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Граф коммитов

37 Коммитов

Автор SHA1 Сообщение Дата
Shiqing Fan
6f746cdb33 remove a unused file.
This commit was SVN r26645.
2012-06-25 10:17:21 +00:00
Ralph Castain
bd8b4f7f1e Sorry for mid-day commit, but I had promised on the call to do this upon my return.
Roll in the ORTE state machine. Remove last traces of opal_sos. Remove UTK epoch code.

Please see the various emails about the state machine change for details. I'll send something out later with more info on the new arch.

This commit was SVN r26242.
2012-04-06 14:23:13 +00:00
Ralph Castain
9b59d8de6f This is actually a much smaller commit than it appears at first glance - it just touches a lot of files. The --without-rte-support configuration option has never really been implemented completely. The option caused various objects not to be defined and conditionally compiled some base functions, but did nothing to prevent build of the component libraries. Unfortunately, since many of those components use objects covered by the option, it caused builds to break if those components were allowed to build.
Brian dealt with this in the past by creating platform files and using "no-build" to block the components. This was clunky, but acceptable when only one organization was using that option. However, that number has now expanded to at least two more locations.

Accordingly, make --without-rte-support actually work by adding appropriate configury to prevent components from building when they shouldn't. While doing so, remove two frameworks (db and rmcast) that are no longer used as ORCM comes to a close (besides, they belonged in ORCM now anyway). Do some minor cleanups along the way.

This commit was SVN r25497.
2011-11-22 21:24:35 +00:00
Ralph Castain
6310361532 At long last, the fabled revision to the affinity system has arrived. A more detailed explanation of how this all works will be presented here:
https://svn.open-mpi.org/trac/ompi/wiki/ProcessPlacement

The wiki page is incomplete at the moment, but I hope to complete it over the next few days. I will provide updates on the devel list. As the wiki page states, the default and most commonly used options remain unchanged (except as noted below). New, esoteric and complex options have been added, but unless you are a true masochist, you are unlikely to use many of them beyond perhaps an initial curiosity-motivated experimentation.

In a nutshell, this commit revamps the map/rank/bind procedure to take into account topology info on the compute nodes. I have, for the most part, preserved the default behaviors, with three notable exceptions:

1. I have at long last bowed my head in submission to the system admin's of managed clusters. For years, they have complained about our default of allowing users to oversubscribe nodes - i.e., to run more processes on a node than allocated slots. Accordingly, I have modified the default behavior: if you are running off of hostfile/dash-host allocated nodes, then the default is to allow oversubscription. If you are running off of RM-allocated nodes, then the default is to NOT allow oversubscription. Flags to override these behaviors are provided, so this only affects the default behavior.

2. both cpus/rank and stride have been removed. The latter was demanded by those who didn't understand the purpose behind it - and I agreed as the users who requested it are no longer using it. The former was removed temporarily pending implementation.

3. vm launch is now the sole method for starting OMPI. It was just too darned hard to maintain multiple launch procedures - maybe someday, provided someone can demonstrate a reason to do so.

As Jeff stated, it is impossible to fully test a change of this size. I have tested it on Linux and Mac, covering all the default and simple options, singletons, and comm_spawn. That said, I'm sure others will find problems, so I'll be watching MTT results until this stabilizes.

This commit was SVN r25476.
2011-11-15 03:40:11 +00:00
Ralph Castain
a3ce355a60 Revert r25453 and r25450 until we can fix the libevent2013 configure code - still not getting the includedir to eval correctly.
This commit was SVN r25454.

The following SVN revision numbers were found above:
  r25450 --> open-mpi/ompi@7f7d5c4f1f
  r25453 --> open-mpi/ompi@c9fe8c32e2
2011-11-07 16:23:44 +00:00
Ralph Castain
3e4165fd8d Cleanup includes
This commit was SVN r25418.
2011-11-02 18:28:28 +00:00
Wesley Bland
4e7ff0bd5e By popular demand the epoch code is now disabled by default.
To enable the epochs and the resilient orte code, use the configure flag:

--enable-resilient-orte

This will define both:

ORTE_ENABLE_EPOCH
ORTE_RESIL_ORTE

This commit was SVN r25093.
2011-08-26 22:16:14 +00:00
Wesley Bland
84be81df95 Standardize the initialization of the EPOCH's.
Everyone will be starting at MIN anyway (until we implement restart of course)
so there's no reason to set the epoch to INVALID and then immediately reset them
to MIN. This way there's less room to make mistakes later.

