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Rainer Keller
d81443cc5a - On the way to get the BTLs split out and lessen dependency on orte:
Often, orte/util/show_help.h is included, although no functionality
   is required -- instead, most often opal_output.h, or               
   orte/mca/rml/rml_types.h                                           
   Please see orte_show_help_replacement.sh commited next.            

 - Local compilation (Linux/x86_64) w/ -Wimplicit-function-declaration
   actually showed two *missing* #include "orte/util/show_help.h"     
   in orte/mca/odls/base/odls_base_default_fns.c and                  
   in orte/tools/orte-top/orte-top.c                                  
   Manually added these.                                              

   Let's have MTT the last word.

This commit was SVN r20557.
2009-02-14 02:26:12 +00:00
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Josh Hursey
9971bc9d95 Merge in the mca_base_select changes per RFC:
http://www.open-mpi.org/community/lists/devel/2008/04/3779.php

{{{
svn merge -r 18276:18380 https://svn.open-mpi.org/svn/ompi/tmp-public/jjh-mca-play .
}}}

Any components not in the trunk, but in one of the effected frameworks *must* be
updated. Contact the list, look at the RFC, or look at the diff for how to do this.

Sorry for the early commit of this, but I wanted to get it in today (per RFC) and
didn't know if I would have a chance later today.

This commit was SVN r18381.
2008-05-06 18:08:45 +00:00
Josh Hursey
3b4073e32c This commit fixes the checkpoint/restart functionality on the trunk. Included in this commit are:
* Extension to the ESS framework to support C/R
 * Fixed support for {{{snapc_base_establish_global_snapshot_dir}}}
 * Fixed FileM support
 * Misc. minor code modifications

There are some outstanding visability issues that I want to fix next.

This commit was SVN r17725.
2008-03-05 04:57:23 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00
Josh Hursey
158dda5458 Fix some overlapping code.
This commit was SVN r17067.
2008-01-08 15:40:21 +00:00
Josh Hursey
f7812baf5b forgot a bit of error checking in the last commit
This commit was SVN r16953.
2007-12-13 14:41:18 +00:00
Josh Hursey
a287c9cb65 This commit distinguishes the file transfer stage from the finish stage.
This commit also cleans up the checkpoint and terminate case making it more
precise than before. Previously the application could make a small amount of
progress between checkpoint completion and application termination. Now the
application will make no progress at all in this time span.

Additional minor change:
 - Start using OPAL_INT_TO_BOOL instead of if/else logic

This commit was SVN r16952.
2007-12-13 14:37:17 +00:00
Josh Hursey
0bf61a1b84 Move in some accumulated small features and minor bug fixes for C/R support.
{{{
svn merge -r 16447:16475 https://svn.open-mpi.org/svn/ompi/tmp/jjh-fgs .
}}}

This commit was SVN r16478.
2007-10-17 13:47:36 +00:00
Josh Hursey
ea0652d20f If we are going to pretend to do filem, then we should always pretend.
No one should be using this feature except for me. :)

This commit was SVN r16454.
2007-10-15 20:04:35 +00:00
Josh Hursey
e483c36cea Remove a big of debug in filem/rsh that should have never been committed.
A guesture towards overlapping file removal with metadata update.

This commit was SVN r16432.
2007-10-11 19:37:33 +00:00
Josh Hursey
aa8391f888 Local and global coordinators should be the only ones involved in the
movement of checkpoint files. This reduces the overhead on the applicaiton.

This commit was SVN r16412.
2007-10-09 19:52:47 +00:00
Josh Hursey
e10f476c87 Bring over the jjh-filem branch which contains a non-blocking FileM interface
and implementation. This has shown drastic performance benefit when
transferring Many files at roughly the same time.

I tested this for many different filem operations and everything was working
fine. Let me know if you have any problems with this functionality.

Some Notes:
 - opal-checkpoint now has a 'quiet' flag to keep it from being too verbose.

 - FileM RSH component is fully non-blocking.

 - FileM RSH component has incomming connection throttling since by default
   ssh only allows 10 concurrent scp connections to any single host. This
   default can be adjusted via an MCA parameter.
    {{{-mca filem_rsh_max_incomming 10}}}

 - There is an MCA parameter for max outgoing connections, but it is currently
   not implemented. If someone needs it then it should not be hard to implement.
    {{{-mca filem_rsh_max_outgoing 10}}}

 - Changed the FileM request structure so that it is a bit more explicit and
   flexible.

 - Moved the 'preload-binary' and 'preload-files' functionality into odls/base
   allowing for code reuse in the 'process' and 'default' ODLS components.

