rhc54
8053357fcc
Merge pull request #873 from rhc54/topic/static
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Add the libs required for PMIx to support static builds (and trim all excess whitespace)
2015-09-08 11:28:47 -07:00
Rolf vandeVaart
2e64a69fa9
Add some verbosity to help debug hwloc issues
2015-09-08 10:50:22 -07:00
Ralph Castain
291afe502f
Add the libs required for PMIx to support static builds
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Remove unneeded CPPFLAGS
2015-09-08 10:21:06 -07:00
Jeff Squyres
bc9e5652ff
whitespace: purge whitespace at end of lines
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Generated by running "./contrib/whitespace-purge.sh".
2015-09-08 09:47:17 -07:00
Jeff Squyres
12367d8444
whitespace-purge: switch from sed to perl
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The perl form is more portable.
2015-09-08 09:36:36 -07:00
Edgar Gabriel
c83e6ad0c8
fix coverty warnings 1322865 and 72136
2015-09-08 09:15:57 -05:00
rhc54
3fa6c635a3
Merge pull request #871 from rhc54/topic/dpm
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More dynamic op cleanups
2015-09-07 11:42:40 -07:00
Ralph Castain
e6add86e4f
Deal with connect/accept between two jobs from different mpirun's. Somewhat optimize connect/accept by using MPI bcast to distribute the participants instead of another PMIx lookup. Cleanup some Coverity issues.
2015-09-07 09:19:24 -07:00
Gilles Gouaillardet
c404e98dce
coll/ml: silence warnings (incorrect callback prototype)
2015-09-07 14:56:49 +09:00
Gilles Gouaillardet
56f8a7b840
coll/ml: declare a global variable as static to avoid an uninitialized common symbol.
2015-09-07 14:56:03 +09:00
rhc54
1989999543
Merge pull request #870 from rhc54/topic/connect
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Cleanup connect/disconnect and bring comm_spawn back online!
2015-09-06 11:14:47 -07:00
Ralph Castain
37c3ed68e7
Cleanup connect/disconnect and bring comm_spawn back online!
2015-09-06 10:27:39 -07:00
Jeff Squyres
794ee4a604
treematch: remove stale test
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This test was accidentally left over from
open-mpi/ompi@d97bc29102 that prevented
the treematch component from building.
2015-09-05 05:02:30 -07:00
Jeff Squyres
f782a7640e
usnic: minor re-order of Makefile.am sources
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Put the hwloc.c file alphabetically in the list.
2015-09-05 05:02:00 -07:00
rhc54
665b30376a
Merge pull request #868 from rhc54/topic/hwloc
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Remove OPAL_HAVE_HWLOC qualifier and error out if --without-hwloc is given
2015-09-04 17:58:07 -07:00
Ralph Castain
2ecbbc84e7
Hide a symbol that is only used in one file and is not properly prefixed
2015-09-04 17:08:24 -07:00
Ralph Castain
d97bc29102
Remove OPAL_HAVE_HWLOC qualifier and error out if --without-hwloc is given
2015-09-04 16:54:40 -07:00
rhc54
d45ccda813
Merge pull request #866 from rhc54/topic/updatepmix
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Update PMIx support
2015-09-04 11:09:36 -07:00
Ralph Castain
f6948c2bb4
Sync with PMIx master 43e45c3. Get multi-node publish/lookup/unpublish working
2015-09-04 10:07:17 -07:00
Pavel Shamis / Pasha
c3446f363b
Merge pull request #859 from shamisp/topic/ml_soft_disable
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ML: Replace opal ignore with a zero priority
2015-09-04 12:37:37 -04:00
Rolf vandeVaart
7f07ee1787
Merge pull request #865 from rolfv/pr/add-mpool-verbosity
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While debugging user problems, these extra verbosity statements would be helpful
2015-09-04 12:03:30 -04:00
Pavel Shamis (Pasha)
32c69630ad
ML: Replace opal ignore with a zero priority
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The priority set by default to 0. As a result component open reports
an error and the component is not loaded (no resources allocated).
2015-09-04 11:28:47 -04:00
yohann
404393b9d7
mtl/ofi: Minor code cleanup.
2015-09-03 15:04:55 -07:00
yohann
a8cac09769
mtl/ofi: Renamed macro to prevent clash with FI_ namespace.
2015-09-03 14:42:45 -07:00
Rolf vandeVaart
ebfd00b66e
While debugging user problems, these extra verbosity statements would be helpful
2015-09-03 17:15:39 -04:00
Howard Pritchard
0557beee22
Merge pull request #864 from hppritcha/topic/pmix_cray_more_funcs
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pmix/cray: more stubs plus a get_version method
2015-09-03 14:52:46 -06:00
Howard Pritchard
6e7345c790
pmix/cray: more stubs plus a get_version method
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Add more stubs to reduce likelihood of future
mysterious segfaults if some of the newer pmix
funcs start to get used within ompi.
Add a get_version to return the version of the
Cray PMI library being used, since the Cray PMI
library actually has a function to get that info.
Be more accurate about which functions have a hope
of being implemented using Cray PMI and those which
never will.
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-09-03 12:51:50 -07:00
yohann
7adb9b7ab4
mtl/ofi: Handle -FI_EAGAIN on send and recv operations.
