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5461 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
d71492108c (this is what r25545 should have been)
Per http://www.open-mpi.org/community/lists/users/2011/11/17862.php,
to make MPI_IN_PLACE (and other sentinel Fortran constants) work on OS
X, we need to use the following compiler (linker) flag:

    -Wl,-commons,use_dylibs 

So if we're compiling on OS X, test to see if that flag works with the
compiler. If so, add it to the wrapper FFLAGS and FCFLAGS (note that
per a future update, we'll only have one Fortran compiler anyway).

Fixes trac:1982. 

This commit was SVN r25547.

The following SVN revision numbers were found above:
  r25545 --> open-mpi/ompi@7f9ae11faf

The following Trac tickets were found above:
  Ticket 1982 --> https://svn.open-mpi.org/trac/ompi/ticket/1982
2011-11-29 23:28:38 +00:00
Jeff Squyres
6fbbfd0f7a Gah! r25545 acidentally included ''waaaay'' more stuff than it was
supposed to.  I.e., half-baked/not complete stuff.

This commit backs out all of r25545.  Sorry folks!

This commit was SVN r25546.

The following SVN revision numbers were found above:
  r25545 --> open-mpi/ompi@7f9ae11faf
2011-11-29 23:24:52 +00:00
Jeff Squyres
7f9ae11faf Per http://www.open-mpi.org/community/lists/users/2011/11/17862.php,
to make MPI_IN_PLACE (and other sentinel Fortran constants) work on OS
X, we need to use the following compiler (linker) flag:

    -Wl,-commons,use_dylibs 

So if we're compiling on OS X, test to see if that flag works with the
compiler.  If so, add it to the wrapper FFLAGS and FCFLAGS (note that
per a future update, we'll only have one Fortran compiler anyway).

Fixes trac:1982.  

This commit was SVN r25545.

The following Trac tickets were found above:
  Ticket 1982 --> https://svn.open-mpi.org/trac/ompi/ticket/1982
2011-11-29 23:05:54 +00:00
Terry Dontje
5209de048c add code to service_thread_start to handle EBADF returns from select. This commit fixes trac:2922.
This commit was SVN r25520.

The following Trac tickets were found above:
  Ticket 2922 --> https://svn.open-mpi.org/trac/ompi/ticket/2922
2011-11-29 16:49:59 +00:00
Samuel Gutierrez
375162c693 this commit fixes a few things. 1. silence warning in common sm. 2. remove unneeded config code in common sm. 3. move opal_shmem_base_close to a better place in opal_finalize. 4. fix opal_path_nfs output.
This commit was SVN r25518.
2011-11-28 23:41:19 +00:00
George Bosilca
0bd2bf9aae The number of segments accepted should be bounded by MCA_BTL_DES_MAX_SEGMENTS
and not by 2.

This commit was SVN r25515.
2011-11-28 17:19:12 +00:00
Nathan Hjelm
f8c8c641f1 added asserts to warn developers that ob1/csum match fragments do not support more than 2 segments
This commit was SVN r25514.
2011-11-28 16:12:25 +00:00
Samuel Gutierrez
b4edf0ff5c getting ready for 1.5 port of the shared memory enhancements. remove some unused/unneeded stuff and minor style update.
This commit was SVN r25513.
2011-11-28 16:08:32 +00:00
Matthias Jurenz
6b879bcf6e Changes to OTF:
- otfprofile[-mpi]:
                - fixed compile error with the PGI compiler

Changes to VT:
        - added support for LIBC [I/O] tracing on Cray XT platforms
        - vtrun:
                - do preload Dyninst runtime library (DYNINSTAPI_RT_LIB) when
                  instrumenting user functions by Dyninst

This commit was SVN r25505.
2011-11-25 11:51:08 +00:00
Ralph Castain
9b59d8de6f This is actually a much smaller commit than it appears at first glance - it just touches a lot of files. The --without-rte-support configuration option has never really been implemented completely. The option caused various objects not to be defined and conditionally compiled some base functions, but did nothing to prevent build of the component libraries. Unfortunately, since many of those components use objects covered by the option, it caused builds to break if those components were allowed to build.
Brian dealt with this in the past by creating platform files and using "no-build" to block the components. This was clunky, but acceptable when only one organization was using that option. However, that number has now expanded to at least two more locations.

