got a whole lot smaller, decreasing the memory footprint of the
running application. How much it's a good question. Here is a
breakdown:
- in mca_bml_base_endpoint_t: 3 *size_t + 1 * uint32_t
- in mca_bml_base_btl_t: 1 * int + 1 * double - 1 * float
+ 6 * size_t + 9 * (void*)
The decrease in mca_bml_base_endpoint_t is for each peer and the
decrease in mca_bml_base_btl_t is for each BTL for each peer.
So, if we consider the most convenient case where there is only
one network between all peers, this decrease the memory foot print
per peer by
9*size_t + 9*(void*) + 2 * int32_t + 1 * double - 1 * float.
On a 64 bits machine this will be 156 bytes per peer.
Now we access all these fields directly from the underlying BTL
structure, and as this structure is common to multiple BML endpoint,
we are a lot more cache friendly. Even if this do not improve the
latency, it makes the SM performance graph a lot smoother.
This commit was SVN r19659.
There was an argument that was barely used, and on return at the PML
level it contained nothing usable. It has been removed, so now we're
using less memory ...
This commit was SVN r19657.
(related to the presence of posix threads and ptmalloc2) is now a
little outdated: since we don't build ptmalloc2 as part of libopal
anymore, the openib BTL's requirements are not directly tied to
ptmalloc2's anymore. Specifically, I altered the test to:
1. At compile time, if no threads are found, the ptmalloc2 component
is going to be built, '''and the ptmalloc2 component is going to be
inside libopal,''' then refuse to build the openib BTL.
1. At run time, if no threads were available at compile time and the
ptmalloc2 component is part of the process, then refuse to use the
openib BTL.
Fixes trac:1537.
This commit was SVN r19652.
The following Trac tickets were found above:
Ticket 1537 --> https://svn.open-mpi.org/trac/ompi/ticket/1537
always in a heterogeneous way in order to be able to support extern32. It
doesn't really matter as it is outside the critical path.
This commit was SVN r19651.
Rationale:
1. This value has already changed since v1.2 (v1.2 MPI_MAX_PORT_NAME
== 36). Hence, this commit simply increases the value from a
previous change.
1. The changes does increase OMPI's memory footprint slightly, but
only when using MPI-2 dynamics. So it is expected that the change
will have minimal impact on the overall footprint.
1. The change is helpful for nodes that have 4 or more IP networks
(e.g., regular ethernet and multiple IP-over-<pick your favorite
high-speed network> networks). Without this change, invoking
MPI_COMM_SPAWN on hosts with 4 or more IP networks will fail
because we'll exceed 256 bytes for the port name. Some OMPI
developer test clusters already have this kind of configuration
(e.g., Cisco); it is expected that this is not too common in the
real world yet, but with "manycore" coming, having multiple
IP-based networks in a single server will likely become more
common.
This commit was SVN r19638.
we already have them in orte_process_info. Refs trac:1523.
This commit was SVN r19615.
The following Trac tickets were found above:
Ticket 1523 --> https://svn.open-mpi.org/trac/ompi/ticket/1523
help messages so that users only see the message once instead of N
times when their MPI app crashes.
Note that there is a tradeoff here -- we now call malloc in this
particular "show the error" code path. This shouldn't usually be a
problem, because the errors typically displayed through this mechanism
are MPI API argument problems (e.g., sending a negative count to
MPI_SEND), and not memory errors. But such API argument errors could
be a consequence of of a prior memory error, so there's a nonzero
chance that the error failure will fail to print because malloc
failed. In this case, the user can disable help message aggregation
(via the orte_base_want_aggregate MCA parameter) and we'll fall back
to the no-malloc code path (but without aggregation).
Note that we won't aggregate before MPI_INIT or after MPI_FINALIZE.
So if you call an MPI function before MPI_INIT / after MPI_FINALIZE,
you'll still see the error message N times. Nothing we can do about
that; we need ORTE to do the aggregation properly (which is obviously
unavailable before MPI_INIT / after MPI_FINALIZE).
This commit was SVN r19611.
Terry and George in the non-sparse-groups scenarios. Fixes trac:1464.
Will file a new ticket to actually resolve IDs when sparse groups are
used.
This commit was SVN r19610.
The following Trac tickets were found above:
Ticket 1464 --> https://svn.open-mpi.org/trac/ompi/ticket/1464
Thanks to George and Jeff for pointing out a better way to do this.
This commit was SVN r19573.
The following SVN revision numbers were found above:
r19566 --> open-mpi/ompi@351c3a3a86
figure it out at runtime (really meaning: we'll still default to "0"
unless something explicitly overrides to 1, such as the openib BTL).
