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Граф коммитов

471 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
895edd04f8 Fix CID 468: remove some dead code. r_proc_list was set to NULL but
never used.

This commit was SVN r20272.
2009-01-14 18:15:17 +00:00
Jeff Squyres
1bedf18305 OMPI_DECLSPEC is no longer necessary when it's static. Duh.
This commit was SVN r20254.
2009-01-13 15:09:16 +00:00
Jeff Squyres
34b7b6cfe8 Really fixes trac:623: there still is a difference between MPI::SEEK_SET
and ::SEEK_SET (duh); that's why it's listed in constants.h.  So put
that back and make it (static const int) rather than extern, and then
remove the instantiation from mpicxx.cc.  Ditto for the other 2.

This commit was SVN r20251.

The following Trac tickets were found above:
  Ticket 623 --> https://svn.open-mpi.org/trac/ompi/ticket/623
2009-01-12 22:06:16 +00:00
Jeff Squyres
20831c36d2 Fixes trac:623: we changed SEEK_SET (and friends) to be (static const int)
in mpicxx.h a while ago, but somehow accidentally left "extern const
int" for SEEK_SET (and friends) in constants.h.  This commit removes
the extraneous "extern" versions.

This commit was SVN r20250.

The following Trac tickets were found above:
  Ticket 623 --> https://svn.open-mpi.org/trac/ompi/ticket/623
2009-01-12 21:50:50 +00:00
Jeff Squyres
d1c6f3f89a * Fix a truckload of Cisco copyrights to be the same as the rest of
the code base.
 * Fix a few misspellings in other copyrights.

This commit was SVN r20241.
2009-01-11 02:30:00 +00:00
Jeff Squyres
a9850c96c5 Cosmetic change.
This commit was SVN r20203.
2009-01-05 19:07:06 +00:00
Jeff Squyres
611ebeab33 Cosmetic: expunge some more old 2-space-indent code (re-indent with
"indent(1)").

This commit was SVN r20179.
2009-01-02 12:55:17 +00:00
Jeff Squyres
2f94a151e1 Fix a const cast.
This commit was SVN r20146.
2008-12-17 15:29:02 +00:00
Nysal Jan
ee8ec6f6b5 Remove dead/redundant code. Minimize number of calloc invocations
This commit was SVN r20121.
2008-12-12 10:55:50 +00:00
Shiqing Fan
a5281f0434 - 1/4 commit for Windows Visual Studio and CCP support:
CMakeLists and .windows files.
  In contribs preconfigured and precompiled parts.

This commit was SVN r20108.
2008-12-10 20:59:20 +00:00
George Bosilca
df13c2810d Undo the last commit related to the Fortran profiling. After spending few hours
pondering about this problem, we came to the conclusion that the best approach
is to keep what we had before (i.e. the original approach).

The main reason for this is being nice with tool developers. In the current
incarnation, they can either catch the Fortran calls or the C calls. If they
provide both, then they will have to figure out how to cope with the double
calls (as your example highlight).

Here is the behavior Open MPI will stick too:
Fortran MPI  -> C MPI
Fortran PMPI -> C MPI

However, the is another possible approach. This might avoid the double calls
while preserving the tool writers friendliness. This possible approach will do:
   Fortran MPI  -> C MPI
   Fortran PMPI -> C PMPI
                     ^
Unfortunately, we will have to heavily modify all files in the Fortran
interface layer in order to support this approach.

This commit was SVN r20079.
2008-12-06 00:35:32 +00:00
George Bosilca
54d9df317f Fix the Fortran profiling layer to insure that we call the C PMPI_ functions instead of
their MPI_ counterpart. This allow the profiling layer to catch each MPI function only once,
from C and Fortran.

This commit was SVN r20076.
2008-12-05 16:52:25 +00:00
Shiqing Fan
d06604c258 Get rid of the compiler warning message when --enable-picky is used.
Do the checks according to inter/intracommunicator flags.

