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Граф коммитов

62 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
d64881f040 psm_am.h: add missing file from libfabric snapshot
This is just about to be fixed upstream, but "make dist" was not
including this file in the libfabric tarball.
2014-12-08 11:39:08 -08:00
Jeff Squyres
d02756cdbb libfabric: various configury updates
1. Ensure to override CFLAGS properly.  Move the setting of CFLAGS outside the AM_CONDITIONAL so that Automake doesn't get confused (because CFLAGS is already set inside an AM_CONDITIONAL -- moving it outside the conditional ensure that this local CFLAGS override trumps all other CFLAGS overrides).
2. Only build libfabric on Linux. Add a little more configury to ensure that we only try to build libfabric on Linux.
3. Remove a dead/unused file
4. Fix typo in condition check
5. Use "false", not "/bin/false"
2014-12-08 11:39:07 -08:00
Jeff Squyres
92818d1fa5 usnic: remove SVN-style $Id$ tokens (and #idents)
This commit is also upstream in libfabric.
2014-12-08 11:39:07 -08:00
Jeff Squyres
c4e8d67515 libfabric: sync to upstream libfabric github
Bring down the latest from the libfabric github, as of
9d051567c8eb7adc2af89516f94c7d0539152948.
2014-12-08 11:37:37 -08:00
Jeff Squyres
7a96b58882 common verbs: remove usnic-specific code
Now that the usnic BTL uses libfabric, we can remove the
usnic-specific code from opal/mca/common/verbs.
2014-12-08 11:37:37 -08:00
Jeff Squyres
984982790a usnic: convert from verbs to libfabric (yay!)
This commit represents the conversion of the usnic BTL from verbs to
libfabric.

For the moment, libfabric is embedded in Open MPI (currently in the
usnic BTL).  This is because the libfabric API is still changing, and
also has not yet been released.  Ultimately, this embedded copy of
libfabric will likely disappear and the usnic BTL will rely on an
external installation of libfabric.

New configure options:

* --with-libfabric: will cause configure to fail if libfabric support
    cannot be built
* --without-libfabric: will prevent libfabric support from being built
* --with-libfabric=DIR: use an external libfabric installation
* --with-libfabric-libdir=LIBDIR: when paired with --with-libfabric=DIR,
    use LIBDIR for the libfabric installation library dir

The --with-libnl3[-libdir] arguments are now gone.
2014-12-08 11:37:37 -08:00
George Bosilca
324e43909d Enable CUDA support on Mac OS X. 2014-11-20 13:51:10 -06:00
Ralph Castain
780c93ee57 Per the PR and discussion on today's telecon, extend the process name definition as a two-field struct of uint32_t's down to the OPAL layer. This resolves issues created by prior commits that impacted both heterogeneous and SPARC support. This also simplifies the OMPI code base by removing the need for frequent memcpy's when transitioning between the OMPI/ORTE layers and OPAL.
We recognize that this means other users of OPAL will need to "wrap" the opal_process_name_t if they desire to abstract it in some fashion. This is regrettable, and we are looking at possible alternatives that might mitigate that requirement. Meantime, however, we have to put the needs of the OMPI community first, and are taking this step to restore hetero and SPARC support.
2014-11-11 17:00:42 -08:00
Howard Pritchard
6c8c9cb4a3 another fix for --enable-dlopen for ugni btl
missed a change to create libmca_common_ugni.la
file correctly.
2014-11-10 13:40:59 -07:00
Howard Pritchard
5c08aa8552 enable ugni btl to work without disable-dlopen
There were mistakes in the Makefiles for the ugni btl and
mca/common/ugni that prevented the ugni btl from being
used unless one happened to set the --disable-dlopen option
on the config line.