This way, ompi_info doesn't confusingly report mpi_leave_pinned==0 for
mpi_leave_pinned, but we end up running with mpi_leave_pinned==1.
Fixes trac:1502.
This commit was SVN r19571.
The following Trac tickets were found above:
Ticket 1502 --> https://svn.open-mpi.org/trac/ompi/ticket/1502
remove the unconditional opal_output's when mmap() fails, and instead,
conditionally output the failure message via btl_base_verbose settings.
This commit was SVN r19547.
file. breaks windows compilation. see r19502
This commit was SVN r19544.
The following SVN revision numbers were found above:
r19502 --> open-mpi/ompi@ce42e749a0
The new component fixes a number of problems with the old component. The core algorithm is the same, but by changing the data strucutres a bit we have improved performance and memory utilization.
There are still a couple corner cases that still need some work. However, I did not want to delay bringing this into the trunk (and v1.3 branch) for too much longer.
This commit was SVN r19537.
This fixes trac:1477.
Help provided by Jeff and Terry.
This commit was SVN r19533.
The following Trac tickets were found above:
Ticket 1477 --> https://svn.open-mpi.org/trac/ompi/ticket/1477
checking for contiguous datatypes by using our native DDT engine
(rather than several MPI_* calls). The majority of the work is in the
IO ROMIO module.c file, but there's a small part in
adio/common/iscontig.c that we're also submitting upstream.
This commit was SVN r19509.
mostly don't use this mechanism, as we have to be thread safe in order to
really take full advantage of it. The unexpected handler is called by one
of th MX threads, and we do not have control on the moment. In a non threaded
case, this will completely destroy our recv requests queues, so the safest
approach is to don't the unexpected handler.
This commit was SVN r19496.
MPI::SEEK_SET and friends, suggested by Doug Gregor. This way allows
users to utilize SEEK_SET in a case statement, which they could not do
with our previous method.
This commit was SVN r19494.
way".
Don't modify coords in the top-level API function because coords is an
IN variable. Instead, as Nysal noted, the real cause of the problem
was a missing ! down in topo_base_cart_rank.c. Put a comment down in
topo_base_cart_rank.c explaining what's going on so that the code is
not so cryptic.
Refs trac:1363.
This commit was SVN r19487.
The following Trac tickets were found above:
Ticket 1363 --> https://svn.open-mpi.org/trac/ompi/ticket/1363
correctly in case of MPI_PROC_NULL with persistent requests.
As of r12339, the req_status of the request is initialized
correclty and being used in {{{ompi_request_test}}} and
{{{ompi_request_wait}}}.
So, just set the status, getting rid of the if-statement.
Checked by Jeff using mtt.
This commit was SVN r19485.
The following SVN revision numbers were found above:
r12339 --> open-mpi/ompi@020efdf1f9
need to clean them up during ompi_mpi_finalize(), though...
This commit was SVN r19462.
The following SVN revision numbers were found above:
r19458 --> open-mpi/ompi@697dc524c1
* Various changes to enable 0-dimensional cartesian communicators:
* Set various mtc_* members to NULL when there are 0 dimensions (and
don't bother trying to memcpy these arrays when duplicating the
communicator -- because they're NULL)
* adjust topo_base_cart_sub to correctly handle 0 dimensions
(simplified it a bit)
* adjust a few error codes to return ERR_OUT_OF_RESOURCE
* adjust error checking of CART_CREATE, CART_RANK
* Allow MPI_GRAPH_CREATE to accept 0 == nnodes.
* Bump reported MPI version in mpi.h to 2.1
This commit was SVN r19461.
The following Trac tickets were found above:
Ticket 1236 --> https://svn.open-mpi.org/trac/ompi/ticket/1236
for the F90 type create functions to the requirements of MPI 2.1 standard.
Advice to implementors. An application may often repeat a call to
MPI_TYPE_CREATE_F90_xxxx with the same combination of (xxxx,p,r).
The application is not allowed to free the returned predefined, unnamed
datatype handles. To prevent the creation of a potentially huge amount of
handles, the MPI implementation should return the same datatype handle for
the same (REAL/COMPLEX/INTEGER,p,r) combination. Checking for the
combination (p,r) in the preceding call to MPI_TYPE_CREATE_F90_xxxx and
using a hash-table to find formerly generated handles should limit the
overhead of finding a previously generated datatype with same combination
of (xxxx,p,r). (End of advice to implementors.)
This commit fixes trac:1239, and #712.
This commit was SVN r19458.
