ports/openmpi
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Joseph Schuchart
e3b417c776 Add missing copyright header 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
e215eff43d UCX osc: atomic fetch-and-op only on 32 and 64bit values 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
434c9055ee UCX osc: fall back to get-compare-put for unsupported datatypes 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
7d5a6e3e8b UCX osc: safely load/store 64bit integer from variable size pointer 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
824afac483 UCX common: add non-blocking compare-and-swap 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
5f786bcce4 UCX osc: make MPI_Fetch_and_op non-blocking if possible 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
d8696aa8c4 UCX osc: centralize decision on whether to use AMOs 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
427d4bd226 UCX osc: do not acquire accumulate lock if exclusive lock was taken 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
471d76777a UCX osc: fence active operations before releasing accumulate lock and free memory if required 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
4d7a3856fa UCX osc: Use accumulate for operations/datatypes that are not covered by UCX 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
899f58cef5 UCX osc: simplify output address computation 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
d888b4fd76 UCX osc: correctly handle MPI_NO_OP 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
7cfc0e71da UCX osc: allow to asynchronously compare-and-swap 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
557ae80858 UCX osc: allow for overlap with (some) request-based atomic operations 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
1a3c6bbf35 UCX osc: re-use value returned by cswap to save additional get 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
8606a02b87 UCX osc: fix macro parameter name usage in OMPI_OSC_UCX_REQUEST_RETURN 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
d448efd49c UCX osc: properly clean up requests in case of errors 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Joseph Schuchart
73a183408f UCX osc: add support for acc_single_intrinsic info key / mca param 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-23 12:41:52 +02:00
Todd Kordenbrock
0a637967fa Use the active PML to call add_procs() 
ompi_mtl_portals4_get_endpoint() was incorrectly making a direct
call to ompi_mtl_portals4_add_procs().  Instead use the actve PML
to call add_procs().  If add_procs() fails, call ompi_rte_abort()
to terminate the job.

Signed-off-by: Todd Kordenbrock <thkgcode@gmail.com>
 2020-06-22 16:56:16 -05:00
Austen Lauria
b5eafdd5e0
Merge pull request #7844 from abouteiller/std/spawnkeys 
Some spawn info keys are standard mandated and cannot be deprecated
 2020-06-22 14:18:36 -04:00
Jeff Squyres
900994f602
Merge pull request #7849 from jsquyres/pr/ompi-info-tweaks 
ompi_info: trim some redundant output
 2020-06-22 11:46:26 -04:00
Nathan Hjelm
a3e276fb03
Merge pull request #7829 from devreal/osc-rdma-noncontig-requests 
osc rdma: check for outstanding transfers before completing a request
 2020-06-22 08:43:29 -06:00
Joseph Schuchart
70776b43fe Remove stale datatype functions from opal header 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-22 15:56:31 +02:00
Joseph Schuchart
d9d18acd49 Fix unintended optimizations detected by STACK 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-22 10:32:22 +02:00
Jeff Squyres
1395c025d4 ompi_info: trim some redundant output 
- Remove a duplicate "Configure host" output line
- No longer show the OPAL version.  Since OPAL has never separated
  into its own project, its version is always the same as Open MPI.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2020-06-20 14:17:07 -04:00
Christoph Niethammer
bd7f002675 Fix wrongly placed bounds check; mark failure as unlikely 
Signed-off-by: Christoph Niethammer <niethammer@hlrs.de>
 2020-06-20 16:09:38 +02:00
Jeff Squyres
e1e8b2a373
Merge pull request #7846 from jsquyres/pr/update-master-version 
VERSION: Bump to 5.0.0a1
 2020-06-20 09:49:22 -04:00
Jeff Squyres
3d7ab9368a VERSION: Bump to 5.0.0a1 
Now that we have an actual 4.1.x branch, we shouldn't be calling
master "v4.1.0a1" any more.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2020-06-19 18:20:39 -04:00
Aurelien Bouteiller
37bd4df01d
Beside the mpi-standard mandated keys, do not deprecate keys that 
direcly correspond to an `mpiexec` parameter.

