ports/openmpi
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413 Коммитов

Автор SHA1 Сообщение Дата
Graham Fagg
9053790973 fixed bruck alltoall bug. now passes ibm tests 
This commit was SVN r7346.
 2005-09-13 18:35:45 +00:00
Jeff Squyres
47a1a2b7ec Arrgh. Compile *before* commit. 
Sorry folks -- stupid typo fixed.

This commit was SVN r7345.
 2005-09-13 18:12:10 +00:00
Jeff Squyres
da87169d17 Add support for MPI_IN_PLACE for the easy operations. 
This commit was SVN r7344.
 2005-09-13 18:02:36 +00:00
Tim Woodall
ee58631c82 corrections for probe/iprobe 
This commit was SVN r7342.
 2005-09-13 16:45:41 +00:00
Jeff Squyres
bbae6c3b1a Add missing header file 
This commit was SVN r7338.
 2005-09-13 12:19:34 +00:00
Graham Fagg
f354140587 Multiple changes 
-added some alltoall calls (pairwise checked ok, bruck testing)
-changes in use of data hung of communicator
-making sendrecv call a true inline function
-more use ompi_ddt routines

This commit was SVN r7337.
 2005-09-13 04:28:18 +00:00
Tim Woodall
bacc1b9122 hack to request all existing values for jobids other 
than our own - required for mpi2 dynamic processes

This commit was SVN r7336.
 2005-09-13 03:53:53 +00:00
Galen Shipman
39f25428da missing includes, perhaps related to george's work? 
This commit was SVN r7332.
 2005-09-13 02:00:28 +00:00
Galen Shipman
d932cfd342 merge of rcache work into the trunk.. lotsa fun ;-).. 
I regression tested before the merge, I will regression test tonight and
correct issues that might have crept in. 

This commit was SVN r7329.
 2005-09-12 22:28:23 +00:00
Brian Barrett
4c62c356c7 * more missing header file recovery 
This commit was SVN r7328.
 2005-09-12 22:13:09 +00:00
George Bosilca
8308ab42e9 GM depend on the proc.h now. 
This commit was SVN r7327.
 2005-09-12 21:52:44 +00:00
Brian Barrett
88cd561198 * bunch of fixes for Red Storm - missing header files and the like 
This commit was SVN r7325.
 2005-09-12 21:45:58 +00:00
Tim Woodall
304f6254e6 additional btl flags 
This commit was SVN r7324.
 2005-09-12 21:38:31 +00:00
Brian Barrett
79f7ea6856 * implement btl_put for Portals 
This commit was SVN r7320.
 2005-09-12 20:24:43 +00:00
George Bosilca
c9fb1f32f2 And more dependencies fixes. The big commit will follow shortly. 
This commit was SVN r7319.
 2005-09-12 20:22:59 +00:00
George Bosilca
fd1431bf0f Dependencies fixes. 
This commit was SVN r7318.
 2005-09-12 20:21:53 +00:00
George Bosilca
6eef57c5f2 More dependencies work. 
This commit was SVN r7317.
 2005-09-12 20:20:51 +00:00
George Bosilca
efac21256b Add some more dependencies. 
This commit was SVN r7316.
 2005-09-12 20:19:46 +00:00
George Bosilca
13f4191334 Remove the gm_config.h file as now the GM defines are in the ompi_config.h. 
Add some more header files for the next commit ... stay tuned ...

This commit was SVN r7315.
 2005-09-12 19:55:21 +00:00
George Bosilca
1b031c153b Last commit to make the threaded case compiling without warnings. Next step try to make it working ... 
Correct the spring of the vpid problem (similar to the one in the SM PTL).

Add one more argument to the MCA_BTL_SM_FIFO_WRITE macro who will get passed down to the 
MCA_BTL_SM_SIGNAL_PEER macro to allow it to have the fifo_fd file descriptor.

This commit was SVN r7305.
 2005-09-11 20:55:22 +00:00
George Bosilca
f0e4cacd4d procs[proc]->proc_name.vpid is a size_t, so try to cast it before using sprintf. 
This commit was SVN r7304.
 2005-09-11 20:52:02 +00:00
George Bosilca
f8d9f6121c Typo correction ... 
This commit was SVN r7303.
 2005-09-11 20:49:27 +00:00
George Bosilca
8b1c28e068 No more warnings for the threaded case compilation. Some of the fields have to be declared 
as volatile to make sure the compiler don't try to optimize them out. 