This commit was SVN r24829.
2011-06-28 14:20:33 +00:00
Wesley Bland
e1ba09ad51 Add a resilience to ORTE. Allows the runtime to continue after a process (or
ORTED) failure. Note that more work will be necessary to allow the MPI layer to
take advantage of this.

Per RFC:
http://www.open-mpi.org/community/lists/devel/2011/06/9299.php

This commit was SVN r24815.
2011-06-23 20:38:02 +00:00
Samuel Gutierrez
81f38b258a commit of new shared memory backing facility framework (shmem) and its components.
This commit was SVN r24795.
2011-06-21 15:41:57 +00:00
George Bosilca
6b52d8f519 The paffinity is apparently needed.
This commit was SVN r24749.
2011-06-06 01:20:01 +00:00
George Bosilca
1eccadbd87 No need for the paffinity here.
This commit was SVN r24742.
2011-06-02 17:16:25 +00:00
Ralph Castain
b47ec2ee87 Remove lingering references to opal_profile option
This commit was SVN r24709.
2011-05-18 18:27:29 +00:00
Ralph Castain
d34bab541d Remove the ompi-profiler tool and its attendant ompi-probe program. Also remove the grpcomm basic component since its only function was to support profiled clusters, which nobody was doing. :-(
This commit was SVN r24704.
2011-05-17 03:30:25 +00:00
Ralph Castain
ee68cd102c Fix the hier grpcomm module so modex results in correct data. The prior implementation stored the modex data as node-based attributes. This worked fine for BTL's such as openib where the interfaces were associated with the node. However, BTL's such as TCP have interfaces associated with a specific process, not a node. Thus, store the data in the modex database so it is correctly indexed.
This commit was SVN r24536.
2011-03-17 02:22:23 +00:00
Ralph Castain
40a2bfa238 WARNING: Work on the temp branch being merged here encountered problems with bugs in subversion. Considerable effort has gone into validating the branch. However, not all conditions can be checked, so users are cautioned that it may be advisable to not update from the trunk for a few days to allow MTT to identify platform-specific issues.
This merges the branch containing the revamped build system based around converting autogen from a bash script to a Perl program. Jeff has provided emails explaining the features contained in the change.

Please note that configure requirements on components HAVE CHANGED. For example. a configure.params file is no longer required in each component directory. See Jeff's emails for an explanation.

This commit was SVN r23764.
2010-09-17 23:04:06 +00:00
Ralph Castain
7608513158 Cleanup the code and add some comments to make it easier to understand. Add a bozo error check
This commit was SVN r23639.
2010-08-24 04:46:59 +00:00
Ralph Castain
12cd07c9a9 Start reducing our dependency on the event library by removing at least one instance where we use it to redirect the program counter. Rolf reported occasional hangs of mpirun in very specific circumstances after all daemons were done. A review of MTT results indicates this may have been happening more generally in a small fraction of cases.
The problem was tracked to use of the grpcomm.onesided_barrier to control daemon/mpirun termination. This relied on messaging -and- required that the program counter jump from the errmgr back to grpcomm. On rare occasions, this jump did not occur, causing mpirun to hang.

This patch looks more invasive than it is - most of the affected files simply had one or two lines removed. The essence of the change is:

* pulled the job_complete and quit routines out of orterun and orted_main and put them in a common place

* modified the errmgr to directly call the new routines when termination is detected

* removed the grpcomm.onesided_barrier and its associated RML tag

* add a new "num_routes" API to the routed framework that reports back the number of dependent routes. When route_lost is called, the daemon's list of "children" is checked and adjusted if that route went to a "leaf" in the routing tree

* use connection termination between daemons to track rollup of the daemon tree. Daemons and HNP now terminate once num_routes returns zero

Also picked up in this commit is the addition of a new bool flag to the app_context struct, and increasing the job_control field from 8 to 16 bits. Both trivial.

This commit was SVN r23429.
2010-07-17 21:03:27 +00:00
Abhishek Kulkarni
afbe3e99c6 * Wrap all the direct error-code checks of the form (OMPI_ERR_* == ret) with
(OMPI_ERR_* = OPAL_SOS_GET_ERR_CODE(ret)), since the return value could be a
 SOS-encoded error. The OPAL_SOS_GET_ERR_CODE() takes in a SOS error and returns
 back the native error code.

