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Граф коммитов

4253 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
71de03fc67 Cleanup the new naming requirements to ensure that info is correctly retrieved
Cleanup permissions

Restore singleton operations
2016-07-21 09:46:03 -07:00
Ralph Castain
2b55ee8118 Cleanup Coverity warnings 2016-07-20 20:31:58 -07:00
Ralph Castain
01a653d50a Remove a debug print in comm_cid.c. Update PMIx2 to include the revised PMIx_Get logic for higher performance by reducing the number of hash table lookups. Fix a bug where requests for data from a proc in another nspace could hang, or result in "not found".
Remove stale file reference

Restore autogen pass thru pmix

Remove generated file
2016-07-20 00:58:19 -07:00
Nathan Hjelm
03bce91de8 pmix/pmix2x: add missing increment in loop
This commit fixes a bug in the pmix2x client code where a loop
variable is not correctly incremented. This was leading to hangs and
crashes when creating intercommunicators. Also fixed two double
increments in other loops.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-07-18 10:35:05 -06:00
Jeff Squyres
72f41d4490 pmix: replace all tabs with spaces
No code or logic changes

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-07-17 15:08:33 -04:00
Jeff Squyres
1c32742c66 pmix_ext20: fix syntax error
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-07-17 15:04:12 -04:00
Ralph Castain
99f7096031 Fix permissions 2016-07-16 21:03:55 -07:00
Ralph Castain
d4071fbd1c Fix dynamic operations by ensuring that we only fire the debugger release if the debugger is attached, and that the OPAL pmix key for directing events to non-default handlers matches the PMIx spelling 2016-07-16 13:20:41 -07:00
Ralph Castain
1ceb35ba5c Fix singletons - do not include the PMIx tool URI in the environment provided to child processes 2016-07-13 17:33:34 -07:00
Ralph Castain
20a91c2baf Add a new --continuous flag to mpirun that directs ORTE to let a job continue running as app procs terminate. Don't attempt to restart them. Add event notification of abnormally terminating procs, and demonstrate that in the mpi_spin test program.
Cleanup debug message
2016-07-13 15:28:33 -07:00
Artem Polyakov
72585a905f opal/pmix: add blocking Fence to SLURM components.
Blocking fence is used in yalla del proc. Native pmix exposes this functionality.
We need to expose it for SLURM's s1/s2 components as well.

Also this commit fixes uninitialized `rc` in fencenb's of both
components.
2016-07-11 09:43:15 +03:00
Artem Polyakov
8e16f47492 Merge pull request #1688 from artpol84/fix_base64
Fix base64 implementation in pmix framework.
2016-07-07 10:47:50 +06:00
Gilles Gouaillardet
acda07472a configury: revamp and re-ident sub configure.m4 after open-mpi/ompi@846360fd4c 2016-07-06 11:59:51 +09:00
Gilles Gouaillardet
846360fd4c configury: correctly perform make distclean when {libevent,hwloc,pmix} are external components
Thanks Jeff for the guidance

Fixes open-mpi/ompi#1683

note:
in order to keep this commit easy to review, some AS_IF([...]) were replaced with
AS_IF([false], ...) or AS_IF_([true], ...)
these will be removed and re-idented in a subsequent commit
2016-07-06 11:57:24 +09:00
Ralph Castain
ee56d9dc1a Shorten the session directory name as some OS's are now providing unusually long temp directory names, causing us to overflow the sockaddr field 2016-07-05 14:59:50 -07:00
Ralph Castain
7e0af3f4f0 Update pmix2x to track upstream changes 2016-07-05 11:54:22 -07:00
Gilles Gouaillardet
267821f0dd pmix2x/pmix: fix a typo in PMIx_tool_init()
and remove now useless local variable i
2016-07-05 13:47:50 +09:00
Gilles Gouaillardet
efce8cc734 pmix2x/pmix: add missing include files
pmix cannot be built on alpine linux because of some missing includes.
uid_t and gid_t are defined in unistd.h or sys/types.h, and unistd.h
is not indirectly pulled under alpine linux, so do it manually.