The following Trac tickets were found above:
Ticket 1239 --> https://svn.open-mpi.org/trac/ompi/ticket/1239
* Protect an orte variable used in the orte debugger stuff
* Initialize the datatype code in the Catamount code, as we need it
for intercommunicators (the proc code needs it to pack the remote
name)
* Turn on a bunch of the orte datatype code so that ORTE_NAME is available.
This commit was SVN r19457.
guarantee local progress, my opinion is we don't need to do anything
special for complete sends. Perhaps I'm wrong on that one, in which
case this implementation of send_complete is not quite right.
* Give a slightly better error message when a catchall is hit, so that
we can at least know *which* catchall is hit.
This commit was SVN r19456.
See opal/mca/paffinity/paffinity.h for explanation as to the physical vs logical nature of the params used in the API.
Fixes trac:1435
This commit was SVN r19391.
The following Trac tickets were found above:
Ticket 1435 --> https://svn.open-mpi.org/trac/ompi/ticket/1435
2. fix a bug in the initial communicator creation of llcomm
3. fix a bug which showed up as the result of fixing issue number 2: we have
to check now whether llcomm has really be created before freeing the
according llcomm in hierarch_destruct.
This commit was SVN r19361.
generate an overlap between the different layers. Why four versions? Because
there is right now always the trade-off between using non-blocking operations
on a layer with a trivial, linear algorithm and using the more sophisticaed
algorithms in a blocking manner.
- bcast_intra_seg used the bcast of lcomm and llcomm, similarly
to original algorithm in hierarch. However, it can segment
the message, such that we might get an overlap between the two
layers. This overlap is based on the assumption, that a process
might be done early with a bcast and can start the next one.
- bcast_intra_seg1: replaces the llcomm->bcast by isend/irecvs
to increase the overlap, keeps the lcomm->bcast however
- bcast_intra_seg2: replaced lcomm->bcast by isend/irecvs
to increase the overlap, keeps however llcomm->bcast
- bcast_intra_seg3: replaced both lcomm->bcast and llcomm->bcast
by isend/irecvs
The code is lightly tested, more testing to follow right now.
This commit was SVN r19358.
Roland noticed that the QLogic HCA driver was using the PCIe vendor ID
for the ibv_query_device so the IEEE OUI value is now used. This means
the config file should recognize the vendor ID value 0x1175 too.
This commit was SVN r19277.
Possibly fixes CID 417
* ensure to initialize inner members upon default constructors using
the same syntax across all classes
* remove some member variables that aren't used anymore
* "initialize" the inner MPI_Status in the default constructor for
MPI::Status by calling the default constructor mpi_status(). This
may or may not silence CID 417; we'll see what happens in
subsequent Coverity Prevent runs.
This commit was SVN r19228.
* Make the creation of the build dir for the man pages a bit more
robust (thanks to suggestions from Ralf W.).
* Only distribute the .Xin files, not the .X man pages themselves.
* Make the .X files depend on opal_config.h so that if you re-run
configure and change opal_config.h (e.g., a new version), the man
pages should get rebuilt.
* Man pages are now cleaned with "distclean", not "maintainer-clean".
* Fix a typo in opal_crs.7in.
* Udpate make_dist_tarball to update "date" in the VERSION file.
* Make make_dist_tarball a bit friendlier to hg checkouts.
This commit was SVN r19219.
* use "warn_on_fork" instead of "do_not_warn_on_fork" -- i.e.,
use positive logic instead of negative logic
* ensure that pthread_atfork() is only called once
* amended the error message to include the hostname, PID, and
MPI_COMM_WORLD rank of the offender
* ensure that the warn_fork_cb() function is only defined if
HAVE_PTHREAD_H so that we don't get a compiler warning if it isn't
used
This commit was SVN r19204.
The following SVN revision numbers were found above:
r19196 --> open-mpi/ompi@277e4ac292
This is setup so that it only is issued once (as opposed to every time they do it), and goes through orte_show_help so the user doesn't get hammered by #procs copies of the warning. In addition, there is a new MCA param (can't have too many!) to shut the warning off altogether.
This closes ticket #1244
This commit was SVN r19196.
(it is just set within MCA_PML_OB1_RECV_REQUEST_UNPACK)
Iff Coverity's prevent makes usage of __attribute__(unused),
this should get rid of warning.
Relates to CID1060
Would then apply to a many int _rc; definitions, that are
used in other macros in similar fashion...
This commit was SVN r19179.
Revise the scope precedence in the MPI_Publish, Unpublish, and Lookup functions. If a global server was specified and is available, then default to using it for all three functions. If not, then default to using local scope.
If an info_key was provided, then it takes preference. We always follow the user's direction - this change only impacts the scope ordering if the user -doesn't- tell us the order to use.