This commit fixes this problem.
2014-11-09 15:19:47 -07:00
Howard Pritchard
59f8d0a92d cleanup ugni compiler warnings 2014-11-06 12:25:10 -07:00
Jeff Squyres
9334abc474 Makefile: fix problems with static linking
Avoid a problem with double-derefence of a variable macro name (i.e.,
a macro with part of its name from an AC_SUBST, such as
```$(foo@BAR@baz)```.

In what might be a bug in Automake 1.14.1, if you do a pattern like
this:

```makefile
lib_LTLIBRARIES = lib@A_PREFIX@a_lib.la
noinst_LTLIBRARIES = lib@A_PREFIX@a_noinst.la

lib@A_PREFIX@a_lib_la_SOURCES = a.c

lib@A_PREFIX@a_noinst_la_SOURCES = $(lib@A_PREFIX@a_lib_la_SOURCES)
```

Then in the resulting Makefile, the value of
```$(lib@A_PREFIX@a_lib_la_OBJECTS)``` will be *blank* (when it really
should be ```a.o```).

To workaround this potential bug, I've simply avoided doing
double-derefences like this, and effectively set the second
```_SOURCES``` line equal to ```a.c``` (just like the first
```_SOURCES``` line).

Fixes #250.
2014-10-24 16:27:54 -07:00
Jeff Squyres
c22e1ae33b configury: new OPAL_SET_LIB_PREFIX/ORTE_SET_LIB_PREFIX macros
These two macros set the prefix for the OPAL and ORTE libraries,
respectively.  Specifically, the OPAL library will be named
libPREFIXopen-pal.la and the ORTE library will be named
libPREFIXopen-rte.la.

These macros must be called, even if the prefix argument is empty.

The intent is that Open MPI will call these macros with an empty
prefix, but other projects (such as ORCM) will call these macros with
a non-empty prefix.  For example, ORCM libraries can be named
liborcm-open-pal.la and liborcm-open-rte.la.

This scheme is necessary to allow running Open MPI applications under
systems that use their own versions of ORTE and OPAL.  For example,
when running MPI applications under ORTE, if the ORTE and OPAL
libraries between OMPI and ORCM are not identical (which, because they
are released at different times, are likely to be different), we need
to ensure that the OMPI applications link against their ORTE and OPAL
libraries, but the ORCM executables link against their ORTE and OPAL
libraries.
2014-10-22 10:32:19 -07:00
Howard Pritchard
ebc368d26b remove GNI_RDMAMODE_FENCE bit in GNI_PostRdma
The GNI_RDMAMODE_FENCE bit was a left over from
async progress work that is not needed at this point
in the gni BTL.  Removing the bit also allows
for the removal of the GNI_CDM_MODE_BTE_SINGLE_CHANNEL
bit from the GNI_CdmCreate call.
2014-10-09 12:41:19 -06:00
Howard Pritchard
9947758d98 initial thread safety for ugni btl
This commit adds initial ugni thread safety support.
With this commit, sun thread tests (excepting MPI-2 RMA)
pass with various process counts and threads/process.
Also osu_latency_mt passes.
2014-10-08 10:13:22 -06:00
rolfv
697b18db63 Making async copy the default 2014-10-03 06:42:18 -07:00
Rolf vandeVaart
399dc3db43 Code to check for managed memory. Configure support also.
This commit was SVN r32801.
2014-09-26 16:24:45 +00:00
Rolf vandeVaart
35858f837a Revert r32713. Have different code for this.
This commit was SVN r32800.

The following SVN revision numbers were found above:
  r32713 --> open-mpi/ompi@9a2bab0e27
2014-09-26 14:56:18 +00:00
Rolf vandeVaart
9a2bab0e27 Add support for detecting CUDA managed memory. Disabled for now.
This commit was SVN r32713.
2014-09-11 21:07:17 +00:00
Ralph Castain
f1a33b6476 Use the accessor function to get the jobid and vpid
This commit was SVN r32672.
2014-09-06 19:18:21 +00:00
Howard Pritchard
2a12fd833d Fix compile problem from pmix merge
This commit was SVN r32626.
2014-08-28 22:14:12 +00:00
Ralph Castain
aec5cd08bd Per the PMIx RFC:
WHAT:    Merge the PMIx branch into the devel repo, creating a new
               OPAL “lmix” framework to abstract PMI support for all RTEs.
               Replace the ORTE daemon-level collectives with a new PMIx
               server and update the ORTE grpcomm framework to support
               server-to-server collectives

WHY:      We’ve had problems dealing with variations in PMI implementations,
               and need to extend the existing PMI definitions to meet exascale
               requirements.

