ports/openmpi
ports/openmpi
1
1
Форкнуть 0
Код Релизы Активность
25 747 коммитов 3 Ветки 0 Теги
Граф коммитов

6085 Коммитов

Автор SHA1 Сообщение Дата
Thananon Patinyasakdikul
23b27c510c romio: make romio use internal opal_random instead of rand(3). 
This fixes issue #1877
 2016-08-05 09:04:52 -07:00
Howard Pritchard
ff669e7b15 code cleanup: clang is now a happier panda 
Clang 5.1 on my mac was a sad panda compiling a couple
of files,  complaining about uninitialized stack variables.

This commit makes clang a happier panda (or at least not so sad).

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2016-08-04 19:34:44 -06:00
Edgar Gabriel
9c3180160c io/ompio: Add barrier to file_close and to file_set_size 
This fixes a bug reported on the mailing for ompio.
https://www.open-mpi.org/community/lists/users/2016/05/29333.php
 2016-08-04 11:20:31 -05:00
Gilles Gouaillardet
60e91e890a coll/base: give a boost to ompi_coll_base_sendrecv_nonzero_actual() 
Based on current implementation it is faster to use a blocking
send than the non-blocking version. Switch the exchange function
used in the barrier to use the blocking version combined with
the non-blocking version of the receive.

This is similar to open-mpi/ompi@223d75595d
 2016-08-04 13:31:07 +09:00
Nathan Hjelm
11c853d05e osc/pt2pt: do not set rdma_frag after start 
It is possible for the start call to complete the requests. For this
reason the module rdma_frag field should be filled in before start is
called. If the request completes the completion callback will reset
the rdma_frag field to NULL. Fixes a bug discovered by @tkordenbrock.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-08-03 15:20:36 -06:00
Nathan Hjelm
889dd32806 pml/ob1: reset req_bytes_packed on start 
On start we were not correctly resetting all request fields. This was
leading to a double-completion on persistent receives. This commit
updates the base start code to reset the receive req_bytes_packed and
the send request convertor.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2016-08-03 11:29:30 -06:00
Edgar Gabriel
aa7e852e44 common/ompio: files are only compiled in case MPI I/O is requested 
fixes: open-mpi/ompi#1932
 2016-08-02 15:01:38 -05:00
Edgar Gabriel
19fe5cac50 io/ompio: next step in code-reorganization 
- move the sort_iovec operations to fcoll/base
 - move set_view_internal to common/ompio
 - move set_file_default to common/ompio
 - remove io_ompio_sort, not used anymore.
 2016-08-02 09:18:29 -05:00
Gilles Gouaillardet
917d96ba50 coll/libnbc: cleanup handling of the second temporary buffer in ireduce 2016-08-02 16:32:15 +09:00
Gilles Gouaillardet
ed9139ca13 coll/libnbc: correctly handle datatype alignment when allocating two buffers at once 2016-08-02 15:44:12 +09:00
Edgar Gabriel
c0bd8728fd io/ompio: move aggregator selection code to a separate file 
- move all functions related to aggregator selection to a single file
- perform code cleanup fixing many Coverty complains along the way.
 2016-08-01 14:04:27 -05:00
Edgar Gabriel
160d9a78c1 Merge pull request #1886 from edgargabriel/pr/ompio-reorg 
io/ompio: move io/ompio functionality to common/ompio
 2016-07-29 12:24:21 -05:00
Joshua Ladd
4a03a657c6 Merge pull request #1913 from vspetrov/hcoll_derived_datatypes 
coll/hcoll mpi datatypes support
 2016-07-29 10:08:23 -04:00
Nathan Hjelm
1da558407c Merge pull request #1911 from hjelmn/threads 
opal/thread: clean up and add additional OPAL_THREAD macros
 2016-07-29 06:44:11 -06:00
Valentin Petrov
3582bba6b7 coll/hcoll mpi datatypes support 2016-07-29 10:06:39 +03:00
Howard Pritchard
5ff6b81eee Merge pull request #1871 from hppritcha/topic/ofi_mtl_params 
mtl/ofi: add some more mca parameters
 2016-07-28 18:21:23 -06:00
Nathan Hjelm
aac611237b opal/thread: clean up and add additional OPAL_THREAD macros 
This commit expands the OPAL_THREAD macros to include 32- and 64-bit
atomic swap. Additionally, macro declararations have been updated to
include both OPAL_THREAD_* and OPAL_ATOMIC_*. Before this commit the
former was used with add and the later with cmpset.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
 2016-07-28 09:23:14 -06:00
Howard Pritchard
22c8743557 mtl/ofi: add some more mca parameters 
allow for toggling of both control/data progress models.
allow for using FI_AV_TABLE or FI_AV_MAP for av type.

