1
1

4268 Коммитов

Автор SHA1 Сообщение Дата
Pavel Shamis
452141bfb8 Bugfix for #1375.
- Adding configure options that allow to disable IB/RDMA-CM support.
- Code cleanup in openib section of configure

This commit was SVN r18830.
2008-07-08 06:32:54 +00:00
Ralph Castain
613d0f8017 Missed file...just some comment changes, but important ones
This commit was SVN r18828.
2008-07-08 04:02:31 +00:00
Ralph Castain
cf353a1412 Complete the revisions per Brian's email to devel list, plus lengthy discussions between Brian, Jeff, and myself.
These are mostly long additions to comments to document what is going on and why, and how/where it may be revised in the future. Just a couple of small, but important, changes to the code itself.

This commit was SVN r18827.
2008-07-08 03:56:51 +00:00
Jeff Squyres
83987fea75 Next step: Back out r17543 (ficxing a bunch of ROMIO warnings). Let's
see how the next gen panasas stuff does in terms of warnings; we can
always re-merge this later if we want to.  It's just easier if we have
as little OMPI-specific code as possible (particularly when we know
that the panasas code has some big changes coming).

This commit was SVN r18823.

The following SVN revision numbers were found above:
  r17543 --> open-mpi/ompi@b4ec81a9fd
2008-07-07 23:22:26 +00:00
Jeff Squyres
09ff80ff06 Back out r16691 and r16693 because the meat of them are upstream
already, and we're just about to do a ROMIO version refresh -- so the
less OMPI-specific code we have (e.g., indenting and whatnot), the
better. 

Refs trac:1370.

This commit was SVN r18821.

The following SVN revision numbers were found above:
  r16691 --> open-mpi/ompi@8dca19cb3b
  r16693 --> open-mpi/ompi@037a533752

The following Trac tickets were found above:
  Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
2008-07-07 22:33:49 +00:00
Jeff Squyres
a6cfe0c574 Remove LANL-specific Panasas patches. This is step 1 in upgrading the
ROMIO in Open MPI (the new version of ROMIO will make this patch
defunct, and David Daniel has confirmed that no one at LANL is using
this functionality, anyway).

Refs trac:1370.

This commit was SVN r18819.

The following Trac tickets were found above:
  Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
2008-07-07 22:08:26 +00:00
Edgar Gabriel
798f47b430 Fixes ticket #1334
hierarch disables itself now if the pml module used is *not* ob1. The reason
is, that the multi-level hierarchy detection algorithm checks the names of the
btl modules used. In case there are no btl's, we would segfault.

Furthermore, three minor changes:
 - the 2-level hierarchy detection is now the default (sm vs. everything else
 in the world).
 - add udapl to the list of protocols checked for by the multi-level hierarch detection
 - some of the verbose statements of hierarch were inaccurate. Fixed those comments/messages.

This commit was SVN r18817.
2008-07-07 18:44:48 +00:00
Ralph Castain
2a1e0a2e64 Fix ticket #1267
With help from Brian, modify the ompi/proc/proc.c code to be more thread-safe. Remove the list operations from the ompi_proc_t constructor and destructor. Insert list appends to ompi_proc_init and ompi_proc_find_and_add as required, and protect those with thread locks. Let only the ompi_proc_finalize function actually remove objects from the ompi_proc_list.

Cleanup a few places where functions might return without unlocking a thread. Ensure the ompi_proc_world also does an OBJ_RETAIN so that the reference count on any subsequently released object is correct.

This commit was SVN r18816.
2008-07-07 17:39:49 +00:00
Jeff Squyres
74aa9689e4 From an initial patch from George, update all the set/get errhandler
functions to use atomics in order to be thread safe.

This commit was SVN r18807.
2008-07-03 19:28:02 +00:00
Ralph Castain
ba5498cdc6 Repair the MPI-2 dynamic operations. This includes:
1. repair of the linear and direct routed modules

2. repair of the ompi/pubsub/orte module to correctly init routes to the ompi-server, and correctly handle failure to correctly parse the provided ompi-server URI

3. modification of orterun to accept both "file" and "FILE" for designating where the ompi-server URI is to be found - purely a convenience feature

4. resolution of a message ordering problem during the connect/accept handshake that allowed the "send-first" proc to attempt to send to the "recv-first" proc before the HNP had actually updated its routes.