This commit was SVN r7302.
 2005-09-11 20:48:37 +00:00
George Bosilca
e501768f10 Sleep is defined in the unistd.h file, do not forget to include it on the dependencies list. 
This commit was SVN r7301.
 2005-09-11 20:05:17 +00:00
George Bosilca
c24eb702bb Correctly compute the default sizes for the fragments. 
This commit was SVN r7299.
 2005-09-11 20:02:55 +00:00
George Bosilca
2e3764a181 Remove the unused variable p + something that SVN figure out and where I dont see any difference, 
certainly just some conversion from TAB to space ...

This commit was SVN r7287.
 2005-09-10 04:06:49 +00:00
Graham Fagg
00842ad87c Fixed reduce bugs 
(added some temp debug routines)

This commit was SVN r7283.
 2005-09-09 23:05:17 +00:00
George Bosilca
0ad973afdd Do not modex sned and receive the proc architecture. This is now done outside the PML in the proc 
init and was added there few weeks ago by Ralph.

This commit was SVN r7282.
 2005-09-09 22:21:57 +00:00
Jeff Squyres
e8da20a6ae Fix VPATH build 
This commit was SVN r7281.
 2005-09-09 22:20:37 +00:00
Jeff Squyres
4aa75fa739 - Make opal_output_stream_t be a real opal_object_t so that it can use 
a constructor, like the rest of the code base
- Convert usage in the tree to use the constructor to zero out an
  instance of opal_output_stream_t
- Still need to re-enable output files

This commit was SVN r7253.
 2005-09-09 10:46:54 +00:00
Jeff Squyres
8ec6721f24 Prior fix for the ROMIO re-#define problem didn't really fix the 
problem because Autoconf replaced the "#undef ..." with "#define
...".  Fix this by not putting the "#undef ..." statement directly in
romioconf.h[.in] -- but rather having romioconf.h[.in] #include
romioconf-undefs.h, which has the #undef statements.

This commit was SVN r7252.
 2005-09-09 10:33:04 +00:00
Graham Fagg
9596d6e2f3 use correct names or cannot call functions... 
use correct ddt calls (and params ext vs lb etc)

This commit was SVN r7243.
 2005-09-09 02:39:57 +00:00
Galen Shipman
e2186a1cc2 Updates to the rb rcache.. 
This commit was SVN r7238.
 2005-09-08 21:34:26 +00:00
Galen Shipman
ec2b99986f remove rcache_base_init.c no longer needed.. 
This commit was SVN r7237.
 2005-09-08 16:31:17 +00:00
Jeff Squyres
e8b120fbf2 - Add some #undef's so that we don't conflict with the 
AC-automatically-generated macros
- Remove a useless #include

This commit was SVN r7228.
 2005-09-08 09:42:19 +00:00
Galen Shipman
6c8e9ab661 more rcache changes 
This commit was SVN r7227.
 2005-09-07 20:37:17 +00:00
Galen Shipman
a0b82acece Add fleshed out open,create and close 
This commit was SVN r7226.
 2005-09-07 20:21:15 +00:00
Jeff Squyres
b31c2f8e77 Remove unnecessary AM_CPPFLAGS 
This commit was SVN r7221.
 2005-09-07 18:40:56 +00:00
George Bosilca
105595bd08 Make rcache look like a component. The problem is that on MAC OS X ar is more sensitive 
than other Unix OS's and does not accept to be called with any arguments. Therefore,
we need these files in order to succesfully compile even if they are empty.

This commit was SVN r7220.
 2005-09-07 18:09:04 +00:00
George Bosilca
23cb29aefe The src directory is not used anymore but it's still present in the configure.params file. Anyway I don't think this file is used as the .h file does not exist ... 
This commit was SVN r7219.
 2005-09-07 17:16:41 +00:00
Jeff Squyres
881851604b Update the docs on the actual algorithms used 
This commit was SVN r7216.
 2005-09-07 15:46:33 +00:00
Tim Woodall
59f2462ef0 corrections/clarifications 
This commit was SVN r7215.
 2005-09-07 13:40:22 +00:00
Jeff Squyres
9302f924ea simplify the bcast code by taking abstract actions and making them 
macros -- will help with the other algorithms

This commit was SVN r7214.
 2005-09-07 13:33:43 +00:00
Tim Woodall
3e002203a0 dont need to adjust size 
This commit was SVN r7213.
 2005-09-07 13:25:05 +00:00
Brian Barrett
ed56e743b7 * update configure.ac to use the modern version of AC_INIT and 
AM_INIT_AUTOMAKE, instead of the deprecated version.
* Work around dumbness in modern AC_INIT that requires the version
  number to be set at autoconf time (instead of at configure time, as
  it was before).  Set the version number, minus the subversion r number,
  at autoconf time.  Override the internal variables to include the r
  number (if needed) at configure time.  Basically, the right thing
  should always happen.  The only place it might not is the version
  reported as part of configure --help will not have an r number.
* Since AM_INIT_AUTOMAKE taks a list of options, no need to specify
  them in all the Makefile.am files.
* Addes support for subdir-objects, meaning that object files are put
  in the directory containing source files, even if the Makefile.am is
  in another directory.  This should start making it feasible to
  reduce the number of Makefile.am files we have in the tree, which
  will greatly reduce the time to run autogen and configure.

