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Граф коммитов

2877 Коммитов

Автор SHA1 Сообщение Дата
Nathan Hjelm
a718743a5c opal/timer: add code to check if rtdtsc is core invariant
Newer x86 processors have a core invariant tsc. On these systems it is
safe to use the rtdtsc instruction as a monotonic timer. This commit
adds a new function to the opal timer code to check if the timer
backend is monotonic. On x86 it checks the appropriate bit and on
other architectures it parrots back the OPAL_TIMER_MONOTONIC value.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-12-16 15:11:50 -07:00
Ralph Castain
fbed2d794a Update to latest PMIx master + PTL branch
Update the usock component to disable it

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-06 20:47:44 -08:00
Ralph Castain
d51821cbc7 Update pmix check headers to support Open BSD
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-06 19:37:06 -08:00
Ralph Castain
f91f8ce494 Protect against NULL param
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-03 21:19:32 -08:00
Ralph Castain
f633d5c1b1 Initialize var
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-03 21:08:45 -08:00
rhc54
003f7d308f Merge pull request #2504 from hppritcha/topic/fix_pmix_base_help_file
pmix: Fix pmix base help file.
2016-12-03 11:57:07 -08:00
Ralph Castain
a43fae74a5 Avoid hanging in show_help if PMIx was unable to initialize
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-03 10:12:58 -08:00
Ralph Castain
a4e3f615e3 Fix executable modes of pmix config scripts
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-02 20:50:59 -08:00
Ralph Castain
342dbfcf4e Update
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-02 20:33:03 -08:00
Ralph Castain
8e64382edf Update to correct tarball
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-02 19:16:07 -08:00
Ralph Castain
1a0bccb536 Now that PMIx has settled on its release strategy and numbering, update the OPAL pmix framework to track
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-02 15:44:43 -08:00
Howard Pritchard
3049848731 Fix pmix base help file.
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-12-02 15:03:22 -06:00
Ralph Castain
6041467df0 Update to latest PMIx master
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-01 14:47:44 -08:00
Gilles Gouaillardet
3a76a78bff btl/openib: plug a memory leak in btl_openib_register_mca_params()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-12-01 14:24:30 +09:00
Gilles Gouaillardet
c9aeccb84e opal/if: open the if framework once in opal_init_util
the if framework is no more open in opal_if*, which plugs
several memory leaks

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-12-01 14:24:30 +09:00
Gilles Gouaillardet
45732fd764 hwloc/base: fix a memory leak in buffer_cleanup()
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-12-01 14:24:29 +09:00
Howard Pritchard
7ce3ca25ef Merge pull request #2458 from hppritcha/topic/pmix_cray_no_dlopen
pmix/cray: abort job if using aprun for general case
2016-11-25 14:03:20 -07:00
Howard Pritchard
eee9f7ae3a pmix/cray: abort job if using aprun for general case
It turns that there is an incompatibility between the Cray PMI
library and the default configuration for building Open MPI (master).
To work around this, we now disable use of aprun for direct launch
of Open MPI jobs except under specific conditions.

The problem is that there are now (on master) packages getting
initialized that do not work properly across a fork operation.
As part of a constructor in the Cray PMI library, a fork operation
is done to simplify use of shared memory between the
processes in a job on the same node.  This ends up thoroughly
messing up the Open MPI initialization process in the case
that dlopen support is enabled.  The initialization process gets
about half-way through when the PMIX framework is opened and
components are loaded, which triggers the Cray PMI constructor
and hence the fork operation.

There are two workarounds for this:
1) configure Open MPI for Cray XE/XC systems using aprun with the
   --disable-dlopen option
2) set the PMI_NO_FORK environment variable in the shell in which
   the aprun command is run.

Without taking these measures, a Open MPI job will just hang at
job startup in the first attempt to "thread-shift" the PMIx
fence_nb operation.  Additional hangs occur at shutdown if this
problem is worked around, again due to the insertion of a fork
operation halfway through the Open MPI initialization procedure.

This commit detects if the conditions that bring out the hang
situation are present, and if so, prints out a message and
aborts the job launch.

