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Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00
Jeff Squyres
213b5d5c6e Per long threads on the mailing list and much confusion discussion
about linkers, have all OPAL, ORTE, and OMPI components '''not'' link
against the OPAL, ORTE, or OMPI libraries.

See ttp://www.open-mpi.org/community/lists/users/2007/10/4220.php for
details (or https://svn.open-mpi.org/trac/ompi/wiki/Linkers for a
better-formatted version of the same info).

This commit was SVN r16968.
2007-12-15 13:32:02 +00:00
George Bosilca
95c9fbdf45 Make sure the MX MTL component is shared between all files.
This commit was SVN r16545.
2007-10-22 18:06:52 +00:00
Brian Barrett
8b9e8054fd Move modex from pml base to general ompi runtime, sicne it's used by more
than just the PML/BTLs these days.  Also clean up the code so that it
handles the situation where not all nodes register information for a given
node (rather than just spinning until that node sends information, like
we do today).

Includes r15234 and r15265 from the /tmp/bwb-modex branch.

This commit was SVN r15310.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r15234
  r15265
2007-07-09 17:16:34 +00:00
Galen Shipman
8e7cce813e don't update MPI_ERROR
This commit was SVN r15004.
2007-06-11 21:40:29 +00:00
Galen Shipman
406b05bdc3 update copyright..
This commit was SVN r15003.
2007-06-11 21:17:49 +00:00
Galen Shipman
798cc2c5b8 handle MPI_STATUS_IGNORE in iprobe for the MTLs
This commit was SVN r15002.
2007-06-11 20:19:31 +00:00
George Bosilca
5d6c958066 Enable the MTLs to be compiled in a visibility featured environment.
This commit was SVN r14955.
2007-06-07 20:14:53 +00:00
Jeff Squyres
51f286d737 Just like r14289 on the ORTE trunk:
Per discussions with Brian and Ralph, make a slight correction in
where components are installed. Use $pkglibdir, not $libdir/openmpi,
so that when compiled in the orte trunk, components are installed to
the right directory (because the component search patch is checking
$pkglibdir).

This commit was SVN r14345.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r14289
2007-04-12 11:19:42 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
Galen Shipman
f98a442c82 Fix a problem in the selection logic for MX. Basically we need to be able to
open MTL MX and BTL MX and initialize them at the same time. The problem is
that both call mx_init and mx_finalize, solution is to add an external entity
that does the init and finalize (based on ref counting).

This commit was SVN r13576.
2007-02-09 03:19:38 +00:00
Galen Shipman
a94101fa62 mostly another hack around for PML selection, allows CM be select itself if an
MTL is available, if not OB1 is used. Still prevents DR and OB1 from stomping
on each other though. 

This commit was SVN r13481.
2007-02-03 02:01:18 +00:00
Brian Barrett
65b07140c0 clean up some of the printf warnings caused by the attribute code
This commit was SVN r13395.
2007-01-31 17:11:06 +00:00
Patrick Geoffray
b252cb82c8 oops, ".", not "->", copy error...
This commit was SVN r13287.
2007-01-24 19:16:46 +00:00
Patrick Geoffray
d58f6b2451 Free memory in synchronous send case if free_after requires it.
Fixes memory leak using synchronous sends and custom data types.

This commit was SVN r13286.
2007-01-24 19:10:38 +00:00
Brian Barrett
6f8b366acb Rename liborte to libopen-rte and libopal to libopen-pal per telecon today
and bug #632.

Refs trac:632

This commit was SVN r12762.

The following Trac tickets were found above:
  Ticket 632 --> https://svn.open-mpi.org/trac/ompi/ticket/632
2006-12-05 18:27:24 +00:00
Brian Barrett
bfbc281e93 Fix slow startup issue with the MX MTL. The problem is caused by mx_connect() being a one-sided operation from the API level, but not being an interrupting call when the target is not entering the MX library. So if most of the processes exit mtl_mx_add_procs() and enter the stage gate 2 barrier, the other processes can only progress their mx_connect() calls when the targets enter the mx library. Because the event library is in EV_ONELOOP mode, this only happens once a second. The mx progress thread (hidden in the MX library) also only wakes up once a second, so mx_connect calls can take a second to complete.
The temporary solution is to switch into EV_NONBLOCK mode earlier (right after the mx_connect loop) so that there isn't a giant slowdown when processes enter the stage gate 2 barrier before other proesses.  They will now not block in the event library for any period of time, which appears to have a 50% speedup when running at > 64 procs.

Refs trac:645

This commit was SVN r12713.

The following Trac tickets were found above:
  Ticket 645 --> https://svn.open-mpi.org/trac/ompi/ticket/645
2006-12-01 02:49:01 +00:00
Brian Barrett
993d2a7753 Fix for issue IU is seeing on BigRed with connections timing out during
MPI_INIT.  Use an infinite timeout, which is exactly what MPICH-MX does.

This commit was SVN r12669.
2006-11-27 20:10:27 +00:00
George Bosilca
bfbd0e61f6 Minimize the number of lines of code :)
This commit was SVN r12550.
2006-11-10 20:56:08 +00:00
George Bosilca
63462331c9 Reduce the number of branches. Keep the fast path as short as possible.
Remove some useless error checking. Add OPAL_UNLIKELY directives.

This commit was SVN r12477.
2006-11-07 23:59:32 +00:00
George Bosilca
108ea4dbe9 When the MX MTL complete a request, force a return from the progress function.
Decrease the latency by about 0.3 microseconds.