This commit was SVN r19146.
The optimization that was introduced a year ago for saving a collective
synchronization step for certain communicator creation functions has to be
disabled for now. The bug has been exposed by the hierarch module, but could
appear as well for inter-communicator creations. The problem is, that within a
communicator creation step we invoke a comm_dup (for intercomm_create) or
other collective operations (in case of hierarch) before all processes have
been synchronized. This lead to the "Dropped message for non-existant
communicators" error. This commit disables the optimization without removing
it from the code base. In theory, it can be enabled again as soon as we have
the unexpected message queues for unknown cid's, which were required if I
remember right anyway for the multi-threaded scenarios and potentially for
fault tolerance.
Before moving the patch to 1.3 I would like to let it soak for a couple of
days on trunk. Please note, taht my 2nd comment on ticket #1408 was
semi-correct, since the order of activation of the communicator and quering
the collective module have already been changed earlier.
This commit was SVN r19139.
The following Trac tickets were found above:
Ticket 1408 --> https://svn.open-mpi.org/trac/ompi/ticket/1408
versions, dates and build names.
Fixes trac:1387
Big thanks to Jeff and Brian for help and oversight.
This commit was SVN r19120.
The following Trac tickets were found above:
Ticket 1387 --> https://svn.open-mpi.org/trac/ompi/ticket/1387
set when it launches under debuggers using the --debug option.
This commit was SVN r19116.
The following Trac tickets were found above:
Ticket 1361 --> https://svn.open-mpi.org/trac/ompi/ticket/1361
put the name of the file that set them if they were set by file. This is of great assistance to support personnel trying to understand why a user is having pro
blems.
Coordinated with Jeff.
This commit was SVN r19111.
that by decreasing the btl_inuse if there was already a registered BTL we basically reset
the changes for this new BTL to register it's progress function, even if it was supposed to
handle another peer.
This commit was SVN r19080.
* add "register" function to mca_base_component_t
* converted coll:basic and paffinity:linux and paffinity:solaris to
use this function
* we'll convert the rest over time (I'll file a ticket once all
this is committed)
* add 32 bytes of "reserved" space to the end of mca_base_component_t
and mca_base_component_data_2_0_0_t to make future upgrades
[slightly] easier
* new mca_base_component_t size: 196 bytes
* new mca_base_component_data_2_0_0_t size: 36 bytes
* MCA base version bumped to v2.0
* '''We now refuse to load components that are not MCA v2.0.x'''
* all MCA frameworks versions bumped to v2.0
* be a little more explicit about version numbers in the MCA base
* add big comment in mca.h about versioning philosophy
This commit was SVN r19073.
The following Trac tickets were found above:
Ticket 1392 --> https://svn.open-mpi.org/trac/ompi/ticket/1392
have/need lseek64" issue. This fix is also included in MPICH2 after
v1.0.7.
This commit was SVN r19070.
The following Trac tickets were found above:
Ticket 1419 --> https://svn.open-mpi.org/trac/ompi/ticket/1419
"make distclean". It's not clear whether it's an Automake bug or
whether what I did simply is not supported (I've got pending mail into
Ralf W. asking about it). The short version is that during "make
distclean", ompi/mpi/f77/Makefile would rm -rf ompi/mpi/f77/.deps.
But ompi/Makefile still include's some .Plo files from that directory,
so Bad Things happened when "make distclean" unrolled from the
ompi/mpi/f77 dir back up to the ompi/ dir.
So I went with George's original suggestion and moved the f77 "base"
files in question into a new directory: ompi/mpi/f77/base and put a
Makefile.include in there. That way, this directory is not traversed
twice by distclean, and .deps is only removed when it is supposed to
be. Maybe we'll be able to do it a little better someday, but that's
the way it is now.
I'll check this with a fresh checkout once this is committed to SVN as
well; some of these kinds of problems don't show up until you do a
build from a completely fresh SVN checkout.
This commit was SVN r19054.
The following SVN revision numbers were found above:
r19040 --> open-mpi/ompi@9f4d4c4312
SVN version (r19045), but I also edited the svn:ignore to ignore these
files in the same SVN commit -- I suspect that SVN got confused and
did not actually delete them.
This commit was SVN r19048.
The following SVN revision numbers were found above:
r19045 --> open-mpi/ompi@63b63d48c3
Update the version of ROMIO to that which was contained in
MPICH2-1.0.7, plus a few patches from the upstream ROMIO maintainers
(because OMPI uses a few code paths in ROMIO that MPICH2 does not;
there were a few compile bugs in the ROMIO from MPICH2-1.0.7).
