elenash
baf32fe480
Merge pull request #308 from elenash/master
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restored _process_name_print_for_opal function in orte_init: it's requir...
2014-12-08 19:14:36 +03:00
Ralph Castain
b757b3f452
Ensure that the #nodes in the job map gets properly updated when using the sequential mapper. Provide some further diagnostic info to help understand the problem when encountered.
2014-12-08 08:03:53 -08:00
Elena
6cf3925b09
restored _process_name_print_for_opal function in orte_init: it's required for opal output from daemons which never called ompi_init so didn't set opal_process_name_print pointer
2014-12-08 13:13:35 +02:00
Ralph Castain
d6d69e2b13
Get the direct routed component to work with both TCP and USOCK OOB components. We previously had setup the direct component so it would only support direct-launched applications. Thus, all routes went direct between processes. However, if the job had been launched by mpirun, this made no sense - what you wanted instead was to have each app proc talk directly to its daemon, but have the daemons all directly connect to each other.
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So we need all the routing code for dealing with cross-job communications, lifelines, etc. The HNP will be directly connected to all daemons as they must callback at startup, and so we need to track those children correctly so we know when it is okay to terminate.
We still have to support direct launch, though, as this is the only component we can use in that scenario. So if the app doesn't have daemon URI info, then it must fall back to directly connecting to everything.
2014-12-07 09:11:48 -08:00
Ralph Castain
b1bf557024
Fix the hostfile parser so it correctly ignores binding directives that are just integers. Fix the create_dmns function so we don't hang if we can't get an error before creating the job map for an application.
2014-12-05 15:47:09 -08:00
Elena
af38a762a2
these changes fix direct routed component under mpirun; oob tcp and oob ud are working with direct routed component, but usock doesn't work with direct routed component yet.
2014-12-05 12:38:59 +02:00
Ralph Castain
c4fd6d1cde
Fix typo
2014-12-04 12:24:35 -08:00
Ralph Castain
c4002a8485
Further cleanups on the LSF integration - the affinity file is apparently always present, but simply empty if affinity wasn't set.
2014-12-04 12:24:35 -08:00
Ralph Castain
c88f181efe
Fix singleton comm-spawn, yet again. The new grpcomm collectives require a complete knowledge of every active proc in the system in case they participate in a collective. So ensure we pass the required job info when we spawn new daemons, and construct the necessary connections to allow grpcomm to operate.
2014-12-03 18:11:17 -08:00
Howard Pritchard
c67afadcfc
Merge pull request #289 from hppritcha/topic/remove_pmi
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Topic/remove pmi
2014-12-03 16:58:35 -07:00
Jeff Squyres
a3af7d6dbb
Revert "lsf configury: add dependent libraries for static linking"
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This reverts commit 56cfa90ddaaf9939926ff54b5f2f34e32254681e.
2014-12-03 13:32:56 -08:00
Jeff Squyres
92c2ff91ec
Revert "Cleanup static build requirements by adding the wrapper flags back to the component configure.m4's. Minor cleanup of the lsf configure logic."
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This reverts commit open-mpi/ompi@32bf0e7b7e .
2014-12-03 13:15:20 -08:00
Ralph Castain
54c955c92d
Fix a race condition that only appears to be affecting certain setups. The pmix.finalize function closes the file descriptor to the server, which then triggers the errhandler callback. Since the errmgr is about to be unloaded, it might be getting hit.
2014-12-03 12:19:00 -08:00
Howard Pritchard
666344a081
orte/mca/common/alps: fix configure file
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Fix configure file for alps to actually check for
alps being available.
Also include stdio.h explicitly in common_alps.c
2014-12-03 09:44:18 -07:00
Howard Pritchard
ec38aa3732
orte/mca/common: add missing Makefile.am
2014-12-03 09:44:18 -07:00
Howard Pritchard
191fe0f949
alps configury changes
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Clean up the orte_check_alps.m4. There was a little of
unnecesary stuff for handling cle 5, since it wasn't actually
doing the right thing, which would be to use pkg-config to
find dependencies both for dynamic and static linking.
Decouple the searching for alps libs, etc. from cray pmi.
Switch the alps ess and alps odls components' config files
to use the ALPS m4 macro.
alps configury fixes
Improve a check for detecting CLE release.
Improve an error message.
2014-12-03 09:44:17 -07:00
Howard Pritchard
d749077e1e
odls/alps: make sure PMI env. variables set up
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Add call to orte_odls_alps_get_rdma_creds in the
local proc launch step to obtain the Cray Rdma
credentials from the apshepherd, and to set
the PMI env. variables expected by uGNI BTL, etc.
2014-12-03 09:44:17 -07:00
Howard Pritchard
e0487e7702
orte/common/alps: add an alps common lib to orte
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Add an alps common lib to orte. Add a function
to determine whether or not a process is in a
PAGG container.
Note: we need a better naming convention for
common libs, since right now they use a "flat"
naming convention.
2014-12-03 09:44:17 -07:00
Howard Pritchard
a753c3ece0
ess/alps: add initial alps ess component
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Note this alps ess component has nothing to do
with the old CNOS alps component used on
Cray Seastar/Portals3 (Cray XT) systems.
To work properly, changes need to be made to the
open method of the ess/pmi component to keep it
from selecting, and thus initializing, the opal/pmix/cray
component.
2014-12-03 09:44:17 -07:00
Ralph Castain
32bf0e7b7e
Cleanup static build requirements by adding the wrapper flags back to the component configure.m4's. Minor cleanup of the lsf configure logic.