Thanks N.L.K Nguyen for the report

(back-ported from upstream pmix/master@c8d55350a9)
2016-07-05 09:03:14 +09:00
Ralph Castain
c9ada8e095 Silence Coverity warnings 2016-07-03 20:45:08 -07:00
Ralph Castain
673f82e2b6 Update the PMIx listener to avoid leaking sockets into children, and better handle race condition errors 2016-07-03 08:23:33 -07:00
Nathan Hjelm
01d6da31af btl/openib: fix rdmacm locking bug
This commit fixes a long standing bug in rdmacm. It is required that
the thread that calls mca_btl_openib_endpoint_cpc_complete holds the
endpoint lock. This was not the case for rdmacm. This causes debug
builds to abort. This change also required changing
mca_btl_openib_endpoint_send_cts to require the endpoint lock to be
held when calling.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-30 15:50:07 -06:00
Nathan Hjelm
cc2b3e0c3f Merge pull request #1830 from hjelmn/rdmacm_test
Test for rdmacm hang fix
2016-06-30 10:41:46 -06:00
Nathan Hjelm
960fcd292c btl/openib: fix rdma hang
This commit is an attempt to fix a hang in finalize of rdmacm. This fixes
a path where no rdmacm client is found for an endpoint.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-29 20:31:26 -06:00
Ralph Castain
6e434d6785 Add support for PMIx tool connections and queries. Initially only support a request to list all known namespaces (jobids) from ORTE, but other folks will extend that support to include additional information
Update to match PMIx RFC

Fix configury to point to correct libevent and hwloc locations
2016-06-29 19:19:19 -07:00
Jeff Squyres
f18d6606da Merge pull request #1824 from hjelmn/rdmacm_fix
btl/openib: fix segmentation fault
2016-06-28 18:10:35 -04:00
Nathan Hjelm
8128c8eb29 btl/openib: fix segmentation fault
This commit fixes a segmentation fault that occurs if a device can be
initialized but not used. In this case the devices_count is not equal
to the number of usable devices in the devices pointer array.

Thanks to @artpol84 for tracking this down.

Fixes open-mpi/ompi#1823

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-28 10:31:32 -06:00
Nathan Hjelm
955269b4f1 Merge pull request #1816 from hjelmn/request_perfm_regression
opal/sync: fix race condition
2016-06-28 09:12:00 -06:00
Artem Polyakov
541715572f Fix MPI_Waitany and MPI_Waitsome
(request handling related)
2016-06-28 16:40:00 +03:00
Artem Polyakov
8d011ea403 Fix Mellanox copyright. 2016-06-26 21:01:19 -06:00
Nathan Hjelm
fb455f0802 opal/sync: fix race condition
This commit fixes a race condition discovered by @artpol84. The race
happens when a signalling thread decrements the sync count to 0 then
goes to sleep. If the waiting thread runs and detects the count == 0
before going to sleep on the condition variable it will destroy the
condition variable while the signalling thread is potentially still
processing the completion. The fix is to add a non-atomic member to
the sync structure that indicates another process is handling
completion. Since the member will only be set to false by the
initiating thread and the completing thread the variable does not need
to be protected. When destoying a condition variable the waiting
thread needs to wait until the singalling thread is finished.

Thanks to @artpol84 for tracking this down.