This commit was SVN r7211.
 2005-09-07 05:54:53 +00:00
Jeff Squyres
7bab4ed269 bunches of updates 
- finally added "in use" flags -- one flag protects a set of segments
- these flags now used in bcast to protect (for example) when a
  message is so long that the root loops around the segments and has
  to re-use old segments -- now it knows that it has to wait until the
  non-root processes have finished with that set of segments before it
  can start using them
- implement allreduce as a reduce followed by a bcast (per discussion
  with rich)
- removed some redundant data on various data structures
- implemented query MCA param ("coll_sm_shared_mem_used_data") that
  tells you how much shared memory will be used for a given set of MCA
  params (e.g., number of segments, etc.).  For example:

  ompi_info --mca coll_sm_info_num_procs 4 --param coll sm | \
	    grep shared_mem_used_data

  tells you that for the default MCA param values (as of r7172), for 4
  processes, sm will use 548864 bytes of shared memory for its data
  transfer section
- remove a bunch of .c files from the Makefile.am that aren't
  implemented yet (i.e., all they do is return ERR_NOT_IMPLEMENTED)

Now on to the big Altix to test that this stuff really works...

This commit was SVN r7205.

The following SVN revision numbers were found above:
  r7172 --> open-mpi/ompi@bc72a7722b
 2005-09-06 21:41:55 +00:00
Tim Woodall
7ccc43a052 correct for btls that don't support get 
This commit was SVN r7201.
 2005-09-06 19:01:35 +00:00
Tim Woodall
a3786c4579 dont attempt to deregister if not supported 
This commit was SVN r7200.
 2005-09-06 18:27:53 +00:00
Tim Woodall
d7d717af46 correction for case where registration not supported 
This commit was SVN r7199.
 2005-09-06 18:27:07 +00:00
Galen Shipman
e5ea1b55ef fix for threaded build 
This commit was SVN r7194.
 2005-09-06 15:21:31 +00:00
Galen Shipman
a47cb00f84 fix bug in threaded build.. 
This commit was SVN r7193.
 2005-09-06 14:37:46 +00:00
Graham Fagg
b97305bbcc a few more functions (testing) 
This commit was SVN r7190.
 2005-09-06 05:21:57 +00:00
George Bosilca
5df64827c8 The MX BTL and PTL does not require the same version of the MX library. The BTL accept the 
default version while the PTL require a patched version (iwith the mx_register_match_callback function).

This commit was SVN r7188.
 2005-09-06 03:11:42 +00:00
Brian Barrett
6f19022db9 * Update Portals configuration to use --with-portals instead of 
--with-btl-portals
* Update Red Storm build config file tomatch change

This commit was SVN r7185.
 2005-09-05 21:02:50 +00:00
Galen Shipman
f541088bc3 typo broke the threaded build.. 
This commit was SVN r7182.
 2005-09-05 16:43:01 +00:00
George Bosilca
3078be40aa First stable version of the MX BTL (at least we pass NetPipe). The perfs are not amazing 
but are not that bad either.

On a 2 procs Intel(R) Xeon(TM) CPU 3.20GHz with MYRICOM Inc. Myrinet 2000 Scalable Cluster Interconnect (rev 04) I get:

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This commit was SVN r7180.
 2005-09-04 22:08:13 +00:00
Galen Shipman
1af92a1de2 tried to acquire wrong lock.. 
This commit was SVN r7177.
 2005-09-04 13:26:46 +00:00
Galen Shipman
ba9342085e Changes to support rcache in mpool 
This commit was SVN r7176.
 2005-09-04 04:20:55 +00:00
Galen Shipman
2314919b73 Initial checkin of rcache 
This commit was SVN r7174.
 2005-09-04 04:17:00 +00:00
Jeff Squyres
bc72a7722b Updates: 
- bcast now works properly for root!=0 and multi-fragment messages
- destroy mpool when communicator is destroyed
Still need to implement:
- "in use" flags for groups of fragments so that "wrapping around" in
  the data segment doesn't overwrite not-yet-read data
- ensure that shared memory isn't removed before all processes have
  finished with it (e.g., during COMM_FREE)

This commit was SVN r7172.
 2005-09-03 11:49:46 +00:00
Graham Fagg
059d7f26f8 re-enable proper freeing of allocated structures now that I know these 
are not causing an error.