2014-12-03 07:14:06 -08:00
Ralph Castain
cb15cc06e1
Minor changes per Jeff's request on PR for 1.8.4
2014-12-02 19:54:10 -08:00
Ralph Castain
6294ed991b
Fix singletons - still working on singleton comm_spawn
2014-12-02 14:12:24 -08:00
Ralph Castain
14cdb04327
Revise the ess/pmi selection logic as all APPs must select it, and no daemons. Cleanup some of the mca param levels in ess so we don't printout the topology quite as easily.
2014-12-01 21:19:11 -08:00
Jeff Squyres
56cfa90dda
lsf configury: add dependent libraries for static linking
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Ensure to add the LSF dependent libraries and LD flags for the wrapper
compiler static linking case.
2014-12-01 14:59:10 -08:00
Ralph Castain
f92ccaf0f9
Add missing var declarations
2014-12-01 09:36:28 -08:00
Ralph Castain
960ef34988
Ensure the LSF ras adds the hosts to the allocation. Correctly handle the semi-colon vs comma situation in hwloc slot_lists
2014-11-30 14:37:37 -08:00
Ralph Castain
3f9d9ae8b6
Provide tighter LSF integration by correctly handling scenarios where the user has asked LSF to assign bindings. Fix a couple of typos in lex parser definitions. Tell hostfile parser to ignore binding designations in hostfiles. Add an attribute to indicate that cpusets were provided as physical cpu ids.
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Once validated, a version of this will be backported to the v1.8.4 release.
2014-11-30 11:50:31 -08:00
Elena
b17ea23ce0
fixes for direct routed component under mpirun
2014-11-26 13:36:49 +02:00
Ralph Castain
f48b9012cb
Some minor cleanup. We really don't need another peer error constant to indicate that a peer closed as we already have one for "connection failed", and that's all we really know. Update the orte constants to track their opal equivalents.
2014-11-25 08:02:29 -08:00
Nadezhda Kogteva
8dd21c7736
OOB UD: fix case when multiple oob components were specified in command line (checking of uri).
2014-11-25 11:48:11 +02:00
Gilles Gouaillardet
578fe41788
fix hangs introduced by previous commit a6744b81777ab8247908350bd15cca49bedf5208
2014-11-25 17:50:44 +09:00
Gilles Gouaillardet
a6744b8177
fix misc memory leaks specific to the master
2014-11-25 13:52:10 +09:00
Gilles Gouaillardet
38879cf682
fix misc memory leaks
2014-11-25 11:32:43 +09:00
Ralph Castain
48f702827e
First part of memory leak cleanups from Gilles
2014-11-24 16:53:33 -08:00
Ralph Castain
2e00e335b9
Add missing header to tarball. Remove stale opal_unignore
2014-11-21 17:35:11 -08:00
Howard Pritchard
6e807c4e8a
odls/alps: minor config cleanup
2014-11-21 11:09:28 -07:00
Nadezhda Kogteva
05b2eb1270
OOB UD: opal_ignore removed from oob ud component: component is compilable. Added support of new RML API, support of opal_buffer as input data. Added usage of routed component.
2014-11-20 10:20:35 +02:00
rhc54
7c0273ecb3
Merge pull request #276 from teng-lin/master
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Fixed a bug that fails to parse hostname starting with numbers.
2014-11-19 16:39:00 -08:00
Teng Lin
07ff51f43f
Fixed a bug that fails to parse hostname starting with numbers.
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According to RFC 1123, hostnames that begin with numbers are valid.
2014-11-19 16:03:55 -08:00
Howard Pritchard
9425ebefae
Be more selective about closing fd's for alps/odls
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Be more selective about closing fd's for the alps odls
component. Don't close fd's of pipes set up by the
apshepherd for providing RDMA credentials, etc.
Add an entry to the help file in case
alps_app_lli_pipes returns an error.
2014-11-19 11:21:30 -07:00
Ralph Castain
bb91517349
All other layers to register their own print-attribute functions so we can maintain pretty-print capabilities as the attributes are extended.
2014-11-19 09:37:59 -08:00
Ralph Castain
37593b232d
Add a marker for the max attr value being used by ORTE so that other, higher-levels can also use the attribute system
2014-11-19 09:37:59 -08:00
Howard Pritchard
34c156759e
fix some compiler warnings in ras/alps
2014-11-18 11:32:37 -07:00
Howard Pritchard
4df3447d96
fix compare_nodes bug in alps ras component
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There was an obvious bug in the alps/ras component compare_nodes method
which resulted in the function always evaluating the nodes
as being equivalent.
2014-11-18 11:15:02 -07:00
Howard Pritchard
ff362c16ce
add/update copyrights for alps odls component
2014-11-18 10:16:11 -07:00
Howard Pritchard
dc98b62070
add initial support for an alps odls component
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It turns out that the support for Open MPI apps on
Cray was hanging on a thin thread of support when
using the mpirun job launcher. It just happened that
with a certain set of configuration options things would
work. This is bound to backfire at some point.
To fix this weakness, as well as to allow for mpirun launched
jobs to benefit from many of the advanced placement features
provided by the Cray Linux Environment (as opposed to the hwloc
only default env of orte), a new odls alps component is introduced.
2014-11-17 14:00:09 -07:00
Ralph Castain
d9ceb5aea4
Fix C++ builds by removing no-longer-needed type declaration
2014-11-14 11:44:24 -08:00
Gilles Gouaillardet
f3b36fdf6e
orted/pmix: fix pmix_server_release when several jobids are running on the same node
2014-11-14 16:17:28 +09:00
Gilles Gouaillardet
84b21d726e
orte/util: add OPAL_{VPID,JOBID} types to orte_attr_{load,unload}
2014-11-14 15:55:25 +09:00
rhc54
1fdb6a62d3
Merge pull request #265 from miked-mellanox/topic/undeprecate_env_x
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ORTE: undeprecate -x var=val in mpirun
Looks okay to me - thanks!
2014-11-12 08:46:09 -08:00