This commit was SVN r20063.
2008-12-03 17:44:21 +00:00
Shiqing Fan
abd21b6d17 - An update for memchecker :
1. fix a bug in pml_ob1_recvreq/sendreq.c, buffer was made defined where the request has already been released.
2. complete memchecker support for collective functions.
3. change the wrongly spelled function name of memchecker, i.e. '*_isaddressible' should be '*_isaddressable'

This commit was SVN r20043.
2008-11-27 16:34:02 +00:00
Shiqing Fan
4d2c118d3b - fix a type cast. The whole libmpi library has to be compiled as CXX on Windows, and MS compiler recognizes this as an error.
This commit was SVN r20012.
2008-11-17 12:18:01 +00:00
George Bosilca
82d1d5d785 The patch for "Unexpected message queue for unknown CID's required" ticket #1460.
I'm unable to split it in two parts, my patch and Edgar's one. So I just update
copyright information for both of us.
What this patch do:
- it use the unexpected queue create by commit r19562 to dispatch the
  unexpected message to the right communicator (once this communicator
  is created and initialized).
- delay the PML comm_add until we have the context_id for the new communicator.
- only do the PML comm_add on processes that really belong to the new
  communicator. Please read the lengthy comment in the source code for the
  reason behind this.

This commit was SVN r19929.

The following SVN revision numbers were found above:
  r19562 --> open-mpi/ompi@acd3406aa7
2008-11-04 21:58:06 +00:00
Jeff Squyres
57a3dce9ba LANL noticed that calling MPI_ABORT invokes opal_output(0, ...)
unconditionally, which can result in a flood of messages to the user
if all MPI processes invoke abort.  Additionally, some users were
confused because they saw the MPI_ABORT opal_output() messages from
''some'' MPI processes, but not ''all'' of them (despite the fact that
every MPI process supposedly invoked MPI_ABORT).  The reason is that
calling MPI_ABORT triggers ORTE to kill all MPI processes, so it's a
race condition as to whether a) all MPI processes actually invoke
MPI_ABORT, and/or b) whether every process is able to opal_output()
before they are killed.

This commit does two simple things:
 * Now use orte_show_help() for the MPI_ABORT message, so they are
   aggregated. 
 * Add a note in the message that calling MPI_ABORT kills all
   processes, so you might not see all output, yadda yadda yadda.

This commit was SVN r19735.
2008-10-14 19:23:03 +00:00
Jeff Squyres
d0a8be6d2f Fix CID 1117: ensure to check return values.
This commit was SVN r19583.
2008-09-19 13:27:30 +00:00
Rolf vandeVaart
1ad9d0459e Add a check for LOCK_SHARED in the sys/synch.h file. If it exists then smash it to avoid problems with preprocessor and C++.
This fixes trac:1477.

Help provided by Jeff and Terry.

This commit was SVN r19533.

The following Trac tickets were found above:
  Ticket 1477 --> https://svn.open-mpi.org/trac/ompi/ticket/1477
2008-09-10 12:58:30 +00:00
Jeff Squyres
1382b29aa3 Add the MPI::Comm::Call_errhandler() function (it was previously
missing!).  Fixes trac:1483.

This commit was SVN r19503.

The following Trac tickets were found above:
  Ticket 1483 --> https://svn.open-mpi.org/trac/ompi/ticket/1483
2008-09-05 12:26:06 +00:00
Nysal Jan
4b68803260 Should be coords(i) >= dims(i)
Refs trac:1463

This commit was SVN r19500.

The following Trac tickets were found above:
  Ticket 1463 --> https://svn.open-mpi.org/trac/ompi/ticket/1463
2008-09-05 04:20:48 +00:00
Jeff Squyres
46da10ff08 An optimization/improvement from our old way of providing
MPI::SEEK_SET and friends, suggested by Doug Gregor.  This way allows
users to utilize SEEK_SET in a case statement, which they could not do
with our previous method.

This commit was SVN r19494.
2008-09-04 15:02:52 +00:00
Jeff Squyres
9a98423bbc [Re-]Fix #1463 with a little thing that I like to call "the right
way".

