This commit updates osc/pt2pt to allocate peer object as they are
needed rather than all at once. Additionally, to help improve the
memory footprint a new synchronization structure has been added.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
- MPI_Compare_and_swap
- MPI_Fetch_and_op
- MPI_Raccumulate
- MPI_Win_detach
Thanks to Michael Knobloch and Takahiro Kawashima for bringing this
to our attention
This commit fixes a bug identified by MTT that occurred when mixing
passive and active target synchronization. The bugs fixed in this
commit are:
- Do not update incoming fragment counts for any type of unbuffered
control message. These messages are out-of-band and should not be
considered towards the signal counts.
- Complete a change from using received counts to expected counts for
lock, unlock, and flush acks. Part of the change made it into
master before the rest was ready. This was preventing wakeups in
some cases.
- Turn the passive_target_access_epoch module member into a
counter. As long as at least one peer is locked we are in a
passive-target epoch and not an active target one. This fix will
ensure that fragment flags are set appropriately.
fixes#538
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
The fragment flush code tries to send the active fragment before
sending any queued fragments. This could cause osc messages to arrive
out-of-order at the target (bad). Ensure ordering by alway sending
the active fragment after sending queued fragments.
This commit also fixes a bug when a synchronization message (unlock,
flush, complete) can not be packed at the end of an existing active
fragment. In this case the source process will end up sending 1 more
fragment than claimed in the synchronization message. To fix the issue
a check has been added that fixes the fragment count if this situation
is detected.
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Use of the old ompi_free_list_t and ompi_free_list_item_t is
deprecated. These classes will be removed in a future commit.
This commit updates the entire code base to use opal_free_list_t and
opal_free_list_item_t.
Notes:
OMPI_FREE_LIST_*_MT -> opal_free_list_* (uses opal_using_threads ())
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
Features:
- Support for an override parameter file (openmpi-mca-param-override.conf).
Variable values in this file can not be overridden by any file or environment
value.
- Support for boolean, unsigned, and unsigned long long variables.
- Support for true/false values.
- Support for enumerations on integer variables.
- Support for MPIT scope, verbosity, and binding.
- Support for command line source.
- Support for setting variable source via the environment using
OMPI_MCA_SOURCE_<var name>=source (either command or file:filename)
- Cleaner API.
- Support for variable groups (equivalent to MPIT categories).
Notes:
- Variables must be created with a backing store (char **, int *, or bool *)
that must live at least as long as the variable.
- Creating a variable with the MCA_BASE_VAR_FLAG_SETTABLE enables the use of
mca_base_var_set_value() to change the value.
- String values are duplicated when the variable is registered. It is up to
the caller to free the original value if necessary. The new value will be
freed by the mca_base_var system and must not be freed by the user.
- Variables with constant scope may not be settable.
- Variable groups (and all associated variables) are deregistered when the
component is closed or the component repository item is freed. This
prevents a segmentation fault from accessing a variable after its component
is unloaded.
- After some discussion we decided we should remove the automatic registration
of component priority variables. Few component actually made use of this
feature.
- The enumerator interface was updated to be general enough to handle
future uses of the interface.
- The code to generate ompi_info output has been moved into the MCA variable
system. See mca_base_var_dump().
opal: update core and components to mca_base_var system
orte: update core and components to mca_base_var system
ompi: update core and components to mca_base_var system
This commit also modifies the rmaps framework. The following variables were
moved from ppr and lama: rmaps_base_pernode, rmaps_base_n_pernode,
rmaps_base_n_persocket. Both lama and ppr create synonyms for these variables.
This commit was SVN r28236.
request completion callback
* Use the completion callback pointer to remove all need for opal_progress
calls in the one-sided layer
This commit was SVN r24848.
This is a fairly intrusive change, but outside of the moving of opal/event to opal/mca/event, the only changes involved (a) changing all calls to opal_event functions to reflect the new framework instead, and (b) ensuring that all opal_event_t objects are properly constructed since they are now true opal_objects.
Note: Shiqing has just returned from vacation and has not yet had a chance to complete the Windows integration. Thus, this commit almost certainly breaks Windows support on the trunk. However, I want this to have a chance to soak for as long as possible before I become less available a week from today (going to be at a class for 5 days, and thus will only be sparingly available) so we can find and fix any problems.