* Since OPAL_SUCCESS is preserved by SOS, also change all calls of the form
  (OPAL_ERROR == ret) to (OPAL_SUCCESS != ret). We thus avoid having to
  decode 'ret' to get the native error code.

This commit was SVN r23162.
2010-05-17 23:08:56 +00:00
Ralph Castain
18c7aaff08 Update the grpcomm framework to be more thread-friendly.
Modify the orte configure options to specify --enable-multicast such that it directs components to build or not instead of littering the code base with #if's. Remove those #if's where they used to occur.

Add a new grpcomm "mcast" module to support multicast operations. Still some work required to properly perform daemon collectives for comm_spawn operations. New module only builds when --enable-multicast is provided, and when specifically selected.

This commit was SVN r22709.
2010-02-25 01:11:29 +00:00
Ralph Castain
0ffa4f2f0c Ensure we cancel the lingering recv in the allgather code to avoid having incorrect counters.
Thanks to Damien for spotting the problem.

This commit was SVN r22301.
2009-12-14 13:21:56 +00:00
Ralph Castain
c45ff0d59f Take the next step towards fully utilizing static ports for the daemons to eliminate the initial "phone home" to mpirun by modifying the orted termination procedure to eliminate the need for a full barrier-like operation. Instead, we add a "onesided" barrier to the grpcomm framework API that releases the orted once it has completed its own contribution to the barrier - i.e., the orteds now exit as the "ack" message rolls up towards mpirun instead of sending the "ack" directly to mpirun.
This causes the orteds in the routing tree to remain alive until all termination "acks" from orteds below them have passed through. Thus, if we use static ports, we no longer require a direct orted-to-mpirun connection.

Also modify the binomial routed module so it conforms to what all the other routed modules do and have all messages pass along the routing tree instead of short-circuiting between orteds. This further reduces the number of ports being opened on backend nodes.

This commit was SVN r21203.
2009-05-11 14:11:44 +00:00
Greg Koenig
60485ff95f This is a very large change to rename several #define values from
OMPI_* to OPAL_*.  This allows opal layer to be used more independent
from the whole of ompi.

NOTE: 9 "svn mv" operations immediately follow this commit.

This commit was SVN r21180.
2009-05-06 20:11:28 +00:00
Ralph Castain
4be24521aa Modify the orte_process_info structure to handle a broader range of process types by replacing the individual booleans with a 32-bit bitmap. Use a set of #define's to define the individual bits, and a set of matching macros to test for them. Update the orte code base to use the macros instead of the booleans.
Minor mod to the ompi layer to use the new #define's - just one-line name replacements.

This commit was SVN r21144.
2009-05-04 11:07:40 +00:00
Rainer Keller
221fb9dbca ... Delayed due to notifier commits earlier this day ...
- Delete unnecessary header files using
   contrib/check_unnecessary_headers.sh after applying
   patches, that include headers, being "lost" due to
   inclusion in one of the now deleted headers...

   In total 817 files are touched.
   In ompi/mpi/c/ header files are moved up into the actual c-file,
   where necessary (these are the only additional #include),
   otherwise it is only deletions of #include (apart from the above
   additions required due to notifier...)

 - To get different MCAs (OpenIB, TM, ALPS), an earlier version was
   successfully compiled (yesterday) on:
   Linux locally using intel-11, gcc-4.3.2 and gcc-SVN + warnings enabled
   Smoky cluster (x86-64 running Linux) using PGI-8.0.2 + warnings enabled
   Lens cluster (x86-64 running Linux) using Pathscale-3.2 + warnings enabled

This commit was SVN r21096.
2009-04-29 01:32:14 +00:00
Rainer Keller
ec0ed48718 - Revert r20739
This commit was SVN r20742.

The following SVN revision numbers were found above:
  r20739 --> open-mpi/ompi@781caee0b6
2009-03-05 21:56:03 +00:00
Rainer Keller
a94438343b - Revert r20740
This commit was SVN r20741.

The following SVN revision numbers were found above:
  r20740 --> open-mpi/ompi@2a70618a77
2009-03-05 21:50:47 +00:00
Rainer Keller
2a70618a77 - Second patch, as discussed in Louisville.
Replace short macros in orte/util/name_fns.h
   to the actual fct. call.