Added an info MCA param to be able to tell which version of ROMIO is
contained in OMPI: io_romio_version.
Many, many thanks to romio-maint@mcs.anl.gov for all their help in
integrating this new version of ROMIO into Open MPI.
This commit was SVN r19045.
The following Trac tickets were found above:
Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
are properly linked against libmpi.la.
This required a little creative AM usage, inspired by discussion on
OMPI devel list:
* Make a new ompi/mpi/f77/Makefile_f77base.include; effectively move
the building of the f77 "base" glue stuff (libmpi_f77base.la) into
this Makefile and away from ompi/mpi/f77/Makefile.am. The sources
in question require some specific CPPFLAGS, so we couldn't just add
the raw sources into libmpi_la_SOURCES, unfortunately.
* Include this new Makefile in the top-level ompi/Makefile.am
* The libmpi_f77base.la LT convenience library was already sucked
into libmpi.la; breaking it out into its own Makefile allows us
to build it earlier and therefore complete buidling libmpi.la
earlier.
* Side effect: the ompi/mpi/Makefile.am is now mostly unnecessary; it
no longer specifies a SUBDIRS for each of the bindings directories
to traverse into (since they are now in the top-level SUBDIRS). As
such, the man pages are now also now included in the top-level
ompi/Makefile.am.
The end of the result is that libmpi.la -- including a few sources
from mpi/f77 -- is fully built before the C++, F77, and F90 bindings
are built. Therefore, the C++, F77, and F90 bindings libraries can
all link against libmpi.la.
This commit was SVN r19040.
The following Trac tickets were found above:
Ticket 1409 --> https://svn.open-mpi.org/trac/ompi/ticket/1409
* Use synonym/deprecated MCA param API for some mca base params
* In openib BTL, if we have appropriate memory hooks support, and if
mpi_leave_pinned and mpi_leave_pinned_pipeline were not set by the
user, set mpi_leave_pinned to 1.
* Defer checking mpi_leave_pinned_* until as late as possible (i.e.,
until after the btl's have had a chance to set mpi_leave_pinned to
1):
* in ob1 pml
* in rdma mpool
This commit was SVN r19022.
The following Trac tickets were found above:
Ticket 1379 --> https://svn.open-mpi.org/trac/ompi/ticket/1379
a little bit more than "BTL was able to add some procs". The real condition to
allow the BTL progress is that we will use it to send/recv data to/from some
of the peers (this include the BTL exclusivity in the process).
This commit was SVN r19010.
"!OpenFabrics" / neutral (i.e., refer to IB and/or iWARP).
* Mostly just type, variable/field, and funcion name changes, such as
s/hca/device/g, etc.
* Changed the INI file for the hardware-specific parameters to be
mca-btl-openib-device-params.ini.
* Updated a lot of help messages in the help-*.txt files, not just to
update it to be !OpenFabrics/neutral language, but also for some
consistency of tone, indenting, etc.
* Deprecated a bunch of MCA params in favor of language-neutral new
ones:
* btl_openib_warn_no_hca_params_found (s/hca/device/)
* btl_openib_hca_param_files
* btl_openib_ib_cq_size (s/_ib_/_of_/)
* btl_openib_ib_max_inline_data
* btl_openib_ib_psn
* btl_openib_ib_mtu
* btl_openib_ib_pkey_ix
* btl_openib_ib_pkey_val
This commit was SVN r18985.
The following Trac tickets were found above:
Ticket 1295 --> https://svn.open-mpi.org/trac/ompi/ticket/1295
The rdmacm event handler has no way of reporting fatal errors to the upper
layers. By calling mca_btl_openib_endpoint_invoke_error in the rdmacm event
handler for the errors encountered, these errors can now be handled
appropriately.
Closes out Ticket #1283
This commit was SVN r18980.
environment, file, or API override).
Refs trac:1397
This commit was SVN r18943.
The following Trac tickets were found above:
Ticket 1397 --> https://svn.open-mpi.org/trac/ompi/ticket/1397
Short version: remove opal_paffinity_alone and restore
mpi_paffinity_alone. ORTE makes various information available for the
MPI layer to decide what it wants to do in terms of processor
affinity.
Details:
* remove opal_paffinity_alone MCA param; restore mpi_paffinity_alone
MCA param
* move opal_paffinity_slot_list param registration to paffinity base
* ompi_mpi_init() calls opal_paffinity_base_slot_list_set(); if that
succeeds use that. If no slot list was set, see if
mpi_paffinity_alone was set. If so, bind this process to its Node
Local Rank (NLR). The NLR is the ORTE-maintained slot ID; if you
COMM_SPAWN to a host in this ORTE universe that already has procs
on it, the NLR for the new job will start at N (not 0). So this is
slightly better than mpi_paffinity_alone in the v1.2 series.