Accordingly, make --without-rte-support actually work by adding appropriate configury to prevent components from building when they shouldn't. While doing so, remove two frameworks (db and rmcast) that are no longer used as ORCM comes to a close (besides, they belonged in ORCM now anyway). Do some minor cleanups along the way.

This commit was SVN r25497.
2011-11-22 21:24:35 +00:00
George Bosilca
61f273b987 Do not tolerate uninitialized variables.
This commit was SVN r25489.
2011-11-18 10:19:24 +00:00
Matthias Jurenz
4ec105182e Updated integrated VT to version 5.12
This commit was SVN r25483.
2011-11-17 10:02:38 +00:00
Ralph Castain
6310361532 At long last, the fabled revision to the affinity system has arrived. A more detailed explanation of how this all works will be presented here:
https://svn.open-mpi.org/trac/ompi/wiki/ProcessPlacement

The wiki page is incomplete at the moment, but I hope to complete it over the next few days. I will provide updates on the devel list. As the wiki page states, the default and most commonly used options remain unchanged (except as noted below). New, esoteric and complex options have been added, but unless you are a true masochist, you are unlikely to use many of them beyond perhaps an initial curiosity-motivated experimentation.

In a nutshell, this commit revamps the map/rank/bind procedure to take into account topology info on the compute nodes. I have, for the most part, preserved the default behaviors, with three notable exceptions:

1. I have at long last bowed my head in submission to the system admin's of managed clusters. For years, they have complained about our default of allowing users to oversubscribe nodes - i.e., to run more processes on a node than allocated slots. Accordingly, I have modified the default behavior: if you are running off of hostfile/dash-host allocated nodes, then the default is to allow oversubscription. If you are running off of RM-allocated nodes, then the default is to NOT allow oversubscription. Flags to override these behaviors are provided, so this only affects the default behavior.

2. both cpus/rank and stride have been removed. The latter was demanded by those who didn't understand the purpose behind it - and I agreed as the users who requested it are no longer using it. The former was removed temporarily pending implementation.

3. vm launch is now the sole method for starting OMPI. It was just too darned hard to maintain multiple launch procedures - maybe someday, provided someone can demonstrate a reason to do so.

As Jeff stated, it is impossible to fully test a change of this size. I have tested it on Linux and Mac, covering all the default and simple options, singletons, and comm_spawn. That said, I'm sure others will find problems, so I'll be watching MTT results until this stabilizes.

This commit was SVN r25476.
2011-11-15 03:40:11 +00:00
Jeff Squyres
e8dcad6017 This typo has been here since August 2005. :-)
This commit was SVN r25468.
2011-11-11 03:01:52 +00:00
Brian Barrett
45a27e4f9f For now, ignore LINK event
This commit was SVN r25467.
2011-11-11 02:49:03 +00:00
Brad Benton
96395c916e de-tab'd
This commit was SVN r25465.
2011-11-09 19:45:12 +00:00
Brad Benton
0712b911a5 Updated IBM copyright
This commit was SVN r25464.
2011-11-09 19:38:53 +00:00
Mike Dubman
00c27afd52 fix pid
This commit was SVN r25463.
2011-11-09 17:53:59 +00:00
Nathan Hjelm
d603f31976 removed ptr member from seg_key union
This commit was SVN r25460.
2011-11-08 15:44:54 +00:00
Mike Dubman
71398b658e fix: OMPI_ERR_CONNECTION_FAILED available in v1.5, unavailable in trunk
This commit was SVN r25459.
2011-11-08 12:34:01 +00:00
George Bosilca
3d318a4c26 Put the interface of our MPIR support in sync with the document accepted by the MPI
Forum (http://www.mpi-forum.org/docs/mpir-specification-10-11-2010.pdf).

This commit was SVN r25456.
2011-11-08 01:24:16 +00:00
Mike Dubman
4cf9e1323d fix: return correct error on connection failure
This commit was SVN r25452.
2011-11-07 06:13:17 +00:00
Nathan Hjelm
8962ce25b0 fixed some compiler errors caused by seg_key changes. osc/rdma may need to be updated to use btls that use 128 bit segment keys
This commit was SVN r25448.
2011-11-06 20:19:14 +00:00
Samuel Gutierrez
e03bc93fb7 only use pmi grpcomm and pubsub during the direct launch case. use PMI environment variable to setup vpid in ess alps on cray xe systems. add pmi test code.
This commit was SVN r25447.
2011-11-06 17:28:40 +00:00
Nathan Hjelm
520a7c570e changes to seg_key needed for a new btl
This commit was SVN r25445.
2011-11-06 16:19:09 +00:00
Jeff Squyres
38451d4972 Add the MPI API version to the ompi_info output. How did we never
have this in there before?