Signed-off-by: Aurelien Bouteiller <bouteill@icl.utk.edu>
 2020-06-19 11:50:13 -04:00
Joseph Schuchart
602f833e57 Add missing OBJ_RELEASE to opal_reachable_allocate 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
ae3974d249 Add missing free call to mca_btl_tcp_component_exchange 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
950e08091c Add missing free to mca_base_alias_register 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
d310a20ecb Add missing free calls to mca_topo_treematch_dist_graph_create 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
e23dcca448 Add missing free calls to osc/ucx 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 14:30:07 +02:00
Joseph Schuchart
ede3c0840a Add missing free calls to osc/sm component_select 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:33:34 +02:00
Joseph Schuchart
d9b11b29cd Properly free memory in case of error in mca_common_ompio_prepare_to_group 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:31:14 +02:00
Joseph Schuchart
ed1ca1a84b Don't free memory escaping mca_common_ompio_prepare_to_group 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:30:38 +02:00
Joseph Schuchart
9a60f5b7fb Add missing free calls to ompi_coll_base_reduce_intra_basic_linear 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:27:36 +02:00
Joseph Schuchart
8e24c0d532 Add missing free calls to ompi_coll_base_allgather_intra_bruck 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:24:56 +02:00
Joseph Schuchart
dfc46180ea Add missing OBJ_RELEASE to ompi_attr_copy_all 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-19 12:21:18 +02:00
Austen Lauria
d03a99c647
Merge pull request #7776 from simonbyrne/patch-1 
Fix language in CUDA error
 2020-06-18 09:49:50 -04:00
Geoff Paulsen
692f96e87a
Merge pull request #7799 from markalle/interception_early_toc_read 
noinline to avoid compiler reading TOC before PATCHER_BEGIN
 2020-06-17 14:26:24 -05:00
Jeff Squyres
1c80f191bb
Merge pull request #7834 from jsquyres/pr/fix-asm-test-run-tests-script 
tests/asm/run_tests: fix basename usage
 2020-06-17 14:10:58 -04:00
Jeff Squyres
e8277d9d06 tests/asm/run_tests: fix basename usage 
Looks like this script was left over from quite a long time ago, and
was expecting CLI params from the "old"-style Automake test engine.
Update it to look for `--test-name` to get the test name, and update a
few other minor style things.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2020-06-17 10:23:13 -07:00
Jeff Squyres
fcdcb593bb
Merge pull request #7826 from jsquyres/pr/clang-6-and-7-hate-float16 
More carefully test "alternate" short float type in configure
 2020-06-17 12:55:37 -04:00
Jeff Squyres
2c171718ae check_alt_short_float: minor formatting tweak 
Prevent spurious #-style comments from appearing in the generated
configure script.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2020-06-17 08:39:29 -07:00
Jeff Squyres
47df60717c check_alt_short_float: ensure compiler supports math 
Even if the compiler supports an "alternate" short float type (e.g.,
_Float16), check to make sure that the compiler will correctly link
applications that perform mathematical operations on that type.

Carefully choose the mathematical test in the configure check to
ensure the mathematical operation is not removed by compiler
optimization (when setting CFLAGS=-O1 or higher).

Out of the box, clang 6.0.x and 7.0.x will fail to link applications
that try to perform addition (and other mathematical operations) on
_Float16 variables (an additional CLI flag is required to enable
software emulation of _Float16).  If we detect a situation where the
type is supported by a sample program fails to link and the basename
of $CC is "clang", emit a warning and point the user to a relevant
README.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
Signed-off-by: KAWASHIMA Takahiro <t-kawashima@fujitsu.com>
 2020-06-17 08:38:42 -07:00
Jeff Squyres
18cfcc8b70 osc/rdma: update supported BTL list 
"openib" no longer exists.

"tcp" had a typo.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
 2020-06-16 09:11:01 -07:00
Joseph Schuchart
85ed26f2f8 osc rdma: check for outstanding fragments before completing a request 
Signed-off-by: Joseph Schuchart <schuchart@hlrs.de>
 2020-06-16 17:45:00 +02:00
Edgar Gabriel
9af19ab205
Merge pull request #7819 from edgargabriel/pr/avg-fview-size 
common/ompio: use avg. file view size in the aggregator selection logic
 2020-06-16 10:04:31 -05:00