WHEN:   Mon, Aug 25

WHERE:  https://github.com/rhc54/ompi-svn-mirror.git

Several community members have been working on a refactoring of the current PMI support within OMPI. Although the APIs are common, Slurm and Cray implement a different range of capabilities, and package them differently. For example, Cray provides an integrated PMI-1/2 library, while Slurm separates the two and requires the user to specify the one to be used at runtime. In addition, several bugs in the Slurm implementations have caused problems requiring extra coding.

All this has led to a slew of #if’s in the PMI code and bugs when the corner-case logic for one implementation accidentally traps the other. Extending this support to other implementations would have increased this complexity to an unacceptable level.

Accordingly, we have:

* created a new OPAL “pmix” framework to abstract the PMI support, with separate components for Cray, Slurm PMI-1, and Slurm PMI-2 implementations.

* Replaced the current ORTE grpcomm daemon-based collective operation with an integrated PMIx server, and updated the grpcomm APIs to provide more flexible, multi-algorithm support for collective operations. At this time, only the xcast and allgather operations are supported.

* Replaced the current global collective id with a signature based on the names of the participating procs. The allows an unlimited number of collectives to be executed by any group of processes, subject to the requirement that only one collective can be active at a time for a unique combination of procs. Note that a proc can be involved in any number of simultaneous collectives - it is the specific combination of procs that is subject to the constraint

* removed the prior OMPI/OPAL modex code

* added new macros for executing modex send/recv to simplify use of the new APIs. The send macros allow the caller to specify whether or not the BTL supports async modex operations - if so, then the non-blocking “fence” operation is used, if the active PMIx component supports it. Otherwise, the default is a full blocking modex exchange as we currently perform.

* retained the current flag that directs us to use a blocking fence operation, but only to retrieve data upon demand

This commit was SVN r32570.
2014-08-21 18:56:47 +00:00
Rolf vandeVaart
c53c981506 Fix initialization and cleanup code for CUDA-aware code. Eliminates all resource leaks.
This commit was SVN r32512.
2014-08-12 19:41:46 +00:00
Gilles Gouaillardet
b565e69b86 check-help-strings cleanup
This commit was SVN r32491.
2014-08-11 03:19:57 +00:00
Rolf vandeVaart
876232e6d0 Fix previous checkin.
This commit was SVN r32468.
2014-08-08 18:58:25 +00:00
George Bosilca
5df7451429 Fix the #include for the common sm.
This commit was SVN r32467.
2014-08-08 18:30:27 +00:00
Howard Pritchard
a1f6ecf1e6 initial fixes for ugni btl move to opal
This commit was SVN r32466.
2014-08-08 18:02:46 +00:00
Rolf vandeVaart
ac16af0bff Small fix for case where no libcuda.so.1 is found.
This commit was SVN r32461.
2014-08-08 16:05:19 +00:00
Ralph Castain
db89071dc2 Cleanup the moved component's Makefile.am to use the opal instead of ompi directories
This commit was SVN r32370.
2014-07-31 04:41:04 +00:00
Ralph Castain
d674e22433 Remove stale include as header no longer exists. Add missing header
This commit was SVN r32336.
2014-07-29 01:24:27 +00:00
Nathan Hjelm
0e47441333 Remove unused files
This commit was SVN r32335.
2014-07-28 22:01:16 +00:00
Nathan Hjelm
1407c1f501 Remove RML code from common/sm
The only user of this code was coll/sm. I implemented a basic replacement
for the removed code. This gets the trunk compiling again with
--disable-dlopen.

This commit was SVN r32333.
2014-07-28 22:00:12 +00:00
Nathan Hjelm
603ba71b0d Ignore components broken by the BTL move.
common/ofacm is only used by the iboffload code in ompi. This code does
not currently work so it is safe to ignore these components until it is
fixed.