Let this be a further reminder to all - message ordering is NOT guaranteed in the OOB

5. Repair the ompi/dpm/orte module to correctly init routes during connect/accept.

Reminder to all: messages sent to procs in another job family (i.e., started by a different mpirun) are ALWAYS routed through the respective HNPs. As per the comments in orte/routed, this is REQUIRED to maintain connect/accept (where only the root proc on each side is capable of init'ing the routes), allow communication between mpirun's using different routing modules, and to minimize connections on tools such as ompi-server. It is all taken care of "under the covers" by the OOB to ensure that a route back to the sender is maintained, even when the different mpirun's are using different routed modules.

6. corrections in the orte/odls to ensure proper identification of daemons participating in a dynamic launch

7. corrections in build/nidmap to support update of an existing nidmap during dynamic launch

8. corrected implementation of the update_arch function in the ESS, along with consolidation of a number of ESS operations into base functions for easier maintenance. The ability to support info from multiple jobs was added, although we don't currently do so - this will come later to support further fault recovery strategies

9. minor updates to several functions to remove unnecessary and/or no longer used variables and envar's, add some debugging output, etc.

10. addition of a new macro ORTE_PROC_IS_DAEMON that resolves to true if the provided proc is a daemon

There is still more cleanup to be done for efficiency, but this at least works.

Tested on single-node Mac, multi-node SLURM via odin. Tests included connect/accept, publish/lookup/unpublish, comm_spawn, comm_spawn_multiple, and singleton comm_spawn.

Fixes ticket #1256

This commit was SVN r18804.
2008-07-03 17:53:37 +00:00
Lenny Verkhovsky
ba1fa73881 Selectign Maffinity only if Paffinity selected fix
This commit was SVN r18797.
2008-07-03 13:39:34 +00:00
Jeff Squyres
7897db314e Add in the use of MPIR_being_debugged for DDT.
This commit was SVN r18796.
2008-07-03 12:27:35 +00:00
Jeff Squyres
160ba5fe11 Set max_inline_data for the iWARP adapters to be 64
This commit was SVN r18782.
2008-06-30 14:25:32 +00:00
Matthias Jurenz
c0ea3635b6 Improved passing of OMPI configure arguments to VT's configure (Ticket #1353)
This commit was SVN r18779.
2008-06-30 13:32:04 +00:00
Pavel Shamis
eaa7676c57 Changing default maximum inline data size
from Maximum_Supported_By_Device to 128 (our original value).

This commit was SVN r18774.
2008-06-30 07:47:09 +00:00
Jeff Squyres
59b7665a3a Clarify and correct comments
This commit was SVN r18768.
2008-06-28 14:15:04 +00:00
Jeff Squyres
f42f55f84b Several improvements and fixes to the openib IBCM CPC:
* Move the passive side QP move to RTS to before we send the reply
   (vs. sending it after we get the RTU).  A lengthy comment explains
   the need for this.
 * Add some timers to the code for analyzing where time is spent.
 * Clarify a few error messages.
 * Currently have a loop around ib_cm_listen() because sometimes it
   fails for seeminly no reason.  Have pending e-mails in to Sean
   Hefty to see if we can figure out why this is happening.  Note that
   the more MPI processes you add, the more likely this error is to
   occur (e.g., ran 720 processes and it happens at least 50% of the
   time).  This makes IBCM somewhat unattractive for general use;
   hopefully we can get a fix...

This commit was SVN r18766.
2008-06-28 10:53:58 +00:00
Jeff Squyres
67933e743c Move some of the things I did in r18762 to the openib BTL proper (in
endpoint.c) because it's almost identical in all the CPC's.  OOB,
XOOB, and IBCM now all invoke the btl error handler properly if
there's an error during wireup.  RDMACM still needs to be done.

This commit was SVN r18764.

The following SVN revision numbers were found above:
  r18762 --> open-mpi/ompi@3eda04578f
2008-06-27 22:48:45 +00:00
Jeff Squyres
3eda04578f Clean up a lot of error handling in IBCM CPC; properly pass error to
upper level btl (and therefore the PML) when something goes wrong
during wireup.

Refs trac:1283.

This commit was SVN r18762.

