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Граф коммитов

92 Коммитов

Автор SHA1 Сообщение Дата
Ralph Castain
dc7f45dafd Remove the obsolete and largely unused orte_system_info structure. The only fields that were used in that struct were nodeid and nodename - these have been transferred to the orte_process_info structure.
Only one place used the user name field - session_dir, when formulating the name of the top-level directory. Accordingly, the code for getting the user's id has been moved to the session_dir code.

This commit was SVN r17926.
2008-03-23 23:10:15 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00
George Bosilca
906e8bf1d1 Replace the ompi_pointer_array with opal_pointer_array. The next step
(sometimes after the merge with the ORTE branch), the opal_pointer_array
will became the only pointer_array implementation (the orte_pointer_array
will be removed).

This commit was SVN r17007.
2007-12-21 06:02:00 +00:00
Rich Graham
27a748e7eb change all instances of ompi_free_list_init to ompi_free_list_init_new. Header
and payload data are specified separately at this stage.

This commit was SVN r16633.
2007-11-01 23:38:50 +00:00
Gleb Natapov
b0614931f4 Remove mpool_tree_item from the mpool_tree before unregistering/freeing memory.
Otherwise a race exists if another thread allocates already freed memory
which is not removed from the mpool_tree yet.

This commit was SVN r16038.
2007-09-03 10:56:55 +00:00
Gleb Natapov
091862a25a Protect access to mca_mpool_base_tree by a lock.
This commit was SVN r16011.
2007-08-30 10:51:02 +00:00
Jeff Squyres
d3f008492f Introduce a new debugging MCA parameter:
mpi_show_mpi_alloc_mem_leaks

When activated, MPI_FINALIZE displays a list of memory allocations
from MPI_ALLOC_MEM that were not freed by MPI_FREE_MEM (in each MPI
process).

 * If set to a positive integer, display only that many leaks.
 * If set to a negative integer, display all leaks.
 * If set to 0, do not show any leaks.

This commit was SVN r15736.
2007-08-01 21:33:25 +00:00
Rainer Keller
830de8ad20 - In ompi/mca/mpool/base/mpool_base_alloc.c, we may miss freeing
value..
   Actually, this string is not used anywhere else, so just have key and
   value on the stack.

This commit was SVN r15675.
2007-07-30 07:30:47 +00:00
Gleb Natapov
88f4018543 Don't fail MPI_Alloc_mem() when no more memory can be registered.
This commit was SVN r15303.
2007-07-08 11:44:58 +00:00
Brian Barrett
80fa8eef6e Don't include malloc.h in mpool/base/base.h because it causes all kinds of problems
when the memory debugging stuff is enabled.  Push it down into the two .c files
that do use it.

This commit was SVN r14779.
2007-05-27 03:55:21 +00:00
Sven Stork
22af6d38e6 - UNexport symbols that shouldn't be needed outside the libraries
- replace #if/#endif with BEGIN/END_C_DECLS
- reformating

This commit was SVN r14669.
2007-05-16 15:46:52 +00:00
Galen Shipman
db63458495 bring disable_sbrk back online, there was a change to properly support AIX
some time ago (last summer) that included checking for M_TRIM_THRESHOLD and
M_MMAP_MAX, unfortunately we didn't include <malloc.h> which is where these
are define, so disabling sbrk for the registration cache has been busted for
some time. 

This commit was SVN r14169.
2007-03-29 16:11:00 +00:00
George Bosilca
78f362d0d6 Be consistent about the definitions of mca_mpool_base_page_size and
mca_mpool_base_page_size_log. They are exported by the mpool/base/base.h,
if some other code need them, then it should include this file
instead of having it's own redefinition of these externals.

This commit was SVN r14156.
2007-03-28 14:14:05 +00:00
Sven Stork
d8a369936e - Fix more symbols that should be exported.
This commit was SVN r13824.
2007-02-27 15:17:17 +00:00
Pavel Shamis
6fe84f581b mpool_base_module_destroy was removing all modules from
a list instead of removing specific one. Fixing the bug.

This commit was SVN r13795.
2007-02-26 16:25:20 +00:00
George Bosilca
79ea6d471b Even less warnings.
This commit was SVN r13429.
2007-02-01 19:27:11 +00:00
Jeff Squyres
52ca6cf86c The mpi_leave_pinned and mpi_leave_pinned_pipeline MCA parameters were
needlessly registered in multiple different places, and none of them
had a good help string.  There was also an inconsistent check for
setting both mpi_leave_pinned and mpi_leave_pinned_pipeline (i.e., it
was only in ob1).  This commit moves the registration of these params
to one central place (ompi/runtime/ompi_mpi_params.c, with all other
mpi_* MCA params) and uses globals to propagate the values as
relevant.  The error check was also moved to the central location to
ensure that we can consistency everywhere.