Don't modify coords in the top-level API function because coords is an
IN variable.  Instead, as Nysal noted, the real cause of the problem
was a missing ! down in topo_base_cart_rank.c.  Put a comment down in
topo_base_cart_rank.c explaining what's going on so that the code is
not so cryptic.

Refs trac:1363.

This commit was SVN r19487.

The following Trac tickets were found above:
  Ticket 1363 --> https://svn.open-mpi.org/trac/ompi/ticket/1363
2008-09-03 08:24:27 +00:00
Jeff Squyres
008fa8c5cc Fixes trac:1236, #1237.
* Various changes to enable 0-dimensional cartesian communicators:
   * Set various mtc_* members to NULL when there are 0 dimensions (and
     don't bother trying to memcpy these arrays when duplicating the
     communicator -- because they're NULL)
   * adjust topo_base_cart_sub to correctly handle 0 dimensions
     (simplified it a bit)
   * adjust a few error codes to return ERR_OUT_OF_RESOURCE
   * adjust error checking of CART_CREATE, CART_RANK
 * Allow MPI_GRAPH_CREATE to accept 0 == nnodes.
 * Bump reported MPI version in mpi.h to 2.1

This commit was SVN r19461.

The following Trac tickets were found above:
  Ticket 1236 --> https://svn.open-mpi.org/trac/ompi/ticket/1236
2008-08-31 19:31:10 +00:00
Jeff Squyres
59cb626b7c Fixes trac:1463: ensure periodic dimensions are handled proprly for
MPI_CART_RANK. 

This commit was SVN r19459.

The following Trac tickets were found above:
  Ticket 1463 --> https://svn.open-mpi.org/trac/ompi/ticket/1463
2008-08-31 18:39:05 +00:00
George Bosilca
697dc524c1 Deal with the ticket #1239 and #712. This will upgrade the Open MPI support
for the F90 type create functions to the requirements of MPI 2.1 standard.

Advice to implementors. An application may often repeat a call to
MPI_TYPE_CREATE_F90_xxxx with the same combination of (xxxx,p,r).
The application is not allowed to free the returned predefined, unnamed
datatype handles. To prevent the creation of a potentially huge amount of
handles, the MPI implementation should return the same datatype handle for
the same (REAL/COMPLEX/INTEGER,p,r) combination. Checking for the
combination (p,r) in the preceding call to MPI_TYPE_CREATE_F90_xxxx and
using a hash-table to find formerly generated handles should limit the
overhead of finding a previously generated datatype with same combination
of (xxxx,p,r). (End of advice to implementors.)

This commit fixes trac:1239, and #712.

This commit was SVN r19458.

The following Trac tickets were found above:
  Ticket 1239 --> https://svn.open-mpi.org/trac/ompi/ticket/1239
2008-08-31 18:36:32 +00:00
Jeff Squyres
0d618b519f Fix MPI::IN_PLACE to be (void* const). Fixes trac:1465.
This commit was SVN r19420.

The following Trac tickets were found above:
  Ticket 1465 --> https://svn.open-mpi.org/trac/ompi/ticket/1465
2008-08-26 17:36:08 +00:00
George Bosilca
6982e8ecbc Don't forget to release the temporary arrays used for converting
the datatypes from Fortran to C.

This commit was SVN r19314.
2008-08-17 21:57:59 +00:00
Jeff Squyres
fc7e5f1c0d Fix CID 1095: ensure to initialize the File
This commit was SVN r19252.
2008-08-12 13:13:02 +00:00
Jeff Squyres
93746cd594 Fixed CID 807: Remove unused variable
This commit was SVN r19239.
2008-08-11 20:50:09 +00:00
Jeff Squyres
76b4040fbf Fix CIDs 830, 831, 858: minor resource leaks on error
This commit was SVN r19237.
2008-08-11 20:40:04 +00:00
Jeff Squyres
fa25de320e Fixes CIDs 421, 422, 423, 424, 425 426
Possibly fixes CID 417

 * ensure to initialize inner members upon default constructors using
   the same syntax across all classes
 * remove some member variables that aren't used anymore
 * "initialize" the inner MPI_Status in the default constructor for
   MPI::Status by calling the default constructor mpi_status().  This
   may or may not silence CID 417; we'll see what happens in
   subsequent Coverity Prevent runs.