This commit was SVN r7170.
 2005-09-03 06:19:17 +00:00
Graham Fagg
35447d4c32 underfilling of a only segment and the doing a PML send and esp a recv on it can 
cause flipping hard to find memory errors...

This commit was SVN r7169.
 2005-09-03 06:14:03 +00:00
Graham Fagg
36eddb6609 checkpoint 
This commit was SVN r7168.
 2005-09-03 01:41:13 +00:00
Jeff Squyres
99c3edab67 Added mca_mpool_base_module_destroy() function so that you can destroy 
an mpool module before MPI_FINALIZE (i.e., ompi_mpi_finalize())

This commit was SVN r7165.
 2005-09-03 00:07:34 +00:00
Tim Woodall
b65dc08ab1 counters need to be signed as we check for <0 
This commit was SVN r7155.
 2005-09-02 18:26:07 +00:00
Tim Woodall
dfe52fceef minor changes to thread locking 
This commit was SVN r7154.
 2005-09-02 16:27:01 +00:00
Galen Shipman
589b1b8b5a Additional changes to add_proc and tokens 
This commit was SVN r7152.
 2005-09-02 15:18:36 +00:00
Tim Woodall
4fbf7965e3 check for rdma btls when leave pinned is set 
This commit was SVN r7151.
 2005-09-02 15:04:47 +00:00
Jeff Squyres
647f6a7648 Update data structures 
This commit was SVN r7150.
 2005-09-02 14:53:14 +00:00
Jeff Squyres
6ef4805729 Tree-based barrier and broadcast seem to be working. Now on to reduce 
/ allreduce...

This commit was SVN r7149.
 2005-09-02 12:57:47 +00:00
Jeff Squyres
560f323048 Update to ensure that the macros AC_REQUIRE'd by AC_CHECK_HEADER are 
always invoked properly.

This commit was SVN r7147.
 2005-09-02 11:01:07 +00:00
Galen Shipman
a7a4da4502 Scale the SRQ based on the log base 2 of the number of peers, 
this assumes that the peers have all been added via add_procs up front. 
Bad things will happen if add_procs is called again later on a new set of
 procs to fix this we need to modify the srq which may wreck things.. looking
 into this deeper.. 

This commit was SVN r7142.
 2005-09-02 04:06:51 +00:00
Galen Shipman
c8a23106c0 More fixes for sq tokens, 
Additional work on multi-rail support. 

This commit was SVN r7139.
 2005-09-02 03:04:28 +00:00
Graham Fagg
25787c4ca7 added segmented binary 
renamed split so we know its a split binary tree
(tested, chain/bin/splitbin all pass simple and ibm tests)

This commit was SVN r7138.
 2005-09-02 02:19:59 +00:00
Graham Fagg
a7a20e1a57 corrected first seg recv for intermediate nodes (or else we lose a request) 
This commit was SVN r7137.
 2005-09-02 00:55:47 +00:00
Graham Fagg
d78e9d0e9e get/handle extent correctly 
last rank in comm is not always last in tree structure for nonzero roots

This commit was SVN r7135.
 2005-09-01 22:56:47 +00:00
Graham Fagg
f4de8776a6 ops 
This commit was SVN r7133.
 2005-09-01 17:12:28 +00:00
Tim Woodall
636ab23fdb atomic increment/test 
This commit was SVN r7130.
 2005-09-01 15:09:50 +00:00
Ralph Castain
03e45e6723 Two quick additions: 
1. Added OMPI_PROC_ARCH as a defined registry key and added the code so that the architecture info gets properly transmitted across all processes using the startup message.