This commit was SVN r13226.
2007-01-21 14:02:06 +00:00
Gleb Natapov
190e7a27cd Merge with gleb-mpool branch. All RDMA components use same mpool now (rdma).
udapl/openib/vapi/gm mpools a deprecated. rdma mpool has parameter that allows
to limit its size mpool_rdma_rcache_size_limit (default is 0 - unlimited).

This commit was SVN r12878.
2006-12-17 12:26:41 +00:00
George Bosilca
06563b5dec Last set of explicit conversions. We are now close to the zero warnings on
all platforms. The only exceptions (and I will not deal with them
anytime soon) are on Windows:
- the write functions which require the length to be an int when it's
  a size_t on all UNIX variants.
- all iovec manipulation functions where the iov_len is again an int
  when it's a size_t on most of the UNIXes.
As these only happens on Windows, so I think we're set for now :)

This commit was SVN r12215.
2006-10-20 03:57:44 +00:00
Rainer Keller
668902c780 - trivial spelling
This commit was SVN r12139.
2006-10-17 16:34:52 +00:00
George Bosilca
3f0a7cad9e The last patch for Windows support. Mostly casting and conversion to C++ friendly headers.
This commit was SVN r11400.
2006-08-24 16:38:08 +00:00
Brian Barrett
75d32b4013 * It appears that AIX provides a mallopt, but not the options to disable
sbrk and the use of mmap().  So rather than checking just for mallopt(),
  we should also be checking for those defines when determining if we can
  disable giving memory back to the OS or not.

This commit was SVN r11279.
2006-08-21 14:00:30 +00:00
Sven Stork
556d73085d - Introduce the info key "mpool" to specify which mpool to use for the
allocation. This is necessary to detect if the user requests a specific
  mpool for the allocationi. Searching the key values for a specific mpool
  name does not work for the case that the user provides an info object
  without mpool specific information (see Ticket #254).
- In the case that the user provides a info object without requesting a
  specific mpool we use malloc to allocate buffer instead of returning
  NULL (fix for Ticket #254 )

This commit was SVN r11188.
2006-08-15 09:21:40 +00:00
Brian Barrett
5cadbbbf41 Fix for bug #140. If we're leaving things pinned, certain assumptions about
where to look for registrations that were used in the alloc/free code don't
work (because the memory returned from malloc() -- whowever gets around to
calling it) might actually be registered already.  So just call malloc
and free directly and avoid the whole issue when leave pinned is on.  After
all, you have to pay the registration cost sometime, and if leave pinned
is on, you only have to pay it once.  It makes things much simpler to
have that once be at first use rather than during ALLOC_MEM, and as far
as I can read, we're still standards conformant this way.

This commit was SVN r10406.
2006-06-17 18:34:41 +00:00
George Bosilca
aca71521db Complete the move of the mpool registration from opal_list_item_t to the
ompi_free_list_item_t.

This commit was SVN r10354.
2006-06-14 17:43:50 +00:00
Galen Shipman
18dda70fd0 make ompi_free_list_item_t a class..
This will go to the 1.1 branch but will probably require a few changes as
ompi_free_list_t is different in the branch.. 

This commit was SVN r10306.
2006-06-12 16:44:00 +00:00
Brian Barrett
d3257f22d8 * back out Galen's r10300 because it breaks the build. Real fix coming RSN.
This commit was SVN r10303.

The following SVN revision numbers were found above:
  r10300 --> open-mpi/ompi@b0f3745791
2006-06-12 14:38:14 +00:00
Galen Shipman
b0f3745791 declare these as ompi_free_list_item_t's
This needs to go to 1.1

This commit was SVN r10300.
2006-06-12 13:26:15 +00:00
Galen Shipman
9d73217637 These list items are free list items, and should inherit properly..
This commit was SVN r10295.
2006-06-11 20:19:12 +00:00
Galen Shipman
08823e56fa check address before looking for the item in the tree corresponding to the
address.. 
All have been reviewed by brian.. putting in a changeset request.. 

This commit was SVN r10256.
2006-06-08 16:27:59 +00:00
Galen Shipman
636ef0cf6c don't put back null items on the list..
This commit was SVN r10253.
2006-06-08 14:46:41 +00:00
Galen Shipman
429056078a fix numerous late night errors..
1) don't need tree if memory is just malloc'd 
2) fix memory and free list leak.. 
3) deregister first and then free... doh.. 

This commit was SVN r10251.
2006-06-08 14:23:20 +00:00
Galen Shipman
5a2ceda93f a couple of stupid late night mistakes...
This commit was SVN r10250.
2006-06-08 13:39:41 +00:00
Galen Shipman
b42b0bd1af potential fix for ticket #81
Added a tree to track memory allocation from MPI_Alloc_mem, this allows us to
free the registrations in a sane fashion.. also should be faster.. 