This commit was SVN r19228.
2008-08-08 13:49:44 +00:00
Jeff Squyres
797ec531aa Some more work on the man pages:
* Make the creation of the build dir for the man pages a bit more
   robust (thanks to suggestions from Ralf W.).
 * Only distribute the .Xin files, not the .X man pages themselves.
 * Make the .X files depend on opal_config.h so that if you re-run
   configure and change opal_config.h (e.g., a new version), the man
   pages should get rebuilt.
 * Man pages are now cleaned with "distclean", not "maintainer-clean".
 * Fix a typo in opal_crs.7in.
 * Udpate make_dist_tarball to update "date" in the VERSION file.
 * Make make_dist_tarball a bit friendlier to hg checkouts.

This commit was SVN r19219.
2008-08-07 19:20:40 +00:00
Rolf vandeVaart
e105b3f254 Finish work related to ticket #1392 where the versions
were bumped from v1.0.0 to v2.0.0.  

This change fixed #1439.

This commit was SVN r19175.
2008-08-06 12:16:54 +00:00
Rainer Keller
82580701fb - We may know the *_name is < MPI_MAX_OBJECT_NAME; Prevent does not.
Fix Coverity issues CID1068 and CID1069

This commit was SVN r19167.
2008-08-06 07:59:59 +00:00
Ralph Castain
5a2053ade2 Per July technical meeting:
Revise the scope precedence in the MPI_Publish, Unpublish, and Lookup functions. If a global server was specified and is available, then default to using it for all three functions. If not, then default to using local scope.

If an info_key was provided, then it takes preference. We always follow the user's direction - this change only impacts the scope ordering if the user -doesn't- tell us the order to use.

This commit was SVN r19146.
2008-08-04 16:43:12 +00:00
Jeff Squyres
8d5bcf9257 Fix a bunch of double quote issues
This commit was SVN r19140.
2008-08-04 15:13:29 +00:00
Dan Lacher
9175da1e02 Putback for all changes to automate man page updates to strings of
versions, dates and build names.

Fixes trac:1387

Big thanks to Jeff and Brian for help and oversight.

This commit was SVN r19120.

The following Trac tickets were found above:
  Ticket 1387 --> https://svn.open-mpi.org/trac/ompi/ticket/1387
2008-08-01 21:14:37 +00:00
Jeff Squyres
5ac6a4387c Fix MPI_CART_GET to take an array of logicals for the periods argument
(not integers)

This commit was SVN r19099.
2008-07-30 20:29:23 +00:00
Ralph Castain
a0ae63f19e Ensure we call close_port after comm_spawn[_multiple]. Cleanout the port name in close_port
This commit was SVN r19068.
2008-07-28 16:40:11 +00:00
Jeff Squyres
477cdb0b62 Had to abondon the first approach from r19040: it caused problems with
"make distclean".  It's not clear whether it's an Automake bug or
whether what I did simply is not supported (I've got pending mail into
Ralf W. asking about it).  The short version is that during "make
distclean", ompi/mpi/f77/Makefile would rm -rf ompi/mpi/f77/.deps.
But ompi/Makefile still include's some .Plo files from that directory,
so Bad Things happened when "make distclean" unrolled from the
ompi/mpi/f77 dir back up to the ompi/ dir.

So I went with George's original suggestion and moved the f77 "base"
files in question into a new directory: ompi/mpi/f77/base and put a
Makefile.include in there.  That way, this directory is not traversed
twice by distclean, and .deps is only removed when it is supposed to
be.  Maybe we'll be able to do it a little better someday, but that's
the way it is now.