* If a slot list is specified *and* mpi_paffinity_alone is set, we
display an error and abort.
* Remove calls from rmaps/rank_file component to register and lookup
opal_paffinity mca params.
* Remove code in orte/odls that set affinities - instead, have them
just pass a slot_list if it exists.
* Cleanup the orte/odls code that determined
oversubscribed/want_processor as these were just opposites of each
other.
This commit was SVN r18874.
The following Trac tickets were found above:
Ticket 1383 --> https://svn.open-mpi.org/trac/ompi/ticket/1383
If IBCM was explicitly specified with exclude/include parameter,
OpenIB BTL will enable verbose report for "/dev/infiniband/ucm" error,
other way the error will not be reported.
This commit was SVN r18868.
Lenny and I went back and forth on whether we should simply register
another "mpi_paffinity_alone" MCA param and then try to figure out
which one was set in ompi_mpi_init, but there was difficulty in
figuring out what to do. So it seemed like the Right Thing to do was
to implement what was committed in r18770; then we could tell where
MCA parameters were set from and you could do Better Things (this is
also useful in the openib BTL, where parameters can be set either via
MCA parameter or via an INI file).
But after that was done, it seemed only a few steps further to
actually implement two new features in the MCA params area:
* Synonyms (where one MCA param name is a synonym for another)
* Allow MCA params and/or their synonyms to be marked as "deprecated"
(printing out warnings if they are used)
These features have actually long been discussed/desired, and I had
some time in airports and airplanes recently where I could work in
this stuff on a standalone laptop. So I did it. :-)
This commit introduces these two new features, and then uses them to
register mpi_paffinity_alone as a non-deprecated synonym for
opal_paffinity_alone. A few other random points in this commit:
* Add a few error checks for conditions that were not checked before
* Correct some comments in mca_base_params.h
* Add a few comments in strategic places
* ompi_info now prints additional information:
* for any MCA parameter that has synonyms, it lists all the
synonyms
* synonyms are also output as 1st-class MCA params, but with an
additional attribute indicating that they have a "parent"
* all MCA param name (both "real" or "synonym") will output an
attribute indicating whether it is deprecated or not. A synonym
is deprecated if it iself is marked as deprecated (via the
mca_base_param_regist_syn() or mca_base_param_register_syn_name()
functions) or if its "parent" MCA parameter is deprecated
This commit was SVN r18859.
The following SVN revision numbers were found above:
r18770 --> open-mpi/ompi@8efe67e08c
The following Trac tickets were found above:
Ticket 1383 --> https://svn.open-mpi.org/trac/ompi/ticket/1383
first to the trunk. So, here is the trunk checkin:
The call to orte_show_help() to notify truncation of the max_inline value
was missing the want_error_header boolean, which eventually results in
a SEGV. This change corrects the call with the bool set to true.
This commit was SVN r18839.
These are mostly long additions to comments to document what is going on and why, and how/where it may be revised in the future. Just a couple of small, but important, changes to the code itself.
This commit was SVN r18827.
see how the next gen panasas stuff does in terms of warnings; we can
always re-merge this later if we want to. It's just easier if we have
as little OMPI-specific code as possible (particularly when we know
that the panasas code has some big changes coming).
This commit was SVN r18823.
The following SVN revision numbers were found above:
r17543 --> open-mpi/ompi@b4ec81a9fd
already, and we're just about to do a ROMIO version refresh -- so the
less OMPI-specific code we have (e.g., indenting and whatnot), the
better.
Refs trac:1370.
This commit was SVN r18821.
The following SVN revision numbers were found above:
r16691 --> open-mpi/ompi@8dca19cb3b
r16693 --> open-mpi/ompi@037a533752
The following Trac tickets were found above:
Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
ROMIO in Open MPI (the new version of ROMIO will make this patch
defunct, and David Daniel has confirmed that no one at LANL is using
this functionality, anyway).
Refs trac:1370.
This commit was SVN r18819.
The following Trac tickets were found above:
Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
hierarch disables itself now if the pml module used is *not* ob1. The reason
is, that the multi-level hierarchy detection algorithm checks the names of the
btl modules used. In case there are no btl's, we would segfault.
Furthermore, three minor changes:
- the 2-level hierarchy detection is now the default (sm vs. everything else
in the world).
- add udapl to the list of protocols checked for by the multi-level hierarch detection
- some of the verbose statements of hierarch were inaccurate. Fixed those comments/messages.