This commit was SVN r32331.
2014-07-28 21:24:18 +00:00
George Bosilca
4d3d421b06 Cleanup (not tested).
This commit was SVN r32326.
2014-07-26 22:19:07 +00:00
George Bosilca
de2cb71790 Rename the help file.
This commit was SVN r32322.
2014-07-26 20:16:28 +00:00
Ralph Castain
552c9ca5a0 George did the work and deserves all the credit for it. Ralph did the merge, and deserves whatever blame results from errors in it :-)
WHAT:    Open our low-level communication infrastructure by moving all necessary components (btl/rcache/allocator/mpool) down in OPAL

All the components required for inter-process communications are currently deeply integrated in the OMPI layer. Several groups/institutions have express interest in having a more generic communication infrastructure, without all the OMPI layer dependencies.  This communication layer should be made available at a different software level, available to all layers in the Open MPI software stack. As an example, our ORTE layer could replace the current OOB and instead use the BTL directly, gaining access to more reactive network interfaces than TCP.  Similarly, external software libraries could take advantage of our highly optimized AM (active message) communication layer for their own purpose.  UTK with support from Sandia, developped a version of Open MPI where the entire communication infrastucture has been moved down to OPAL (btl/rcache/allocator/mpool). Most of the moved components have been updated to match the new schema, with few exceptions (mainly BTLs where I have no way of compiling/testing them). Thus, the completion of this RFC is tied to being able to completing this move for all BTLs. For this we need help from the rest of the Open MPI community, especially those supporting some of the BTLs.  A non-exhaustive list of BTLs that qualify here is: mx, portals4, scif, udapl, ugni, usnic.

This commit was SVN r32317.
2014-07-26 00:47:28 +00:00
Nathan Hjelm
8ab9b628b5 Add missing file to tarball
This commit was SVN r32181.
2014-07-09 18:01:05 +00:00
Nathan Hjelm
563eaf0726 Fix support for Cray alps
The alps ras and plm components were broken by recent changes in ORTE. This
commit resolves those issues.

Changes:

 - Define PMI2_SUCCESS if it isn't defined. This fixes a problem with Cray's
   PMI implementation which does not define (for some reason) PMI2_SUCCESS. We
   had previously just used PMI_SUCCESS.

 - Add missing definition and a typo in pml_alps_module.

 - launch_id is no longer available in the orte_node_t structure. Use the
   attribute lookup to get the value.

 - Do not use an O(n^2) sorting algorithm when putting alps nodes in order. Use
   opal_list_sort instead (O(nlogn)).

This commit was SVN r32076.
2014-06-24 21:29:04 +00:00
Ralph Castain
304fe06e1b Don't spew warnings if PMI_FD isn't present - it isn't an error.
This commit was SVN r31911.
2014-06-01 13:40:12 +00:00
Mike Dubman
e85e0e926d PMI: hotfix for PMI1 support
Based on thread: http://www.open-mpi.org/community/lists/devel/2014/06/index.php

This commit was SVN r31909.
2014-06-01 06:43:05 +00:00
Ralph Castain
1107f9099e Per the RFC issued here:
http://www.open-mpi.org/community/lists/devel/2014/05/14827.php

Refactor PMI support

This commit was SVN r31907.
2014-06-01 04:28:17 +00:00
Ralph Castain
a8e2d6c3a6 The bulk of the remaining renaming changes, in one final glorious "blob". Thanks to Jeff for some help chasing down a few spots. Per chat with Jeff, we decided to cleanup a few things that were historical in nature:
top_ompi_srcdir  ->  OMPI_TOP_SRCDIR
top_ompi_builddir -> OMPI_TOP_BUILDDIR

We also split the srcdir/builddir flags according to their local tree (e.g., OPAL_TOP_SRCDIR), and tied them all together in configure.ac. Renamed ompi_ignore and ompi_unignore to be opal_<foo> as these are agnostic markers.

Only thing left is ompilibdir being treated similar to what we dif for srcdir/builddir. Coming soon.

