet devices (again, no sockaddr_in)
* add enable/disable flag to disable stacktrace pretty-print code
(defaults to enabled). Seems there's something funky going on with
the preprocessor on Red Storm that was causing problems - this was
the easiest fix
* clean up a bunch of the configure.m4 files to remove bogus comments,
properly comment them, fix the dumb logic for happy/unhappy
* Create a macro for testing both header and library for a package,
since we seem to do this kind of test quite often. Handles the
-I and -L search paths properly (including stripping out /usr and
/usr/local if not needed)
* Converted mvapi components to configure.m4, using the nice new
ompi_check_package macro (above)
This commit was SVN r6454.
threads (basically, same as before, but we now link the right thread
libraries).
* Add disable-io-romio flag to disable compiling ROMIO
* Migrathe mvapi btl from configure.stub to configure.m4
This commit was SVN r6453.
appropriate spot and also added a check for the libsysfs library required by openmpi. Modified the mvapi configure.stub to use AC_TRY_LINK for
pthreads.
This commit was SVN r6441.
components to succeed with --enable-dist. Instead, just add them to
all_components and make dist will still work - we're going to stamp out
the Makefiles no matter what
* Add missing header to ob1 pml for make dist
* Clean up the Portals BTL configure code
This commit was SVN r6413.
frameworks, and components without configure scripts instead of
hard-coded shell variables (for projects and frameworks) and
shell variable building (for components).
* Add 3rd category of component configuration (in addition to configure
scripts and no-configured components): configure.m4 components. These
components can only be built as part of OMPI (like no-configure), but
can provide an m4 file that is run as part of the main configure
script. These macros can set whether the component should be built,
along with just about any other configuration wanted. More care must
be taken compared to configure components, as doing things like setting
variables or calling AC_MSG_ERROR now affects the top-level configure
script (so calling AC_MSG_ERROR if your component can't configure
probably isn't what you want)
* Added support to autogen.sh for the configure.m4-style components,
as well as building up the m4_define lists ompi_mca.m4 now expects
* Updated a number of macros to be more config.cache friendly (both
so that config.cache can be used and so the test can be quickly
run multiple times in the same configrue script):
- ompi_config_asm
- c_weak_symbols
- c_get_alignment
* Added new macros to be shared when configuring components:
- ompi_objc.m4 (this actually provides AC_PROG_OBJC - don't ask...)
- ompi_check_xgrid
- ompi_check_tm
- ompi_check_bproc
* Updated a number of components to use configure.m4 instead of
configure.stub
- btl portals
- io romio
- tm ras and pls
- bjs, lsf_bproc ras and bproc_seed pls
- xgrid ras and pls
- null iof (used by tm)
This commit was SVN r6412.
- After long discussions and ruminations on how we run components in
LAM/MPI, made the decision that, by default, all components included
in Open MPI will use the version number of their parent project
(i.e., OMPI or ORTE). They are certaint free to use a different
number, but this simplification makes the common cases easy:
- components are only released when the parent project is released
- it is easy (trivial?) to distinguish which version component goes
with with version of the parent project
- removed all autogen/configure code for templating the version .h
file in components
- made all ORTE components use ORTE_*_VERSION for version numbers
- made all OMPI components use OMPI_*_VERSION for version numbers
- removed all VERSION files from components
- configure now displays OPAL, ORTE, and OMPI version numbers
- ditto for ompi_info
- right now, faking it -- OPAL and ORTE and OMPI will always have the
same version number (i.e., they all come from the same top-level
VERSION file). But this paves the way for the Great Configure
Reorganization, where, among other things, each project will have
its own version number.
So all in all, we went from a boatload of version numbers to
[effectively] three. That's pretty good. :-)
This commit was SVN r6344.
* rename ompi_malloc to opal_malloc
* rename ompi_numtostr to opal_numtostr
* start of rename of ompi_environ to opal_environ
This commit was SVN r6332.
* rename ompi_basename to opal_basename
* rename ompi bitop functions to opal
* rename ompi_cmd_line to opal_cmd_line
* rename ompi_sizet2int to opal_sizet2int
* rename orte_daemon_init to opal_daemon_init
* rename ompi_few to opal_few
This commit was SVN r6330.