This commit was SVN r10248.
2006-06-08 04:29:27 +00:00
Galen Shipman
deb2254c91 1. mpool_free changes to allow null registrations
2. fix for MPI_Free_mem, was calling deregister but never called mpool_free.. so
we leaked memory. Still an open issue here though, if the memory is alloc'd
and the mpool doesn't create and cache a registration, we will never find the
mpool to free with. 

This commit was SVN r9944.
2006-05-16 22:04:31 +00:00
Galen Shipman
5271948ec0 --- opal object changes
add object size to opal class
no longer need the size when allocating a new object as this is stored in
the class structure

--- dr changes 
Previous rev. maintained state on the communicator used for acking duplicate
fragments, but the communicator may be destroyed prior to successfull
delivery of an ack to the peer. We must therefore maintain this state
globally on a per peer, not a per peer, per communicator basis. 
This requires that we use a global rank on the wire and translate this as
appropriate to a local rank within the communicator. 

This commit was SVN r9454.
2006-03-29 16:19:17 +00:00
George Bosilca
dec87e2cea Remove a warning by protecting one of the variables around #if/#endif.
This commit was SVN r9409.
2006-03-24 04:43:53 +00:00
Galen Shipman
adf621fcce enable both mpool_base_use_mem_hooks and mpool_use_mem_hooks, same for
disable_sbrk. 

This commit was SVN r9385.
2006-03-23 16:15:50 +00:00
Galen Shipman
e548f5f8a8 change pml_ob1_leave_pinned_pipeline param to mpi_leave_pinned_pipeline
This commit was SVN r9384.
2006-03-23 15:57:34 +00:00
George Bosilca
4aa343990f Remove the segfault in ompi_info, when we try to destruct a not yet
constructed object.

This commit was SVN r9308.
2006-03-16 16:56:22 +00:00
George Bosilca
612570134f The request management framework has been redesigned. The main idea is
to let the PML (or io, more generally the low level request manager)
to have it's own release function (what was before the req_fini). This
function will only be called from the low level while the req_free will
be called from the upper level (MPI layer) in order to mark the request
as not used by the user anymore.

From the request point of view the requests will be marked as inactive
everytime we read their status (true for persistent as well). As 
MPI_REQUEST_NULL is already marked as inactive, the test and wait functions
are simpler. The drawback is that now we have to change in the
ompi_request_{test|wait} the req_status of the request once we get it's
status.

This commit was SVN r9290.
2006-03-15 22:53:41 +00:00
George Bosilca
4fb373c7e8 HAVE_MALLOPT is defined only when we have it. It's not a 1/0 ttype of define, it's a
defined/undefined one.

This commit was SVN r9221.
2006-03-08 22:29:01 +00:00
George Bosilca
79d25220b6 HAVE_MALLOPT is automatically detected by configure, so the correct
check is not against a value but against the define.

This commit was SVN r9126.
2006-02-23 04:30:24 +00:00
Galen Shipman
4612f70815 conditionally compile mpool_disable_sbrk if mallopt is present.
This commit was SVN r9107.
2006-02-21 22:27:41 +00:00
Galen Shipman
2b40758cf8 remove bug in turning on mem hooks automatically when leave pinned is
specified.

Turn mem hooks on automatically when sbrk is not disabled and
pml_ob1_leave_pinnned_pipeline is specified. 

This commit was SVN r9018.
2006-02-13 22:34:45 +00:00
Brian Barrett
566a050c23 Next step in the project split, mainly source code re-arranging
- move files out of toplevel include/ and etc/, moving it into the
    sub-projects
  - rather than including config headers with <project>/include, 
    have them as <project>
  - require all headers to be included with a project prefix, with
    the exception of the config headers ({opal,orte,ompi}_config.h
    mpi.h, and mpif.h)

This commit was SVN r8985.
2006-02-12 01:33:29 +00:00
Galen Shipman
1c71ab73d1 Move ompi_pointer_array initialization and destruction outside of the memory
callback, note that ompi_pointer_array_remove_all does not call free. 
This needs to go to the release branch 

This commit was SVN r8944.
2006-02-08 22:40:40 +00:00
Galen Shipman
8f8ed186f1 When leave pinned is set, only enable mem hooks if disable sbrk is not set.
This commit was SVN r8908.
2006-02-06 21:22:20 +00:00
Tim Woodall
c0d18c9579 mem hooks must be enabled if leave_pinned is set
This commit was SVN r8906.
2006-02-06 19:44:21 +00:00
Galen Shipman
1e0ea9dd6d Major fixes for the RDMA registration cache (leave_pinned).
This commit fixes issues with HPL runs on node counts > 4. 

This commit was SVN r8793.
2006-01-23 22:51:50 +00:00