I'll check this with a fresh checkout once this is committed to SVN as
well; some of these kinds of problems don't show up until you do a
build from a completely fresh SVN checkout.

This commit was SVN r19054.

The following SVN revision numbers were found above:
  r19040 --> open-mpi/ompi@9f4d4c4312
2008-07-26 20:38:30 +00:00
Jeff Squyres
9f4d4c4312 Fixes trac:1409: ensure that the C++, F77, and F90 bindings libraries
are properly linked against libmpi.la.

This required a little creative AM usage, inspired by discussion on
OMPI devel list:

 * Make a new ompi/mpi/f77/Makefile_f77base.include; effectively move
   the building of the f77 "base" glue stuff (libmpi_f77base.la) into
   this Makefile and away from ompi/mpi/f77/Makefile.am.  The sources
   in question require some specific CPPFLAGS, so we couldn't just add
   the raw sources into libmpi_la_SOURCES, unfortunately.
 * Include this new Makefile in the top-level ompi/Makefile.am
 * The libmpi_f77base.la LT convenience library was already sucked
   into libmpi.la; breaking it out into its own Makefile allows us
   to build it earlier and therefore complete buidling libmpi.la
   earlier.
 * Side effect: the ompi/mpi/Makefile.am is now mostly unnecessary; it
   no longer specifies a SUBDIRS for each of the bindings directories
   to traverse into (since they are now in the top-level SUBDIRS).  As
   such, the man pages are now also now included in the top-level
   ompi/Makefile.am.

The end of the result is that libmpi.la -- including a few sources
from mpi/f77 -- is fully built before the C++, F77, and F90 bindings
are built.  Therefore, the C++, F77, and F90 bindings libraries can
all link against libmpi.la.

This commit was SVN r19040.

The following Trac tickets were found above:
  Ticket 1409 --> https://svn.open-mpi.org/trac/ompi/ticket/1409
2008-07-25 21:18:05 +00:00
Ralph Castain
3137ed9255 Update the manpages for comm_spawn(_multiple) - add man page to explain host/hostfile behavior
This commit was SVN r18961.
2008-07-21 17:58:12 +00:00
Ralph Castain
0abf5225a8 Update the man pages for MPI_Publish, MPI_Unpublish, MPI_Lookup, and MPI_Comm_spawn to cover scoping rules and new info keys
This commit was SVN r18891.
2008-07-11 19:09:50 +00:00
Jeff Squyres
74aa9689e4 From an initial patch from George, update all the set/get errhandler
functions to use atomics in order to be thread safe.

This commit was SVN r18807.
2008-07-03 19:28:02 +00:00
Jeff Squyres
51d833e8d1 Minor fixes and comment clarifications for MPI-2.1-mandated handling
of strings.  We mostly did the Right Things already; I simplified the
code a bit and also had us not write to more characters in the C
bindings than we're supposed to (per language in the MPI-2.1 spec).

Fixes trac:1238.

This commit was SVN r18705.

The following Trac tickets were found above:
  Ticket 1238 --> https://svn.open-mpi.org/trac/ompi/ticket/1238
2008-06-21 19:33:47 +00:00
Jeff Squyres
f366f49179 Remove some leftover kruft; the STL is no longer used, so this lock is
no longer necessary.

This commit was SVN r18694.
2008-06-20 13:39:26 +00:00
Jeff Squyres
7a1206d912 Two more minor changes:
* Put the variable in the MPI namespace; keeps it safely segregated
   from user apps
 * Need to actually "extern" the variable to make the compiler not
   complain that the variable is never referenced

This commit was SVN r18693.
2008-06-20 13:36:02 +00:00
Jeff Squyres
a884eebdf1 This warning has been bugging me in MTT nightly runs for forever: make
the char string ident in the C++ library be non-static so that other
places can see it.  This makes the C++ library version string
analogous to all the other version strings.

This commit was SVN r18679.
2008-06-19 14:40:37 +00:00
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00