The following Trac tickets were found above:
  Ticket 1283 --> https://svn.open-mpi.org/trac/ompi/ticket/1283
2008-06-27 21:02:05 +00:00
Shiqing Fan
d129578694 Small fix for including unistd.h header file.
This commit was SVN r18758.
2008-06-27 16:25:31 +00:00
Jeff Squyres
ad16d8f335 Fix some issues in the ibcm CPC:
* Properly handle non-symmetric subnet ID's
 * Be a bit more stringent when checking for the GID
 * Add lots of BTL_VERBOSE's for diagnostics

This commit was SVN r18754.
2008-06-26 20:23:56 +00:00
Ralph Castain
f4621af954 Restore the route initialization to the global server, if one is specified. This enables us to publish/lookup to a global server when using the direct routed module.
This commit was SVN r18753.
2008-06-26 18:02:45 +00:00
Jeff Squyres
90576a435b Fixes trac:1345
The issue is that the field mca_topo_base_comm_t->mtc_periods_or_edges
has a different length, depending on whether the communicator is a
graph or a cart.  One of the comm dup functions always assumed that it
was the length required by graph comms, which could lead to badness in
some cases.  This commit makes the legnth of that field on a comm dup
be the proper length and copies the data over appropriately.

I also changed the syntax of the ompi_comm_copy_topo() function to use
shorter pointer notation; it made the code much easier to read and
fix. 

This commit was SVN r18752.

The following Trac tickets were found above:
  Ticket 1345 --> https://svn.open-mpi.org/trac/ompi/ticket/1345
2008-06-26 16:59:31 +00:00
Ralph Castain
6af8a73dc0 Modify the checking logic to look for NULL return
This commit was SVN r18749.
2008-06-26 14:08:36 +00:00
Ralph Castain
af8c167861 May be picky, but cleanup before returning in error conditions
This commit was SVN r18748.
2008-06-26 13:31:36 +00:00
Ralph Castain
3631a60181 Update the PML selection logic to detect when a modex is required, and in those cases to only have rank=0 report its selected module. This is per the email thread on the devel list:
http://www.open-mpi.org/community/lists/devel/2008/06/4223.php

This commit was SVN r18747.
2008-06-26 13:22:48 +00:00
Jeff Squyres
dd563f9297 Add more output to btl_base_verbose
This commit was SVN r18743.
2008-06-25 20:16:34 +00:00
Jeff Squyres
b8b1aded4e Hook all the ibcm diagnostics up to "--mca btl_base_verbose 1":
* Use BTL_VERBOSE
 * Remove tailing \n's
 * Remove redundant prefixes (BTL_VERBOSE outputs __FILE__, function,
   and __LINE__)

This commit was SVN r18742.
2008-06-25 19:19:03 +00:00
Jeff Squyres
26f6d9cf0c Properly protect the use of dev->transport_type and
IBV_TRANSPORT_IWARP.

This commit was SVN r18738.
2008-06-25 14:50:59 +00:00
Jeff Squyres
64034b65d0 Remove debugging message kruft
This commit was SVN r18737.
2008-06-25 11:32:33 +00:00
George Bosilca
df9e54194b Fix a deadlock in the put protocol for MX. The callback was never triggered,
as the send and the put share the same execution path and in the case of the
put the MCA_BTL_DES_SEND_ALWAYS_CALLBACK was not set.

This commit was SVN r18735.
2008-06-25 03:45:30 +00:00
George Bosilca
24316b77cf This commit is related to ticket #1362. The following devices respect the
behavior described on the ticket: elan, gm, mx, self, sm, tcp.

This commit was SVN r18734.
2008-06-25 03:35:07 +00:00
Jeff Squyres
edad3b66a2 Add warning message if you request one max_inline_data value and the
device reduces it.

This commit was SVN r18728.
2008-06-24 20:40:03 +00:00
Jon Mason
eefc8956b6 Fix a bug introduced in r18725
ompi_info will crash due to a reference to a unalloced struct.  Add a check for
this struct to prevent this crash.

This commit was SVN r18727.

The following SVN revision numbers were found above:
  r18725 --> open-mpi/ompi@c2351d39f1
2008-06-24 20:38:47 +00:00
Brian Barrett
ac337114e6 Use ' ' instead of / / for the regex in split() when preparing the different
lists of flags for exec.  ' ' is a magic value that means match all
white space, and trim leading / trailing whitespace.  Will prevent
many spurious arguments to underlying compiler.

This commit was SVN r18726.
2008-06-24 19:37:05 +00:00
Jon Mason
c2351d39f1 Fix Ticket #1359
If rdmacm cpc is disabled and an iwarp device is forced to be used, then
mca_btl_openib_get_iwarp_subnet_id will attempt to reference an uninitalized
list.  Modify the code to check for the uninitalized list and return zero.

Also, fix a memory leak caused by not freeing alloced addresses structs during
shutdown. 

This commit was SVN r18725.
2008-06-24 19:16:06 +00:00
George Bosilca
fbf341068a Remove the pending queue from the shared memory BTL. The PML is in charge of managing
the fragments that failed to be send, there is no need to replicate the same
mechanism in the BTL.
Force the SM BTL to empty all ack fragments in the component progress function.