Note on systems using slurm, the PMI_NO_FORK environment variable
is set as part of the srun job launch, hence this issue is avoided
on those systems.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-25 06:28:19 -07:00
Gilles Gouaillardet
1a279c4ee9 btl/self: fix fragment segment length in mca_btl_self_prepare_src()
opal_convertor_pack() might pack less bytes than requested,
so always set frag->segments[0].seg_len.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-11-24 10:44:56 +09:00
Howard Pritchard
2bb4cffffd Merge pull request #2447 from hppritcha/topic/compiler_warning_swats
btl/ugni:vader swat some compiler warnings
2016-11-22 05:28:20 -07:00
Howard Pritchard
09f47fcf8e btl/ugni:vader swat some compiler warnings
Swat some compiler warnings.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-21 14:58:34 -06:00
Howard Pritchard
2cbc0e8472 pmix/cray: fix disable-dlopen problem
PR open-mpi/ompi#2432 introduced a regression where configure
and build with --disable-dlopn caused build failure owing
to unresolved alps lli symbols in the libopal-pal shared library.

This commit fixes this problem.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-21 13:45:10 -06:00
Howard Pritchard
0bbb319246 Merge pull request #2444 from hppritcha/topic/cray_pmix_ws_cleanup
pmix/cray: whitespace cleanup
2016-11-21 06:03:56 -07:00
Howard Pritchard
08dce4f161 pmix/cray: whitespace cleanup
Get rid of tabs.  This is anti-ompi style.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-18 19:30:40 -07:00
Howard Pritchard
44f4663d0d Merge pull request #2432 from hppritcha/topic/fix_info_etc_w_alps
pmix/cray: set some envars for MPI_INFO_ENV object
2016-11-18 14:23:53 -07:00
Howard Pritchard
de3de131af pmix/cray: set some envars for MPI_INFO_ENV object
Enhance the cray pmix component to set some OMPI internal
env. variables used to set some key/value pairs
on the MPI_INFO_ENV object.  This allows more of the
ompi-tests ibm unit tests to pass when using aprun/srun
direct launch and Cray PMI.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-16 17:37:52 -06:00
Joshua Ladd
4907085c6f Add the ConnectX-5 device ID to openib BTL.
Signed-off-by: Joshua Ladd <jladd.mlnx@gmail.com>
2016-11-16 21:42:37 +02:00
Gilles Gouaillardet
8ef538adeb Merge pull request #2398 from bosilca/topic/tcp_endpoints_mutex
Protect the tcp_endpoints list from concurrent accesses.
2016-11-14 22:13:29 -07:00
Howard Pritchard
703b464c03 pmix: fix a typo in a help file
Fixes #2391

Thanks to @njoly for reporting

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2016-11-12 11:49:15 -07:00
George Bosilca
d0dddef53d
Protect the tcp_endpoints list from concurrent accesses.
Thanks Gilles for your help.

Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2016-11-11 00:06:03 -05:00
Gilles Gouaillardet
a49422fe84 btl/tcp: get rid of the MCA_BTL_TCP_SUPPORT_PROGRESS_THREAD macro
since pthreads are now mandatory, the MCA_BTL_TCP_SUPPORT_PROGRESS_THREAD
is always true and hence can be safely removed

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-11-08 14:00:05 +09:00
Aboorva Devarajan
fb8e074583 powerpc: Add support for powerpcle in timer/pstat.
Signed-off-by: Aboorva Devarajan <abodevar@in.ibm.com>
2016-11-07 02:35:44 -05:00
Gilles Gouaillardet
7a2894f1e0 event/libevent2022: cleanup dependencies to the embedded libevent lib
configury force event/libevent2022 to be built as a static module,
so simplify Makefile.am

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-11-07 14:57:52 +09:00
Gilles Gouaillardet
6f7ed1f552 event/libevent2022: add missing dependencies to the embedded libevent lib
force the libevent2022 component rebuild if the embedded libevent is updated

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-11-04 11:13:44 +09:00
Jeff Squyres
a4ffa590c8 Merge pull request #2308 from hjelmn/vader_mem
btl/vader: reduce memory footprint when using xpmem
2016-11-02 10:28:26 -04:00
Steve Wise
7050969d47 openib btl: remove BTL_OPENIB_FAILOVER_ENABLED code
Remove BTL_OPENIB_FAILOVER_ENABLED code in the openib btl source.

Remove the failover-specific files from the openib btl.

Update the openib/Makefile.am accordingly.

Remove the -enable-openib-failover config logic.