Signed-off-by: Howard Pritchard <howardp@lanl.gov>
 2016-07-28 02:35:09 -06:00
Gilles Gouaillardet
a0a999e63d coll/base: fix ompi_coll_base_allgatherv_intra_basic_default() with MPI_IN_PLACE 2016-07-28 13:57:18 +09:00
Gilles Gouaillardet
b8a1ffb87e coll/base: fix ompi_coll_base_allgatherv_intra_basic_default() 
Fixes open-mpi/ompi#1907
 2016-07-28 13:50:04 +09:00
Pascal Deveze
10763f5abc mtl/portals4: Take into account the limitation of portals4 (max_msg_size) and split messages if necessary 2016-07-26 08:44:07 +02:00
Pascal Deveze
724801b018 mtl-portals4: Introduce a "short_limit" for the short message size. "eager_limit" will only be used for 
the limit of the eager part of the messages sent with the rndv protocol
 2016-07-26 08:43:24 +02:00
Pascal Deveze
9e58b4842f mtl-portals4: Correct how the request_status._ucount is set 2016-07-26 08:42:48 +02:00
Pascal Deveze
3ca194f10a mtl-portals4: Store ptl_process_id (from PtlGetPhysId) and display it. 2016-07-26 08:42:08 +02:00
Pascal Deveze
bd3b1cf7be mtl-portals4: Control that flowctl_idx is egal to REQ_FLOWCTL_TABLE_ID 
and use OPAL_ATOMIC_CMPSET_32 to test and set flowctl_active flag to true
 2016-07-26 08:41:31 +02:00
Ralph Castain
9ab20cafe3 Pass the nodeid for each proc in the job. Fix a mistaken error output message 2016-07-25 15:41:15 -07:00
Edgar Gabriel
b0fa1fd2a1 move the internal file_open/close functions to common/ompio 2016-07-21 13:08:32 -05:00
Edgar Gabriel
ccf76b7791 moving the internal read/write functions to common/ompio 
and update all fs/fcoll/sharedfp components to use these functions.
 2016-07-21 13:08:32 -05:00
Edgar Gabriel
688710d408 make common/ompio compile 2016-07-21 13:08:32 -05:00
Edgar Gabriel
39ae93b87b modify the fcoll components to use the common/ompio print queues 2016-07-21 13:08:32 -05:00
Edgar Gabriel
fe17410943 next step in making the print_queue functionality move to common/ompio 2016-07-21 13:08:32 -05:00
Edgar Gabriel
af67c8f239 first cut on moving some ompio functionality to common/ompio 2016-07-21 13:08:32 -05:00
Edgar Gabriel
a899c0fb38 fcoll/static: fix coverty warnings 
fix coverty warnings CID 72144, CID 710677, CID 1364164
 2016-07-21 13:08:15 -05:00
Pascal Deveze
a7e3de6c4f coll-portals4: No more messages passed to Portals4 bigger than the limit given by PtlNIInit 2016-07-21 15:58:20 +02:00
Pascal Deveze
175e6aa385 coll-portals4: Before calling PtlCTWait, call PtlTriggeredInc twice so be sure all pending PtlTriggredPut are triggered 2016-07-21 15:58:20 +02:00
Pascal Deveze
df59d6cdd4 coll-portals4: Correct and simplify how the data are cut in segment_nb segments (bcast) 2016-07-21 15:58:09 +02:00
Pascal Deveze
274f8d608c coll-portals4: Change output format and change variable names (minor changes). 2016-07-21 11:06:45 +02:00
Todd Kordenbrock
37ad6aa711 Merge pull request #1853 from PDeveze/Patchs-on-osc-portals4 
Patchs on osc portals4
 2016-07-20 09:22:19 -05:00
Todd Kordenbrock
210534adb3 Merge pull request #1850 from PDeveze/Patchs-on-mtl-portals4 
Patchs on mtl portals4
 2016-07-20 08:21:03 -05:00
Pascal Deveze
9cac32ba6a mtl/portals4: Modifications concerning the short message management 2016-07-19 11:21:50 +02:00
Pascal Deveze
49e9936914 mtl/portals4: Some little patches 2016-07-19 11:18:55 +02:00
Pascal Deveze
f19a2b961c osc/portals4: Correct an error in an if statement 2016-07-18 13:16:12 +02:00
Pascal Deveze
81823d7a63 osc/portals4: Store the no_locks parameter in osc_portals4_component.no_locks 2016-07-18 11:51:52 +02:00
Pascal Deveze
76b38651da osc/portals4: For the contiguous datatype, take into account the lower bound before calling portals4 2016-07-18 11:20:50 +02:00
Pascal Deveze
7aaf16e7fe osc/portals4: Put/Get splitting because Portals4 may restrict sizes 2016-07-18 10:49:28 +02:00
Pascal Deveze
025201b459 osc/portals4: set the initial value of req_status.MPI_ERROR to MPI_SUCCESS 2016-07-18 09:52:56 +02:00
Pascal Deveze
aa0d687a0a osc/portals4: Display an ouput message if ompi_osc_portals4_get_dt() or ompi_osc_portals4_get_op() returns an error 2016-07-18 09:52:56 +02:00
Pascal Deveze
c4181909a4 osc/portals4: Be sure that the ME are operationnal (wait for the PTL_EVENT_LINK) 2016-07-18 09:52:56 +02:00
Pascal Deveze
e99e7d08ed osc/portals4: For the ME, use the uid from PtlGetUid instead of PTL_UID_ANY 2016-07-18 09:52:56 +02:00
Pascal Deveze
56b36eeb7e osc/portals4: Format of "target_disp" is OPAL_PTRDIFF_TYPE and %lu is the appropriate format to display it. 2016-07-18 09:52:55 +02:00