This commit was SVN r18817.
With help from Brian, modify the ompi/proc/proc.c code to be more thread-safe. Remove the list operations from the ompi_proc_t constructor and destructor. Insert list appends to ompi_proc_init and ompi_proc_find_and_add as required, and protect those with thread locks. Let only the ompi_proc_finalize function actually remove objects from the ompi_proc_list.
Cleanup a few places where functions might return without unlocking a thread. Ensure the ompi_proc_world also does an OBJ_RETAIN so that the reference count on any subsequently released object is correct.
This commit was SVN r18816.
1. repair of the linear and direct routed modules
2. repair of the ompi/pubsub/orte module to correctly init routes to the ompi-server, and correctly handle failure to correctly parse the provided ompi-server URI
3. modification of orterun to accept both "file" and "FILE" for designating where the ompi-server URI is to be found - purely a convenience feature
4. resolution of a message ordering problem during the connect/accept handshake that allowed the "send-first" proc to attempt to send to the "recv-first" proc before the HNP had actually updated its routes.
Let this be a further reminder to all - message ordering is NOT guaranteed in the OOB
5. Repair the ompi/dpm/orte module to correctly init routes during connect/accept.
Reminder to all: messages sent to procs in another job family (i.e., started by a different mpirun) are ALWAYS routed through the respective HNPs. As per the comments in orte/routed, this is REQUIRED to maintain connect/accept (where only the root proc on each side is capable of init'ing the routes), allow communication between mpirun's using different routing modules, and to minimize connections on tools such as ompi-server. It is all taken care of "under the covers" by the OOB to ensure that a route back to the sender is maintained, even when the different mpirun's are using different routed modules.
6. corrections in the orte/odls to ensure proper identification of daemons participating in a dynamic launch
7. corrections in build/nidmap to support update of an existing nidmap during dynamic launch
8. corrected implementation of the update_arch function in the ESS, along with consolidation of a number of ESS operations into base functions for easier maintenance. The ability to support info from multiple jobs was added, although we don't currently do so - this will come later to support further fault recovery strategies
9. minor updates to several functions to remove unnecessary and/or no longer used variables and envar's, add some debugging output, etc.
10. addition of a new macro ORTE_PROC_IS_DAEMON that resolves to true if the provided proc is a daemon
There is still more cleanup to be done for efficiency, but this at least works.
Tested on single-node Mac, multi-node SLURM via odin. Tests included connect/accept, publish/lookup/unpublish, comm_spawn, comm_spawn_multiple, and singleton comm_spawn.
Fixes ticket #1256
This commit was SVN r18804.
* Move the passive side QP move to RTS to before we send the reply
(vs. sending it after we get the RTU). A lengthy comment explains
the need for this.
* Add some timers to the code for analyzing where time is spent.
* Clarify a few error messages.
* Currently have a loop around ib_cm_listen() because sometimes it
fails for seeminly no reason. Have pending e-mails in to Sean
Hefty to see if we can figure out why this is happening. Note that
the more MPI processes you add, the more likely this error is to
occur (e.g., ran 720 processes and it happens at least 50% of the
time). This makes IBCM somewhat unattractive for general use;
hopefully we can get a fix...
This commit was SVN r18766.
endpoint.c) because it's almost identical in all the CPC's. OOB,
XOOB, and IBCM now all invoke the btl error handler properly if
there's an error during wireup. RDMACM still needs to be done.
This commit was SVN r18764.
The following SVN revision numbers were found above:
r18762 --> open-mpi/ompi@3eda04578f
upper level btl (and therefore the PML) when something goes wrong
during wireup.
Refs trac:1283.
This commit was SVN r18762.
The following Trac tickets were found above:
Ticket 1283 --> https://svn.open-mpi.org/trac/ompi/ticket/1283
* Properly handle non-symmetric subnet ID's
* Be a bit more stringent when checking for the GID
* Add lots of BTL_VERBOSE's for diagnostics
This commit was SVN r18754.
The issue is that the field mca_topo_base_comm_t->mtc_periods_or_edges
has a different length, depending on whether the communicator is a
graph or a cart. One of the comm dup functions always assumed that it
was the length required by graph comms, which could lead to badness in
some cases. This commit makes the legnth of that field on a comm dup
be the proper length and copies the data over appropriately.
I also changed the syntax of the ompi_comm_copy_topo() function to use
shorter pointer notation; it made the code much easier to read and
fix.
This commit was SVN r18752.
The following Trac tickets were found above:
Ticket 1345 --> https://svn.open-mpi.org/trac/ompi/ticket/1345
as the send and the put share the same execution path and in the case of the
put the MCA_BTL_DES_SEND_ALWAYS_CALLBACK was not set.