2. Added an OMPI_MODEX_KEY definition and removed the hard-coded "modex" key from pml_modex_exchange

This commit was SVN r7129.
 2005-09-01 15:05:03 +00:00
Jeff Squyres
3962c53e2e - Add to AM_CPPFLAGS $(OPAL_LTDL_CPPFLAGS) where necessary in order to 
add a -I to find the included ltdl.h (vs. a system-installed ltdl.h)
- Clean up kruft in a bunch of Makefile.am's to remove now-unnecessary
  AM_CPPFLAGS settings to get static-components.h for each framework
- Move the component_repository API functions out of opal/mca/base/base.h
  and into opal/mca/base/mca_base_component_repository.h in order to
  decrease unnecessary dependencies (e.g., before this, almost
  everything in the tree depended on ltdl.h, which is unnecessary --
  only a small number of files really need ltdl.h)

This commit was SVN r7127.
 2005-09-01 12:16:36 +00:00
George Bosilca
abadd5a984 Oops typo ... 
This commit was SVN r7123.
 2005-09-01 03:41:15 +00:00
George Bosilca
414e8fabad mx_* functions return MX_* error codes ... 
This commit was SVN r7122.
 2005-09-01 03:40:48 +00:00
Galen Shipman
29f7b4deda Changed send tokens to both send/rdma tokens for both low and high priority 
queue pairs. Tested on intel p2p with 16 procs - Passed. 

This commit was SVN r7119.
 2005-09-01 02:41:44 +00:00
Ralph Castain
96f4bb7a63 Hey, sports fans!! Guess what?? 
Here's the huge registry check-in you've all been waiting for with baited breath. The revised version sends a single message to all processes at the various stage gates, thus making the startup much more scalable. I could provide you with all the tawdry details, but won't for now - you are welcome to ask, though, and I'll merrily bore your ears to tears.

In addition, the commit contains the following:

1. set the ignore properties on ompi/debuggers and orte/mca/pls/poe

2. Added simplified subscribe and put functions to the registry's API. I have also converted all of the ompi functions that registered subscriptions to the new API, and caught their associated put's as well.

In a follow-on commit, I'll be adding support for George's hetero arch registry subscription (wanted to get this one in first).

This commit was SVN r7118.
 2005-09-01 01:07:30 +00:00
Graham Fagg
4ac2445c61 Various clean ups 
Changed component so choice of decision functions controlled by mca params
(for now fixed decision functions (if statements) default)
started fixes for the various bcasts

This commit was SVN r7117.
 2005-08-31 23:38:09 +00:00
Galen Shipman
c7e9563377 Added sender side per qp send tokens to limit the number of outstanding 
sends. 

This commit was SVN r7112.
 2005-08-31 20:28:42 +00:00
Galen Shipman
4556f5bb7c Fix for multiple calls to add_procs 
This commit was SVN r7111.
 2005-08-31 19:44:28 +00:00
Galen Shipman
09873f299f Fixed a race in connection establishment.. 
This commit was SVN r7110.
 2005-08-31 19:43:22 +00:00
Graham Fagg
1caec16018 snapshot as I move machines 
do not use

This commit was SVN r7103.
 2005-08-31 01:43:48 +00:00
Tim Woodall
47b41c7081 correct regression 
This commit was SVN r7098.
 2005-08-30 19:38:56 +00:00
Galen Shipman
00e0ff729d intialize free list to rr_buf_max, report async errors to user. 
This commit was SVN r7095.
 2005-08-30 16:44:38 +00:00
Jeff Squyres
10488b717a More 0 count fixes. 
This commit was SVN r7083.
 2005-08-29 19:55:48 +00:00
Jeff Squyres
0ef7ced8f0 For items with 0 receive counts, don't try to receive. 
This commit was SVN r7082.
 2005-08-29 19:37:07 +00:00
Tim Woodall
d34e299829 correctly decrement progress_event if tcp is not being 
used so that tcp doesn't impact progress loop

This commit was SVN r7078.
 2005-08-29 17:29:58 +00:00
George Bosilca
12c09fef92 PTL GM now use the new configure system (m4 macros). 
This commit was SVN r7070.
 2005-08-28 01:38:58 +00:00
Brian Barrett
173e062fbb * Spell LIBS as LIBS not LIBX ;) 
This commit was SVN r7069.
 2005-08-27 17:38:50 +00:00
Jeff Squyres
9d6c22b0d5 Commit 2 of 2 to shorten romio component filenames: change the sym 
links from mca_io_romio_dist_* to io_romio_*

This commit was SVN r7066.
 2005-08-27 15:33:42 +00:00
Jeff Squyres
8006b1a5a8 Part 1 of 2 of a commit to reduce filenames in the romio component 
(because we kept bumping up against the max filename limit in "tar"
when making tarballs, especially if the version number got long).

This commit was SVN r7065.
 2005-08-27 15:17:25 +00:00
Tim Woodall
2a9ab3eb10 move obj construct back into open 
This commit was SVN r7057.
 2005-08-26 20:28:42 +00:00
Tim Woodall
5ed6f2c474 change flag to a sensible value 
This commit was SVN r7056.
 2005-08-26 20:21:07 +00:00