 - Compiles on linux/x86-64

This commit was SVN r20740.
2009-03-05 21:14:18 +00:00
Rainer Keller
781caee0b6 - First of two or three patches, in orte/util/proc_info.h:
Adapt orte_process_info to orte_proc_info, and
   change orte_proc_info() to orte_proc_info_init().
 - Compiled on linux-x86-64
 - Discussed with Ralph

This commit was SVN r20739.
2009-03-05 20:36:44 +00:00
Rainer Keller
04567d3af0 - Header orte/mca/errmgr/errmgr.h is not needed.
Once again compiles fine with -Wimplicit-function-declaration   

This commit was SVN r20640.
2009-02-26 04:05:30 +00:00
Rainer Keller
96e1b9b747 - Header orte/mca/rml/rml.h is not needed if no occurence of orte_rml
or ORTE_RML.
   As the others compiles fine with -Wimplicit-function-declaration

This commit was SVN r20639.
2009-02-26 03:52:31 +00:00
Rainer Keller
b356e90fa1 - Get rid of include orte/util/proc_info.h, if not needed
Only proc_info.h-internal include file is opal/dss/dss_types.h
 - In one case (orte/util/hnp_contact.c) had to add proc_info.h again.
 - Local compilation (Linux/x86_64) w/ -Wimplicit-function-declaration
   works fine, no errors.

   Again, let's have MTT the last word.

This commit was SVN r20631.
2009-02-25 03:38:00 +00:00
Ralph Castain
8359477387 Modify the base collective algorithms to take an array of arbitrary vpids instead of assuming everything is ordered in a particular way. Modify the hier grpcomm module to support arbitrary mappings
This commit was SVN r20599.
2009-02-19 21:35:20 +00:00
Rainer Keller
d81443cc5a - On the way to get the BTLs split out and lessen dependency on orte:
Often, orte/util/show_help.h is included, although no functionality
   is required -- instead, most often opal_output.h, or               
   orte/mca/rml/rml_types.h                                           
   Please see orte_show_help_replacement.sh commited next.            

 - Local compilation (Linux/x86_64) w/ -Wimplicit-function-declaration
   actually showed two *missing* #include "orte/util/show_help.h"     
   in orte/mca/odls/base/odls_base_default_fns.c and                  
   in orte/tools/orte-top/orte-top.c                                  
   Manually added these.                                              

   Let's have MTT the last word.

This commit was SVN r20557.
2009-02-14 02:26:12 +00:00
Ralph Castain
4cdf91a8d4 Per the RFC, extend the current use of the ompi_proc_t flags field (without changing the field itself).
The prior ompi_proc_t structure had a uint8_t flag field in it, where only one
bit was used to flag that a proc was "local". In that context, "local" was
constrained to mean "local to this node".

This commit provides a greater degree of granularity on the term "local", to include tests
to see if the proc is on the same socket, PC board, node, switch, CU (computing
unit), and cluster.

Add #define's to designate which bits stand for which local condition. This
was added to the OPAL layer to avoid conflicting with the proposed movement of
the BTLs. To make it easier to use, a set of macros have been defined - e.g.,
OPAL_PROC_ON_LOCAL_SOCKET - that test the specific bit. These can be used in
the code base to clearly indicate which sense of locality is being considered.

All locations in the code base that looked at the current proc_t field have
been changed to use the new macros.

Also modify the orte_ess modules so that each returns a uint8_t (to match the
ompi_proc_t field) that contains a complete description of the locality of this
proc. Obviously, not all environments will be capable of providing such detailed
info. Thus, getting a "false" from a test for "on_local_socket" may simply
indicate a lack of knowledge.

This commit was SVN r20496.
2009-02-10 02:20:16 +00:00
Ralph Castain
c5b637418b Ensure that the various grpcomm modules use a common data set and packing order for modex operations so that jobs using different grpcomm modules can still perform connect/accept.
Have dynamic grpcomm operations update the nidmap/pidmap to support additional features.

This commit was SVN r20463.
2009-02-06 15:25:06 +00:00
Ralph Castain
c6c5bc17a0 Add a new hierarchical collective grpcomm component that performs modex and barrier across the procs instead of the daemons. Modeled on the tuned collectives. Collective code is in grpcomm base for eventual use by the daemon-based components as well.
This commit was SVN r20337.
2009-01-23 21:57:51 +00:00