This commit was SVN r18735.
ompi_info will crash due to a reference to a unalloced struct. Add a check for
this struct to prevent this crash.
This commit was SVN r18727.
The following SVN revision numbers were found above:
r18725 --> open-mpi/ompi@c2351d39f1
lists of flags for exec. ' ' is a magic value that means match all
white space, and trim leading / trailing whitespace. Will prevent
many spurious arguments to underlying compiler.
This commit was SVN r18726.
If rdmacm cpc is disabled and an iwarp device is forced to be used, then
mca_btl_openib_get_iwarp_subnet_id will attempt to reference an uninitalized
list. Modify the code to check for the uninitalized list and return zero.
Also, fix a memory leak caused by not freeing alloced addresses structs during
shutdown.
This commit was SVN r18725.
the fragments that failed to be send, there is no need to replicate the same
mechanism in the BTL.
Force the SM BTL to empty all ack fragments in the component progress function.
This commit was SVN r18724.
INI file use_eager_rdma value (fixes trac:1169)
* fixed a typo in a MCA param help message
* made the check for enabling short/eager RDMA more robust in the
presence of progress threads; it now emits a show_help warning
This commit was SVN r18723.
The following Trac tickets were found above:
Ticket 1169 --> https://svn.open-mpi.org/trac/ompi/ticket/1169
specified, probe for max value supported by device.
This commit was SVN r18720.
The following Trac tickets were found above:
Ticket 1355 --> https://svn.open-mpi.org/trac/ompi/ticket/1355
of strings. We mostly did the Right Things already; I simplified the
code a bit and also had us not write to more characters in the C
bindings than we're supposed to (per language in the MPI-2.1 spec).
Fixes trac:1238.
This commit was SVN r18705.
The following Trac tickets were found above:
Ticket 1238 --> https://svn.open-mpi.org/trac/ompi/ticket/1238
* Ensure to destroy the correct QP (local->id[num]->qp will always
have a valid pointer in it, even if we setup a dummy qp)
* Note two notable places where we need to figure out how to
propagate errors up from the CPC to the main BTL / PML when errors
occur. Probably have the same issue in IBCM, too.
This commit was SVN r18700.
two processes on the same server (!). So for today, we'll simply mark
all local processes that use iWARP adapters as "unreachable".
More details in #1352.
This commit was SVN r18699.
(e.g., if you're excluding some devices, their destructors will be
invoked before the async event thread was setup for them).
This commit was SVN r18698.
multiple adapters (eg., Chelsio T3).
But we need to figure out how to determine a good value for the
resident adapter(s) at runtime. It's problematic because, for
example, Mellanox ConnectX and Chelsio T3 report max_inline values
differently at run-time. If you ibv_create_qp with a max_inline value
of 0, ConnectX reports back a value that is a formular based on a few
other values (e.g., max_send_sge and max_recv_sge). But T3 always
reports back "64".
We're looking into this to figure out the best way -- reducing the
default right now should allow other adapters to run while we figure
it out.
This commit was SVN r18697.
* Put the variable in the MPI namespace; keeps it safely segregated
from user apps
* Need to actually "extern" the variable to make the compiler not
complain that the variable is never referenced
This commit was SVN r18693.
the shared object when it is compiled with the Sun Studio C compiler.
Depends on where the extern variables that are included in the headers were
initialized, there can be instances wheter there is no storage allocated
for the variables and therefore the symbols may or may not be defined
when the debugger tries to dlopen this message queue dll.
This commit was SVN r18685.
the char string ident in the C++ library be non-static so that other
places can see it. This makes the C++ library version string
analogous to all the other version strings.
This commit was SVN r18679.
Update the ESS API so we can update the stored arch's should the modex include that info. Update ompi/proc to check/set the arch for remote procs, and add that function call to mpi_init right after the modex is done.
Setup to allow other grpcomm modules to decide whether or not to add the arch to the modex, and to detect if other entries have been made. If not, then the modex can just fall through. Begin setting up some logic in the "basic" module to handle different arch situations.
For now, default to the "bad" module so we will work in all situations, even though we may be sending around more info than we really require.
This fixes ticket #1340
This commit was SVN r18673.
(still need the real yod environment variable name), and add in some
lengthy comments explaining the two different methods of debugger
attach that we're using.
MPI handle debugging doesn't seem to be working at the moment; still
checking into it...
This commit was SVN r18672.
Some minor changes to help facilitate debugger support so that both mpirun and yod can operate with it. Still to be completed.
This commit was SVN r18664.