This commit was SVN r25437.
2011-11-04 23:30:59 +00:00
Rolf vandeVaart
f777fe8eba Change tab to spaces.
This commit was SVN r25433.
2011-11-04 17:18:30 +00:00
Christopher Yeoh
fb57a74a40 Removes pointless memmove which because of a previous memcpy will always
have identical source and destination pointers. See #2871
Plugs a couple of minor memory leaks related to remote qp info

This commit was SVN r25431.
2011-11-04 00:15:08 +00:00
Jeff Squyres
1d6d39d2ea Missed this free/re-strdup
This commit was SVN r25426.
2011-11-03 11:31:37 +00:00
Jeff Squyres
6139256e45 v may get incremented, so be sure to save the ''original'' strdup'ed
pointer and free ''that'' -- not the (possibly incremented) pointer

This commit was SVN r25425.
2011-11-03 11:23:17 +00:00
Mike Dubman
7595a80a63 fix self pid
This commit was SVN r25424.
2011-11-03 06:46:20 +00:00
Nathan Hjelm
211e2dbdf3 clean up tab characters
This commit was SVN r25413.
2011-11-02 15:07:57 +00:00
Jeff Squyres
12d4280d0b Fix a bunch of memory leaks
This commit was SVN r25411.
2011-11-01 20:22:49 +00:00
Ralph Castain
14966e0f8f Cleanup PMI startup - if a component isn't selected, it should finalize PMI IFF it started it. Otherwise, components that aren't selected can finalize PMI when it is in use by other parts of the system.
This commit was SVN r25407.
2011-11-01 16:25:12 +00:00
Mike Dubman
3edd77ea25 update mxm plugin to mxm api change: pass synchronous request as an opcode instead of a flag
This commit was SVN r25403.
2011-10-31 22:36:15 +00:00
Mike Dubman
6b50ba22a6 select mxm ptl based on user preferences
This commit was SVN r25401.
2011-10-31 10:17:43 +00:00
Samuel Gutierrez
0ba13e2f8e fix typo. use PMI_Initialized for init status instead of PMI_Init.
This commit was SVN r25378.
2011-10-27 22:41:50 +00:00
Nathan Hjelm
ee087de073 added fast boxes to vader
This commit was SVN r25376.
2011-10-27 20:22:46 +00:00
Mike Dubman
f96ae43e23 pass jobid to mxm/sm module
This commit was SVN r25375.
2011-10-27 13:14:52 +00:00
Nathan Hjelm
82efe131dc made btl_vader_max_inline_send a configurable parameter and updated and enabled sendi
This commit was SVN r25374.
2011-10-26 22:15:42 +00:00
Nathan Hjelm
033179d6ac fixed bug in frag initialization
This commit was SVN r25373.
2011-10-26 19:29:37 +00:00
George Bosilca
6fdb040eef ORTE_ERROR to OPAL_ERROR.
This commit was SVN r25372.
2011-10-26 15:59:43 +00:00
George Bosilca
9d8e84142f Survivor!!!
This commit was SVN r25371.
2011-10-26 00:58:55 +00:00
Samuel Gutierrez
ae66347c7a added GNI configure script.
This commit was SVN r25370.
2011-10-25 22:15:16 +00:00
Nathan Hjelm
05114ffb51 fixed off by one error
This commit was SVN r25369.
2011-10-25 22:07:47 +00:00
George Bosilca
72f731f25f The SM2 collective component has not been updated in a long
time. Rich, the original developer, agrees with this removal.

This commit was SVN r25368.
2011-10-25 22:07:09 +00:00
Nathan Hjelm
e887d595c7 fix potential bug with non-contiguous sends
This commit was SVN r25367.
2011-10-25 19:21:45 +00:00
Nathan Hjelm
433cfa3665 use single copy for some sends
This commit was SVN r25365.
2011-10-25 18:38:42 +00:00
Mike Dubman
9ffeeb69d9 fix help message
This commit was SVN r25364.
2011-10-25 14:02:43 +00:00
Samuel Gutierrez
663f4546f5 fix define typo in psm mtl.
This commit was SVN r25362.
2011-10-24 18:38:12 +00:00