Fixes #1813

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-26 20:14:01 -06:00
Nathan Hjelm
dac9201f3b Merge pull request #1770 from hjelmn/rdma_wth
btl/openib: fix rdmacm
2016-06-24 22:46:53 -06:00
Nathan Hjelm
2992d6d238 Merge pull request #1808 from abjoshi-brcm/timer_arm64
arm64: add timer support
2016-06-23 07:10:56 -06:00
Abhishek Joshi
f06f7eb3e6 arm64: add timer support
Signed-off-by: Sreenidhi Bharathkar Ramesh <sreenidhi-bharathkar.ramesh@broadcom.com>
2016-06-23 11:01:00 +00:00
Ralph Castain
08b1438f15 Add missing PMIx range value so OPAL and PMIx align again 2016-06-22 22:03:25 -07:00
Nathan Hjelm
55d1933a89 opal/sync: fix warnings
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-22 15:03:21 -06:00
Nathan Hjelm
e4f920f6f9 opal/progress: improve performance when there are no LP callbacks
This commit adds another check to the low-priority callback
conditional that short-circuits the atomic-add if there are no
low-priority callbacks. This should improve performance in the common
case.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-22 09:52:37 -06:00
Nathan Hjelm
143a93f379 opal/sync: remove usage of OPAL_ENABLE_MULTI_THREADS
The OPAL_ENABLE_MULTI_THREADS macro is always defined as 1. This was
causing us to always use the multi-thread path for synchronization
objects. The code has been updated to use the opal_using_threads()
function. When MPI_THREAD_MULTIPLE support is disabled at build time
(2.x only) this function is a macro evaluating to false so the
compiler will optimize out the MT-path in this case. The
OPAL_ATOMIC_ADD_32 macro has been removed and replaced by the existing
OPAL_THREAD_ADD32 macro.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-06-22 09:52:37 -06:00
Gilles Gouaillardet
bf133c401e pmix2x: fix a typo in dereg_event_hdlr()
This bug has been fixed when open-mpi/ompi@dde69e1be2 was backported into upstream pmix in pmix/master@5e5577778c
but it was not fixed in open-mpi/ompi
2016-06-22 13:45:29 +09:00
Jeff Squyres
af614afedf Merge pull request #1800 from thananon/common_sym_fix
Fixed common symbol error in btl/usnic.
2016-06-21 20:11:52 -04:00
Ralph Castain
441739b5a4 Cleanup a lagging message that generates an annoying (but seemingly harmless) warning 2016-06-20 12:23:27 -07:00
Thananon Patinyasakdikul
afe07cd5d5 Fixed common symbol in btl/usnic
- This commit fixes the accidental common symbol btl_usnic_lock
- It also moves the btl_usnic_lock declaration to btl_usnic.h
2016-06-20 10:05:44 -07:00
Howard Pritchard
1bed9fdb59 Merge pull request #1799 from hppritcha/topic/help_aries_with_knl
common/ugni: help out knl with aries
2016-06-20 08:09:24 -06:00
Ralph Castain
0ba02821e6 Add requested key and job-level info 2016-06-19 18:22:31 -07:00
Ralph Castain
0a29f5cb77 Sigh - missed two typos 2016-06-18 20:57:53 -07:00
Ralph Castain
dd38cf1fed Fix typo 2016-06-18 20:56:43 -07:00
Howard Pritchard
8b53487977 common/ugni: help out knl with aries
The way the gni btl is currently coded,
it will run completely out of gas on KNL at
123 processes/node.  Since there are bound to be
those who try to run a MPI process/hyperthread
on KNL nodes, the fma sharing mode needs to be requested.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-06-18 15:09:05 -05:00
Ralph Castain
dde69e1be2 Cleanup CIDs 1362763, 1362762, 1362760, 1362759, 1362758, 1362757, 1362756, 1362755, 1362754. Unsure how to resolve 1362761.
Fixes #1792
2016-06-18 12:28:46 -07:00
Jeff Squyres
7a8d7fb948 openib: fix compiler warnings
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-06-18 07:15:11 -07:00
Jeff Squyres
c332ee5884 Merge pull request #1784 from thananon/fix_usnic_thread
Fix btl/usnic deadlock when the connectivity check is turned off.
2016-06-17 11:15:14 -04:00
Nathan Hjelm
f59c2fce6b Merge pull request #1786 from hjelmn/32_fix
opal/progress: use 32-bit atomics for call counter
2016-06-17 08:54:41 -06:00