 - Fixed a bug in the process name resolution which broke the 'preload-*'
   functionality due to GPR table structure changes.

 - The FileM RSH component might be able to see even more speedup from using a
   thread pool to operate on the work_pool structures, but that is for future
   work.

 - Added a 'opal-show-help' file to ODLS Base

This commit was SVN r16252.
2007-09-27 13:13:29 +00:00
Josh Hursey
b5fc722c35 Add a flag to 'pretend' to do filem in snapc. This is useful when doing
performance characterization, and should not be used by anyone doing anything
else since it will not produce a globally consistent checkpoint in this mode.

This commit was SVN r16192.
2007-09-24 16:19:45 +00:00
Josh Hursey
b4c68c0925 Turn back on the absolute path protection for the moment.
It is masking a bug that I'm tracking down in the SNAPC FULL - FILEM interations

Also make sure to cleanout the filem structure before asking for another
checkpoint file when not storing the files in place.

This commit was SVN r16109.
2007-09-12 18:19:39 +00:00
Josh Hursey
a24e530f8e Some C/R fixes (more to come)
r15390 - Changed the paradigm in which the runtime worked by enabling the mpirun
process to become an orted and spawn processes. This broke the C/R for this 
special case as it required that the orted start the process, and that 
the hierarchy remains.
The fix was to allow the global coordinator to be a local coordinator as well
for this case.

r15528 - Changed the selection logic for the RML. This caused the application to
segv if the 'ftrm' wrapper component was selected as it tried to modify a NULL
pointer.
The fix was to move the 'module swap' code into the init() function, and swap
when passed a NULL pointer. It sounds bad, but actually cleans up the code a bit
more.

Still have to fix the 'routed' framework.

This commit was SVN r15566.

The following SVN revision numbers were found above:
  r15390 --> open-mpi/ompi@bd65f8ba88
  r15528 --> open-mpi/ompi@39a6057fc6
2007-07-23 20:13:37 +00:00
Brian Barrett
5b9fa7e998 reapply r15517 and r15520, which were removed in r15527 so that I could get
the RML/OOB merge in slightly easier

This commit was SVN r15530.

The following SVN revision numbers were found above:
  r15517 --> open-mpi/ompi@41977fcc95
  r15520 --> open-mpi/ompi@9cbc9df1b8
  r15527 --> open-mpi/ompi@2d17dd9516
2007-07-20 02:34:29 +00:00
Brian Barrett
2d17dd9516 temporarily back our r15517 and 15520 so that I can get the RML / OOB changes
to cleanly apply

This commit was SVN r15527.

The following SVN revision numbers were found above:
  r15517 --> open-mpi/ompi@41977fcc95
2007-07-20 01:10:34 +00:00
Ralph Castain
41977fcc95 Remove the cellid field from the orte_process_name_t structure. This only affects a handful of files in itself, but...
Cleanup ALL instances of output involving the printing of orte_process_name_t structures using the ORTE_NAME_ARGS macro so that the number of fields and type of data match. Replace those values with a new macro/function pair ORTE_NAME_PRINT that outputs a string (using the new thread safe data capability) so that any future changes to the printing of those structures can be accomplished with a change to a single point.

Note that I could not possibly find outputs that directly print the orte_process_name_t fields, but only dealt with those that used ORTE_NAME_ARGS. Hence, you may still have a few outputs that bark during compilation. Also, I could only verify those that fall within environments I can compile on, so other environments may yield some minor warnings.

This commit was SVN r15517.
2007-07-19 20:56:46 +00:00
Josh Hursey
84f102c343 Fix/Cleanup the Checkpoint Error propagation through the Snapc Full component.
This commit was SVN r15175.
2007-06-22 16:14:25 +00:00
Josh Hursey
b9da59ebc3 Fix the way we determine which sequence number to restart with.
Create a sentinel value in the metadata file to clearly indicate
that the sequence number is complete (versus in progress). This
way we do not try to restart from an invalid sequence number
which can lead to badness.

This commit was SVN r14423.
2007-04-19 15:04:27 +00:00
Josh Hursey
6ee0c641fd Cleanup the output from orte-checkpoint so it is a bit more clear and references
the sequence number.

Before:
[...] Finished - Global Snapshot Reference: ompi_global_snapshot_1234.ckpt

After:
Snashot Ref.:   1 ompi_global_snapshot_1234.ckpt

This commit was SVN r14381.
2007-04-15 14:28:56 +00:00
George Bosilca
f2a6b9394f Deal with the include spree. Protect "environ" on Windows.
Some others minors modifications in order to make it
compile [again] on Windows.

This commit was SVN r14188.
2007-04-01 16:16:54 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00