This commit was SVN r31678.
2014-05-07 21:48:53 +00:00
Ralph Castain
c4c9bc1573 As per the RFC:
http://www.open-mpi.org/community/lists/devel/2014/04/14496.php

Revamp the opal database framework, including renaming it to "dstore" to reflect that it isn't a "database". Move the "db" framework to ORTE for now, soon to move to ORCM

This commit was SVN r31557.
2014-04-29 21:49:23 +00:00
Brian Barrett
0d8b57211a add missing include
This commit was SVN r28900.
2013-07-21 20:18:17 +00:00
Nathan Hjelm
1e8ba2b8cf fix condition in common/pmi init that c caused pmi to fail if PMI2_Init succeeds
This commit was SVN r28856.
2013-07-19 02:43:42 +00:00
Ralph Castain
4eb0dfa039 This has apparently been wrong for some time! Fix the common/pmi libraries so we build them dynamic so they can be properly linked into the components that use them. Define required library version numbers and so some other cuteness to make it all work.
cmr:v1.7.3:reviewer=jsquyres

This commit was SVN r28842.
2013-07-18 18:42:42 +00:00
Ralph Castain
92c6b806b9 Based on a patch submitted by Piotr Lesnicki of Bull, cleanup the PMI2 support. This has not been tested yet on multiple environments (e.g., Cray), so it needs more evaluation prior to moving to the 1.7 branch.
cmr:v1.7.3:reviewer=rhc

This commit was SVN r28837.
2013-07-18 14:46:07 +00:00
Joshua Ladd
0b5c1f2ea8 Add 'generic' support for PMI2 (previously, we checked for PMI2 only on Cray systems.) If your resource manager (e.g. SLURM) has support for PMI2, then the --with-pmi configure flag will enable its usage. If you don't have PMI2, then you will fallback to regular old PMI1. This patch was submitted by Ralph Castain and reviewed and pushed by Josh Ladd. This should be added to cmr:v1.7:reviewer=jladd
This commit was SVN r28666.
2013-06-21 15:28:14 +00:00
Ralph Castain
bd9265c560 Per the meeting on moving the BTLs to OPAL, move the ORTE database "db" framework to OPAL so the relocated BTLs can access it. Because the data is indexed by process, this requires that we define a new "opal_identifier_t" that corresponds to the orte_process_name_t struct. In order to support multiple run-times, this is defined in opal/mca/db/db_types.h as a uint64_t without identifying the meaning of any part of that data.
A few changes were required to support this move:

1. the PMI component used to identify rte-related data (e.g., host name, bind level) and package them as a unit to reduce the number of PMI keys. This code was moved up to the ORTE layer as the OPAL layer has no understanding of these concepts. In addition, the component locally stored data based on process jobid/vpid - this could no longer be supported (see below for the solution).

2. the hash component was updated to use the new opal_identifier_t instead of orte_process_name_t as its index for storing data in the hash tables. Previously, we did a hash on the vpid and stored the data in a 32-bit hash table. In the revised system, we don't see a separate "vpid" field - we only have a 64-bit opaque value. The orte_process_name_t hash turned out to do nothing useful, so we now store the data in a 64-bit hash table. Preliminary tests didn't show any identifiable change in behavior or performance, but we'll have to see if a move back to the 32-bit table is required at some later time.

3. the db framework was a "select one" system. However, since the PMI component could no longer use its internal storage system, the framework has now been changed to a "select many" mode of operation. This allows the hash component to handle all internal storage, while the PMI component only handles pushing/pulling things from the PMI system. This was something we had planned for some time - when fetching data, we first check internal storage to see if we already have it, and then automatically go to the global system to look for it if we don't. Accordingly, the framework was provided with a custom query function used during "select" that lets you seperately specify the "store" and "fetch" ordering.

4. the ORTE grpcomm and ess/pmi components, and the nidmap code,  were updated to work with the new db framework and to specify internal/global storage options.

No changes were made to the MPI layer, except for modifying the ORTE component of the OMPI/rte framework to support the new db framework.

This commit was SVN r28112.
2013-02-26 17:50:04 +00:00
Jeff Squyres
ab543fce58 We have no common components in opal any more, so we can remove this directory.
This commit was SVN r26169.
2012-03-20 21:21:49 +00:00