Also includes some minor copytight header additions that were missed in previous checkins
fixes trac:2101 added cmr:v1.4
This commit was SVN r22676.
The following Trac tickets were found above:
Ticket 2101 --> https://svn.open-mpi.org/trac/ompi/ticket/2101
The change to just using SIGKILL was originally done due to problems whereby waitpid thought a proc had died, but it hadn't. We'll continue debugging that problem separately, but SIGTERM is required for C/R to work properly.
This commit was SVN r22674.
communicator that we created has a lower CID than the parent comm. This can
happen when using the hierarch collective communication module or for
inter-communicators (since we make a duplicate of the original communicator).
This is not a problem as long as the user calls MPI_Comm_free on the parent
communicator. However, if the communicators are not freed by the user but
released by Open MPI in MPI_Finalize, we walk through the list of still
available communicators and free them one by one. Thus, local_comm is freed
before the actual inter-communicator. However, the local_comm pointer in the
inter communicator will still contain the 'previous' address of the local_comm
and thus this will lead to a segmentation violation. In order to prevent that
from happening, we increase the reference counter local_comm by one if its CID
is lower than the parent. We cannot increase however its reference counter if
the CID of local_comm is larger than the CID of the inter communicators, since
a regular MPI_Comm_free would leave in that the case the local_comm hanging
around and thus we would not recycle CID's properly, which was the reason and
the cause for this trouble.
This commit fixes tickets 2094 and 2166. Note however, that I want to close
them manually, since a slightly different patch is required for the 1.4
series. This commit will have to be applied for the 1.5 series. And I will
need a volunteer to review it.
This commit was SVN r22671.
parameter (I just discovered while researching for v1.4 that v1.4 has
effectively this same function definition: it just always returns
true!).
This commit was SVN r22642.
This commit adds a lengthy comment in ompi_datatype.h that explains
why a one-sided datatype check was removed. The short version is that
we do have to allow some datatypes that may be unwise to use (e.g.,
"h" types of datatypes that have offsets in bytes -- MPI says it's ok
to use these), and our DDT engine can't currently detect datatypes
with absolute offsets, which MPI says it's ''not'' ok to use with
one-sided operations. Hence, we don't check for some datatypes that
are invalid to use with one-sided operations, and erroneous programs
may crash and burn. Life is hard.
The main point of this commit is that we now do allow datatypes for
one-sided operations that are supposed to be allowed.
This commit was SVN r22641.
The following Trac tickets were found above:
Ticket 2233 --> https://svn.open-mpi.org/trac/ompi/ticket/2233
discussion on the users list (see
http://www.open-mpi.org/community/lists/users/2009/12/11526.php).
Many thanks to Kevin Buckley who did most of the coding work, and to
Aleksej Saushev for his extreme patience in waiting for me to review
and commit this stuff.
This commit was SVN r22640.
other process should ignore this value. Thanks to Michael Hofmann
for investigating this issue.
This commit closes trac:2268.
This commit was SVN r22639.
The following Trac tickets were found above:
Ticket 2268 --> https://svn.open-mpi.org/trac/ompi/ticket/2268
- Updated date in copyright header of each source file
VT configure fixes:
- fixed configure's version detection for PAPI to support version 4.x
- added configure tests to detect Bull MPICH2
VT new features:
- added support for "re-locate" an existing VampirTrace? installation without re-build it from source (fixes OMPI's ticket #1990)
- added support for tracing functions in shared libraries instrumented by the GNU, Intel, Pathscale, ot PGI 9 compiler
- added support for PAPI-C counters which belong to different components
- extended usability of environment variable VT_METRICS for PAPI counters to specifiy whether a counter provides increasing or absolute values
This commit was SVN r22637.
continuation mark in column 6 is enough to split the lines, we do
the same continuation mark in column 73.
Now, while that would fit any msg., this would produce warnings when
including mpif-config.h with -Wall in gfortran and -warn in ifort.
Just get the SVN Version string short and forget it. Let's see
make check choke on that.
This additionally fixes the HG version string...
(Will mention this in ticket #2259)
This commit was SVN r22620.
tests ;-)) Turn them off again, didn't have time to look into them
Also, the test-program on eddie.osl.iu.edu, detects the rpc_pipefs
mounted on /var/lib/nfs/rpc_pipefs, required for NFS.
This commit was SVN r22607.
If file does not exist, check the directory it lives in...
Maybe used by caller, trying to open mmap() on NFS, Lustre or
Panasas (thanks Sam).
For now, this is used to warn about the usage of mmap on such FS.
Please note, that Ralph mentioned the orte_no_session_dir parameter.
The help message includes a reference to this.
Tested on NFS and Lustre on Linux on
smoky: mpirun --mca orte_tmpdir_base $HOME/tmp -np 2 ./mpi_stub
jaguar: mpirun ... --mca orte_tmpdir_base /tmp/work/$USER ...
Fixes trac:1354
This should cmr:v1.5 once it has soaked and is shown to work on
Solaris
This commit was SVN r22604.
The following Trac tickets were found above:
Ticket 1354 --> https://svn.open-mpi.org/trac/ompi/ticket/1354
anything for non-MPI apps. Oops! (But before you freak out, gentle
reader, note that mpi_paffinity_alone for MPI apps still worked fine)
When we made the switchover somewhere in the 1.3 series to have the
orted's do processor binding, then stuff like:
mpirun --mca mpi_paffinity_alone 1 hostname
should have bound hostname to processor 0. But it didn't because of a
subtle startup ordering issue: the MCA param registration for
opal_paffinity_alone was in the paffinity base (vs. being in
opal/runtime/opal_params.c), but it didn't actually get registered
until after the global variable opal_paffinity_alone was checked to
see if we wanted old-style affinity bindings. Oops.
However, for MPI apps, even though the orted didn't do the binding,
ompi_mpi_init() would notice that opal_paffinity_alone was set, yet
the process didn't seem to be bound. So the MPI process would bind
itself (this was done to support the running-without-orteds
scenarios). Hence, MPI apps still obeyed mpi_paffinity_alone
semantics.
But note that the error described above caused the new mpirun switch
--report-bindings to not work with mpi_paffinity_alone=1, meaning that
the orted would not report the bindings when mpi_paffinity_alone was
set to 1 (it ''did'' correctly report bindings if you used
--bind-to-core or one of the other binding options).
This commit separates out the paffinity base MCA param registration
into a small function that can be called at the Right place during the
startup sequence.
This commit was SVN r22602.
long-standing bugs (see trac ticket list below). They're currently
somewhat obscure bugs, but are becoming much more relevant in a world
where OpenFabrics devices fail and you replace them with a newer model
(i.e., the cluster is homogeneous... ''except'' for where you had to
replace one or two OpenFabrics devices, and the same model is no
longer available).
This commit includes a '''lengthy''' comment (that we spent a lot of
time writing!) about what exactly it does and does not do. The
previous code was rather short and '''incredibly''' subtle. The new
code is slightly longer, but is both much more explicit and much more
painstakingly documented.
This commit fixes multiple trac tickets. The real one that we fix is
#1707; the others are fixed as a side-effect. In short: fixing #1707
prevents Bad Things from happening later in the startup sequence.
Fixes trac:1707, #2164, #1574.
cmr:v1.4.2:reviewer=pasha
cmr:v1.5:reviewer=pasha
This commit was SVN r22592.
The following Trac tickets were found above:
Ticket 1707 --> https://svn.open-mpi.org/trac/ompi/ticket/1707