Signed-off-by: Steve Wise <swise@opengridcomputing.com>
2016-11-01 14:45:36 -07:00
Ralph Castain
64873487b4 Remove the max_connections parameter from the radix component as it is confusing. Modify PMIx client init so that it simply returns the nspace/rank if called by a server - this allows the server to retrieve its assigned ID. Register the server's nspace so client-side operations can succeed
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-11-01 12:17:11 -07:00
Jeff Squyres
149b660666 btl/usnic: fix compiler warning
Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2016-10-28 07:36:20 -07:00
rhc54
698dac108b Merge pull request #2309 from rhc54/topic/pmix
Update to latest PMIx master - mostly updates example codes, but incl…
2016-10-27 14:21:46 -07:00
Ralph Castain
f4a55118e6 Update to latest PMIx master - mostly updates example codes, but includes one critical cleanup during finalize.
NOTE: set dstore shared memory storage option to "on" by default

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-10-27 11:16:03 -07:00
Nathan Hjelm
9d92075e60 btl/self: rewrite to decrease memory usage (#2307)
This commit rewrites much of the btl/self component to fix a long
standing memory usage bug. Before this commit the prepare_src path
would always allocate a max send fragment (256kB). This caused the
rank to allocate 32 * 256k useless buffers from one send. This commit
makes the following changes:

 - Add the MCA_BTL_FLAGS_GET flag by default. No reason not to set it.

 - Reduce the eager limit, max send size, buffers per allocation, and
   maximum buffer count per fragment size. These changes should have
   no noticible affect on performance but should greatly reduce the
   memory usage of the component.

 - Implement the sendi function. This should reduce self send latency
   somewhat.

 - Rewrite prepare_src to never allocate a eager or max send fragment
   for contiguous data.

 - add_procs needs to return something in the peer array for the proc
   self not just set the reachability bit. Now stores (void *) 1.

 - Various cleanups. Removed and unused file.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-10-27 12:34:54 -04:00
Nathan Hjelm
a652a193ea btl/vader: reduce memory footprint when using xpmem
The vader btl kept a per-peer registration cache to keep track of
attachments. This is not really a problem with small numbers of local
ranks but can be a problem with large SMP machines. To reduce the
footprint there is now one registration cache for all xpmem
attachments. This will probably increase the lookup time for large
transfers but is a worthwhile trade-off.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2016-10-27 10:09:43 -06:00
Ralph Castain
f298f294e1 Update PMIx to latest master tarball. Ensure we set the HNP name for orted's so that PMIx_Lookup can find the server
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-10-26 15:48:56 -07:00
Gilles Gouaillardet
f2a80dc09f configury: check libnl version and abort in case of conflict
libnl and libnl-3 are known to conflict with each other, so detect
and abort if these two libs are both used directly (e.g. Open MPI
uses libnl-3) or indirectly (e.g. libibverbs.so might depend on libnl)
2016-10-25 09:23:59 +09:00
Ralph Castain
649301a3a2 Revise the routed framework to be multi-select so it can support the new conduit system. Update all calls to rml.send* to the new syntax. Define an orte_mgmt_conduit for admin and IOF messages, and an orte_coll_conduit for all collective operations (e.g., xcast, modex, and barrier).
Still not completely done as we need a better way of tracking the routed module being used down in the OOB - e.g., when a peer drops connection, we want to remove that route from all conduits that (a) use the OOB and (b) are routed, but we don't want to remove it from an OFI conduit.
2016-10-23 21:52:39 -07:00
rhc54
900ae15d49 Merge pull request #2221 from bharatpotnuri/master
btl/openib: remove unwanted ompi header inclusion in opal code.
2016-10-21 14:05:55 -05:00
Ralph Castain
9131eca9c6 Update to latest PMIx master 2016-10-20 21:13:40 -07:00
Ralph Castain
be3197fe27 Ensure that the libevent headers are installed for external libevent when --with-devel-headers is given. Correct the path for opal_config.h in the external hwloc header 2016-10-20 20:57:50 -07:00
Ralph Castain
2f966bf3bf Cleanup external PMIx v3 component for copy/paste errors - component and module require unique names 2016-10-20 09:11:46 -07:00
Ralph Castain
8113a8d1b0 Now that we are hiding symbols in the internal PMIx component, we cannot reuse that component for integration to the external PMIx master as the symbols don't match. So create a new "ext3x" component and copy the PMIx v3 integration over there.
Also, remove a couple of build-product files from the pmix3x component.
2016-10-18 13:15:32 -07:00