This commit was SVN r12454.
2006-11-06 23:13:07 +00:00
George Bosilca
dbec514b0f Optimize the generation of the match_bits and the mask.
This commit was SVN r12396.
2006-11-01 23:19:20 +00:00
George Bosilca
882b429f64 ompi_mtl_datatype_pack is not a data-type function (really) so it still
need the free_after (which btw has a different meaning that the one removed
from the data-type engine few minutes ago).

This commit was SVN r12333.
2006-10-27 00:15:53 +00:00
George Bosilca
126a68dc9a Big datatype commit. Remove all unused features of the datatype engine. As the memory
allocation logic is completely done outside the data-type engine (in the PML) there is
no need for any special case inside the data-type engine. There is less arguments for
the ompi_convertor_pack and ompi_convertor_unpack as well (the last field free_after is
not required anymore as there is no memory allocated in the engine itself). This change
affect all components using datatypes. I test most of them, but it might happens that I
miss some ... If it's the case please let me know (don't shoot the pianist!!).

This commit was SVN r12331.
2006-10-26 23:11:26 +00:00
George Bosilca
18d119bc06 No more warnings.
This commit was SVN r12181.
2006-10-18 21:10:11 +00:00
Brian Barrett
c3306f7073 * don't abort if we get a status error - just pass it on to the next layer up
This commit was SVN r11791.
2006-09-25 17:28:24 +00:00
George Bosilca
688a16ea78 A long time waiting patch. Get rid of the comm->c_pml_procs. It was (and that was
long ago) supposed to be used as a cache for accessing the PML procs. But in
all of the PMLs the PML proc contain only one field i.e. a pointer to the ompi_proc.
This pointer can be accessed using the c_remote_group easily. Therefore, there is no
meaning of keeping the PML procs around. Slim fast commit ...

This commit was SVN r11730.
2006-09-20 22:14:46 +00:00
Galen Shipman
0be42b22b9 Fix connection timeout error handling..
This commit was SVN r11651.
2006-09-14 14:02:14 +00:00
George Bosilca
3f0a7cad9e The last patch for Windows support. Mostly casting and conversion to C++ friendly headers.
This commit was SVN r11400.
2006-08-24 16:38:08 +00:00
Brian Barrett
292068b34b * check return status of module init
This commit was SVN r11235.
2006-08-16 21:27:57 +00:00
Brian Barrett
6d414f2d44 * use the MTL-specific output stream for all error messages
* use OPAL_OUTPUT_VERBOSE rather than printfs for debugging messages

This commit was SVN r11227.
2006-08-16 16:28:58 +00:00
Brian Barrett
dc74a6a8e1 * implement iprobe for the MX MTL
This commit was SVN r11211.
2006-08-15 22:16:50 +00:00
Brian Barrett
0d218c6bdc * implement cancel for MX
This commit was SVN r11209.
2006-08-15 21:59:37 +00:00
Brian Barrett
d3c6035ea9 * allow direct calling to work with the MX MTL. Had to move some types
around so that the myriexpress.h header wasn't included in the same
  header as the interface declarations

This commit was SVN r10817.
2006-07-14 21:32:03 +00:00
Galen Shipman
6ed255f114 Substantial changes to the CM PML, allows us to have a very thin request for
all but buffered and persistent requests. Unfortunately we were note able to
reuse the pml_base_request_t as it was just too heavy for our needs. Lots of
code for 2/10 usec ;-) 

This commit was SVN r10810.
2006-07-14 19:32:26 +00:00
George Bosilca
40f7d054f2 No more unused variables ...
This commit was SVN r10735.
2006-07-11 15:24:57 +00:00
Galen Shipman
9a1221bf7d fix buffered sends (don't use blocking sends!)
removed inaccurate comment.. 

This commit was SVN r10703.
2006-07-10 16:11:14 +00:00
Galen Shipman
5085061475 don't call unpack when we received directly into the user buffer.. the
convertor doesn't handle it properly
continue peeking until we don't get anything else.. 
close the endpoint before closing the library.. 
add a blocking send that uses mx_test .. 

This commit was SVN r10684.
2006-07-06 19:54:13 +00:00
Brian Barrett
ef6b7e170f * make mtl datatype wrapper code inline functions
This commit was SVN r10678.
2006-07-06 15:58:07 +00:00
Brian Barrett
ef8c6a249b * Fix up some direct-calling issues for the PML/MTL
This commit was SVN r10676.
2006-07-06 15:12:38 +00:00
Galen Shipman
c933c0f65f unpack the length actually received, not the length posted..
This commit was SVN r10668.
2006-07-05 22:16:46 +00:00
Galen Shipman
fe480cd003 change mask bits and don't call convertor if we received directly into the
user buffer.. 

This commit was SVN r10665.
2006-07-05 21:10:09 +00:00
George Bosilca
d2bf3844e9 Include the header file which define opal_output.
This commit was SVN r10648.
2006-07-04 06:23:01 +00:00
Brian Barrett
47725c9b02 * Add new PML (CM) and network drivers (MTL) for high speed
interconnects that provide matching logic in the library.
  Currently includes support for MX and some support for
  Portals
* Fix overuse of proc_pml pointer on the ompi_proc structuer, 
  splitting into proc_pml for pml data and proc_bml for
  the BML endpoint data
* bug fixes in bsend init code, which wasn't being used by
  the OB1 or DR PMLs...

This commit was SVN r10642.
2006-07-04 01:20:20 +00:00