Biggest change is moving the libevent code from opal/event to a new opal/mca/event framework. This was done to make it much easier to update libevent in the future. New versions can be inserted as a new component and tested in parallel with the current version until validated, then we can remove the earlier version if we so choose. This is a statically built framework ala installdirs, so only one component will build at a time. There is no selection logic - the sole compiled component simply loads its function pointers into the opal_event struct.
I have gone thru the code base and converted all the libevent calls I could find. However, I cannot compile nor test every environment. It is therefore quite likely that errors remain in the system. Please keep an eye open for two things:
1. compile-time errors: these will be obvious as calls to the old functions (e.g., opal_evtimer_new) must be replaced by the new framework APIs (e.g., opal_event.evtimer_new)
2. run-time errors: these will likely show up as segfaults due to missing constructors on opal_event_t objects. It appears that it became a typical practice for people to "init" an opal_event_t by simply using memset to zero it out. This will no longer work - you must either OBJ_NEW or OBJ_CONSTRUCT an opal_event_t. I tried to catch these cases, but may have missed some. Believe me, you'll know when you hit it.
There is also the issue of the new libevent "no recursion" behavior. As I described on a recent email, we will have to discuss this and figure out what, if anything, we need to do.
This commit was SVN r23925.
operations, not ints.
Sorry for the mid-day configure.ac change, folks...
This commit was SVN r23449.
The following Trac tickets were found above:
Ticket 2472 --> https://svn.open-mpi.org/trac/ompi/ticket/2472
OMPI_* to OPAL_*. This allows opal layer to be used more independent
from the whole of ompi.
NOTE: 9 "svn mv" operations immediately follow this commit.
This commit was SVN r21180.
- Delete unnecessary header files using
contrib/check_unnecessary_headers.sh after applying
patches, that include headers, being "lost" due to
inclusion in one of the now deleted headers...
In total 817 files are touched.
In ompi/mpi/c/ header files are moved up into the actual c-file,
where necessary (these are the only additional #include),
otherwise it is only deletions of #include (apart from the above
additions required due to notifier...)
- To get different MCAs (OpenIB, TM, ALPS), an earlier version was
successfully compiled (yesterday) on:
Linux locally using intel-11, gcc-4.3.2 and gcc-SVN + warnings enabled
Smoky cluster (x86-64 running Linux) using PGI-8.0.2 + warnings enabled
Lens cluster (x86-64 running Linux) using Pathscale-3.2 + warnings enabled
This commit was SVN r21096.
get bitten by header depending on having already included
the corresponding [opal|orte|ompi]_config.h header.
When separating, things like [OPAL|ORTE|OMPI]_DECLSPEC
are missed.
Script to add the corresponding header in front of all following
(taking care of possible #ifdef HAVE_...)
- Including some minor cleanups to
- ompi/group/group.h -- include _after_ #ifndef OMPI_GROUP_H
- ompi/mca/btl/btl.h -- nclude _after_ #ifndef MCA_BTL_H
- ompi/mca/crcp/bkmrk/crcp_bkmrk_btl.c -- still no need for
orte/util/output.h
- ompi/mca/pml/dr/pml_dr_recvreq.c -- no need for mpool.h
- ompi/mca/btl/btl.h -- reorder to fit
- ompi/mca/bml/bml.h -- reorder to fit
- ompi/runtime/ompi_mpi_finalize.c -- reorder to fit
- ompi/request/request.h -- additionally need ompi/constants.h
- Tested on linux/x86-64
This commit was SVN r20720.
* Remove unused declaration
* remove unused variable warning when not using progress threads
* If we're using progress threads, we want to lock, not trylock
when in progress, since it was called from the wakeup thread
and not the progress function
This commit was SVN r14739.
to do while(...) { } then we can't change the variables in the ...
atomically, but should do it while holding the module lock.
* Fix dumb communicator creation error when we don't create the progress
stuff (because a window already exists), where we would accidently
jump to the error case.
This commit was SVN r14715.
* Combine polling of the long requests and buffer requests into
one type, and in one place
* Associate the list of requests to poll with the component, not
the individual modules
* add progress thread that sits on the OMPI request structure
and wakes up at the appropriate time to poll the message
list. Not the best, but without some asynch notification
from the PML that a given set of requests has completed, there
isn't much better
* Instead of calling opal_progress() all over the place, move
to using the condition variables like the rest of the project.