2015-09-03 10:47:00 -07:00
Edgar Gabriel
c9710660af
Merge pull request #863 from edgargabriel/topic/fcoll-static-cleanup
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Topic/fcoll static cleanup
2015-09-03 11:21:02 -05:00
Edgar Gabriel
a96a15a83c
re-enable the contiguous buffer optimization similarly to the dynamic component. Passes all hdf5testsi and our own test suite.
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Please enter the commit message for your changes. Lines starting
2015-09-03 10:13:03 -05:00
Edgar Gabriel
8007effc93
code cleanup for static component, similarly to the dynamic one
2015-09-03 10:12:45 -05:00
Jeff Squyres
6d9faf07e5
Merge pull request #858 from jsquyres/pr/fortran-use-only
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fortran configiry: test for USE...ONLY support
2015-09-03 10:19:48 -04:00
Edgar Gabriel
ac3a01c39c
Silence coverty warnings 1321702, 1321701, 1321700, 72331, 72330, 72327, 72326, 72325,
2015-09-03 09:10:25 -05:00
Jeff Squyres
66dda00f06
fortran configiry: test for USE...ONLY support
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As of v15.7, the PGI Fortran compiler does not properly support how
Open MPI uses the "USE ... ONLY" Fortran syntax to include modules
with conflicting symbol definitions (interestingly, pgfortran only has
a problem with this when compiling with -g).
In short, OMPI uses "USE :: module_aaa, ONLY: foo" and "USE ::
module_bbb, ONLY: bar" to use modules aaa and bbb, even though they
contain conflicting definitions for some symbols. However, the use of
the ONLY clause should preclude the inclusion of the conflicting
symbols -- as the word implies, it should direct the compiler to
*only* use the symbols identified by the clause (i.e., foo and bar, in
this example).
This commit adds a configure test for this capability. If the
compiler fails to build a simple test that mimics this behavior, then
disable the mpi_f08 bindings.
Fixes open-mpi/ompi#857
2015-09-02 15:55:24 -07:00
rhc54
f4a3a86c86
Merge pull request #856 from rhc54/topic/pub
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Bring the MPI_Publish functions online
2015-09-02 13:51:17 -07:00
Ralph Castain
a772b46c15
Bring the MPI_Publish and friends online
2015-09-02 12:04:07 -07:00
matcabral
1f9218a0bc
Fix for openib btl mca command line parameter btl_openib_mtu being
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ignored.
2015-09-02 02:22:30 -07:00
rhc54
5b49dc156f
Merge pull request #854 from rhc54/topic/pmix3
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Sync to PMIx 1.1, sha- 51479b0
2015-09-01 14:55:41 -07:00
Edgar Gabriel
e95d01be97
Merge pull request #847 from edgargabriel/topic/fcoll-dynamic-cleanup
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Topic/fcoll dynamic cleanup
2015-09-01 16:10:55 -05:00
Ralph Castain
95dbd70f44
Sync to PMIx 1.1, sha- 51479b0
2015-09-01 14:09:25 -07:00
Nathan Hjelm
83153aca94
Merge pull request #853 from hjelmn/osc_pt2pt_fixes
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osc/pt2pt: remove outstanding lock only after lock/flush ack received
2015-09-01 13:55:21 -06:00
Rolf vandeVaart
30b1a6e003
Merge pull request #836 from rolfv/pr/fix-cuda-war
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Add config code to check for need of workaround. Add runtime way to turn oiff just in case.
2015-09-01 15:05:29 -04:00
Nathan Hjelm
2a8cc5e637
osc/pt2pt: remove outstanding lock only after lock/flush ack received
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fixes #840
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-09-01 10:54:47 -06:00
Nathan Hjelm
f926796e57
Merge pull request #828 from hjelmn/openib_thread_fix
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openib thread fixes
2015-09-01 09:12:50 -06:00
Edgar Gabriel
82efc23e8d
iclean up indenting and tabs/space of fcoll_static_file_read/write_all
2015-09-01 09:39:33 -05:00
Edgar Gabriel
a1778406d6
Re-enable the contiguous buffer optimization to the read_all and the write_all routines.
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After long debugging, I found last week the reason this optimization originally broke
some hdf5 tests. We now pass the hdf5 test suite with the optimization being actively used.
2015-09-01 09:29:07 -05:00
Edgar Gabriel
c2c44b11dc
Code cleanup for dynamic read_all and write_all
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Specifically:
- reduce the number of realloc's and malloc's by moving
some arrays out of the cycle loop, if we know that there
size is not changing
- store the rank of the aggregator in a separate variable to avoid
continuous dereferencing
- change the wait_all logic in write_all to use a fix number of requests
(even if they are MPI_REQUEST_NULL)
- fix the timing to considere the two initial allgather and the one
allgatherv operation to be a part of it
- add more comments.
2015-09-01 09:29:07 -05:00
Edgar Gabriel
cf1e4e0d35
step 0: clean up indenting and space vs. tabs
2015-09-01 09:29:07 -05:00
rhc54
d8cb3fe705
Merge pull request #852 from rhc54/topic/pmix
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Sync to PMIx tarball - includes:
2015-09-01 06:54:34 -07:00
Gilles Gouaillardet
6dfa996760
configury: fix a typo in opal/mca/pmix/pmix1xx/configure.m4
2015-09-01 14:59:07 +09:00