This commit was SVN r18724.
2008-06-24 19:01:26 +00:00
Jeff Squyres
ea21c31f44 * MCA params btl_openib_use_eager_rdma can now override the
INI file use_eager_rdma value (fixes trac:1169)
 * fixed a typo in a MCA param help message
 * made the check for enabling short/eager RDMA more robust in the
   presence of progress threads; it now emits a show_help warning

This commit was SVN r18723.

The following Trac tickets were found above:
  Ticket 1169 --> https://svn.open-mpi.org/trac/ompi/ticket/1169
2008-06-24 18:31:46 +00:00
Jeff Squyres
e0545460ff Fixes trac:1355: allow INI file to set max_inline_data vale, and if not
specified, probe for max value supported by device.

This commit was SVN r18720.

The following Trac tickets were found above:
  Ticket 1355 --> https://svn.open-mpi.org/trac/ompi/ticket/1355
2008-06-24 17:18:07 +00:00
Terry Dontje
12baa72580 This commit fixes trac:1306
This commit was SVN r18718.

The following Trac tickets were found above:
  Ticket 1306 --> https://svn.open-mpi.org/trac/ompi/ticket/1306
2008-06-24 14:38:11 +00:00
George Bosilca
1eb62b6c48 Remove a warning. Close ticket #1357.
This commit was SVN r18717.
2008-06-24 14:23:02 +00:00
Jeff Squyres
3f95b906c5 Fixes trac:1085: Improves SLURM configure logic to also allow OS X or any platform where srun is found in the PATH.
This commit was SVN r18714.

The following Trac tickets were found above:
  Ticket 1085 --> https://svn.open-mpi.org/trac/ompi/ticket/1085
2008-06-23 23:12:55 +00:00
Lenny Verkhovsky
937380df2f Memory check after allocation in SM fixed
This commit was SVN r18706.
2008-06-22 14:52:44 +00:00
Jeff Squyres
51d833e8d1 Minor fixes and comment clarifications for MPI-2.1-mandated handling
of strings.  We mostly did the Right Things already; I simplified the
code a bit and also had us not write to more characters in the C
bindings than we're supposed to (per language in the MPI-2.1 spec).

Fixes trac:1238.

This commit was SVN r18705.

The following Trac tickets were found above:
  Ticket 1238 --> https://svn.open-mpi.org/trac/ompi/ticket/1238
2008-06-21 19:33:47 +00:00
Jeff Squyres
281c37afcc Ensure to ignoe the "empty" CPC components.
This commit was SVN r18702.
2008-06-21 11:39:53 +00:00
Jeff Squyres
807e2cc742 Mark a notable place where we need to return an error up to the BTL or
PML.

This commit was SVN r18701.
2008-06-20 22:11:49 +00:00
Jeff Squyres
5ded50df0e * Fix a > that should be ==
* Ensure to destroy the correct QP (local->id[num]->qp will always
   have a valid pointer in it, even if we setup a dummy qp)
 * Note two notable places where we need to figure out how to
   propagate errors up from the CPC to the main BTL / PML when errors
   occur.  Probably have the same issue in IBCM, too.

This commit was SVN r18700.
2008-06-20 22:09:30 +00:00
Jeff Squyres
0074126886 Per #1352, most iWARP adapters today cannot handle connections between
two processes on the same server (!).  So for today, we'll simply mark
all local processes that use iWARP adapters as "unreachable".

More details in #1352.

This commit was SVN r18699.
2008-06-20 22:08:00 +00:00
Jeff Squyres
f4145fce7a Ensure that we don't try to shut down a thread that is not [yet] there
(e.g., if you're excluding some devices, their destructors will be
invoked before the async event thread was setup for them).

This commit was SVN r18698.
2008-06-20 19:30:51 +00:00
Jeff Squyres
ed17b51204 Adjust the max_inline default size down so that it can be accepted on
multiple adapters (eg., Chelsio T3).

But we need to figure out how to determine a good value for the
resident adapter(s) at runtime.  It's problematic because, for
example, Mellanox ConnectX and Chelsio T3 report max_inline values
differently at run-time.  If you ibv_create_qp with a max_inline value
of 0, ConnectX reports back a value that is a formular based on a few
other values (e.g., max_send_sge and max_recv_sge).  But T3 always
reports back "64".

We're looking into this to figure out the best way -- reducing the
default right now should allow other adapters to run while we figure
it out.

This commit was SVN r18697.
2008-06-20 18:24:04 +00:00