Has the advantage of moving it slightly futher along in the
becoming thread safe thing
* Fix a problem with the passive side of unlock where it could
go recursive and cause all kinds of problems, especially
when progress threads are used. Instead, have two parts of
passive unlock -- one to start the unlock, and another to
complete the lock and send the ack back. The data moving
code trips the second at the right time.
This commit was SVN r14703.
Otherwise, we end up recursively calling into the progress functions
and corrupting a list that doesn't like to be corrupted.
Refs trac:561
This commit was SVN r13138.
The following Trac tickets were found above:
Ticket 561 --> https://svn.open-mpi.org/trac/ompi/ticket/561
* Fix a counter roll-over issue that could result from a large (but
not excessive) number of outstanding put/get/accumulate calls
during a single synchronization issues (Refs trac:506)
* Fix epoch issue with rdma component that would effect PWSC
synchronization (Refs trac:507)
This commit was SVN r12673.
The following Trac tickets were found above:
Ticket 506 --> https://svn.open-mpi.org/trac/ompi/ticket/506
Ticket 507 --> https://svn.open-mpi.org/trac/ompi/ticket/507
* use one-sided datatype check instead of send/receive and check both
the origin and target datatypes
* allow error handler to be set on MPI_WIN_NULL, per standard
* Allow recursive calls into the pt2pt osc component's progress
function
* Fix an uninitialized variable problem in the unlock header
This commit was SVN r12667.
tell if the remote proc should be in an exposure epoch or not.
Refs trac:325
This commit was SVN r11746.
The following Trac tickets were found above:
Ticket 325 --> https://svn.open-mpi.org/trac/ompi/ticket/325
epoch's control data could overwrite the previous epoch's data because
we were reusing data structures between PW and SC. Instead, we now
have explicit post_msg and complete_msg counters for completion.
refs trac:354
* Only register the rdma osc callback once, as it turns out that some
btls (MX) do somethng more than update a table during the register
call, and each register call sucks up valuable fragments...
This commit was SVN r11745.
The following Trac tickets were found above:
Ticket 354 --> https://svn.open-mpi.org/trac/ompi/ticket/354
implemented entirely on top of the PML. This allows us to have a
one-sided interface even when we are using the CM PML and MTLs for
point-to-point transport (and therefore not using the BML/BTLs)
* Old pt2pt component was renamed "rdma", as it will soon be having
real RDMA support added to it.
Work was done in a temporary branch. Commit is the result of the
merge command:
svn merge -r10862:11099 https://svn.open-mpi.org/svn/ompi/tmp/bwb-osc-pt2pt
This commit was SVN r11100.
The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
r10862
r11099
default
* Add ability to start Put and Get requests immediately instead of queuing
until synchronizaion when using Fence. Not entirely sure this is
completely safe, so it must be explicitly enabled by the user, either with
an MCA parameter or info argument to Win_create.
This commit was SVN r9418.
* Implement win_lock and win_unlock in the pt2pt component. Not well
tested, but appears to move bits if properly motivated...
This commit was SVN r8922.
* rework the thread locking so that it at least makes sense to me. Still
need to do a bunch of testing before I'm happy with it, but it's a tad
bit closer...
This commit was SVN r8918.
* Implement fortran handle -> c handle tracking
* Remove some unneeded locking around free lists (the free list
macros do their own locking)
* Try to be a bit more memory friendly with the w_mode setting /
checking
This commit was SVN r8865.
complete, but stable enough that it will have no impact on general development,
so into the trunk it goes. Changes in this commit include:
- Remove the --with option for disabling MPI-2 onesided support. It
complicated code, and has no real reason for existing
- add a framework osc (OneSided Communication) for encapsulating
all the MPI-2 onesided functionality
- Modify the MPI interface functions for the MPI-2 onesided chapter
to properly call the underlying framework and do the required
error checking
- Created an osc component pt2pt, which is layered over the BML/BTL
for communication (although it also uses the PML for long message
transfers). Currently, all support functions, all communication
functions (Put, Get, Accumulate), and the Fence synchronization
function are implemented. The PWSC active synchronization
functions and Lock/Unlock passive synchronization functions are
still not implemented
This commit was SVN r8836.
