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117 Коммитов

Автор SHA1 Сообщение Дата
George Bosilca
2589e55a75 item_in_tree is only used in debug mode, so protect it.
This commit was SVN r25548.
2011-11-29 23:48:26 +00:00
Rainer Keller
4e6a6fc146 - Check, whether the compiler supports __builtin_clz (count leading
zeroes);
   if so, use it for bit-operations like opal_cube_dim and opal_hibit.
   Implement two versions of power-of-two.
   In case of opal_next_poweroftwo, this reduces the average execution
   time from 83 cycles to 4 cycles (Intel Nehalem, icc, -O2, inlining,
   measured rdtsc, with loop over 2^27 values).
   Numbers for other functions are similar (but of course heavily depend
   on the usage, e.g. opal_hibit() with a start of 4 does not save
   much).  The bsr instruction on AMD Opteron is also not as fast.

 - Replace various places where the next power-of-two is computed.
   
   Tested on Intel Nehalem Cluster with openib, compilers GNU-4.6.1 and
   Intel-12.0.4 using mpi_testsuite -t "Collective" with 128 processes.

This commit was SVN r25270.
2011-10-11 22:49:01 +00:00
Ralph Castain
9244ea10fb Provide a way to look at the head of the ring
This commit was SVN r24832.
2011-06-28 19:46:48 +00:00
Josh Hursey
8cd5280299 Some assorted opal_bitmap extensions
* Protect the '->bitmap' field if init() is called more than once [it shouldn't be, but if it is then this avoids a memory leak].
 * Some new functions
   * opal_bitmap_bitwise_and_inplace
   * opal_bitmap_bitwise_or_inplace
   * opal_bitmap_bitwise_xor_inplace
   * opal_bitmap_are_different
   * opal_bitmap_get_string

Adding these features to the trunk so others have access to them if they need them. A couple off trunk branches make use of them.

This commit was SVN r24767.
2011-06-09 14:43:54 +00:00
Terry Dontje
266e663091 Add opal_tree class. This will be used in the future by sysinfo to store hw maps to be used by rmaps for the new affinity code.
This commit was SVN r24594.
2011-03-30 08:05:28 +00:00
Eugene Loh
2770a12beb Continue clean up of thread options started in r22841, 22842, and 22849.
No need for any CMRs to 1.5... that was already done in CMR 2728.

This commit was SVN r24545.

The following SVN revision numbers were found above:
  r22841 --> open-mpi/ompi@b400b84162
2011-03-18 21:36:35 +00:00
Ralph Castain
b09f57b03d Update the multicast subsystem - ported from Cisco branch
This commit was SVN r24246.
2011-01-13 01:54:05 +00:00
George Bosilca
bb412a5ff7 Indentation.
This commit was SVN r24148.
2010-12-03 19:13:57 +00:00
Ralph Castain
0ed98967ed Update the thread protection in the ring_buffer class
This commit was SVN r23532.
2010-07-29 02:12:44 +00:00
Jeff Squyres
c8bb7537e7 Remove include/opal/sys/cache.h -- its only purpose in life was to
#define CACHE_LINE_SIZE to 128.  This name has a conflict on NetBSD,
and it seems kinda odd to have a header file that ''only'' defines a
single value.  Also, we'll soon be raising hwloc to be a first-class
item, so having this file around seemed kinda weird.

Therefore, I replaced CACHE_LINE_SIZE with opal_cache_line_size, an
int (in opal/runtime/opal_init.c and opal/runtime/opal.h) on the
rationale that we can fill this in at runtime with hwloc info (trunk
and v1.5/beyond, only).  The only place we ''needed'' a compile-time
CACHE_LINE_SIZE was in the BTL SM (for struct padding), so I made a
new BTL_SM_ preprocessor macro with the old CACHE_LINE_SIZE value
(128).  That use isn't suitable for run-time hwloc information,
anyway.

This commit was SVN r23349.
2010-07-06 14:33:36 +00:00
Christopher Yeoh
cd5294944b fixes trac:2355 - race in opal_atomic_lifo
Adds memory barriers to remove race condition which can
occur on PowerPC architectures (and probably others)

This commit was SVN r22880.

The following Trac tickets were found above:
  Ticket 2355 --> https://svn.open-mpi.org/trac/ompi/ticket/2355
2010-03-25 03:44:38 +00:00
Shiqing Fan
0b765637d9 A type cast.
This commit was SVN r22618.
2010-02-15 10:26:02 +00:00
Ralph Castain
7a1b2a706e Add a new ring_buffer class
This commit was SVN r22615.
2010-02-14 19:20:19 +00:00
Ralph Castain
db1b07c02c In multiple places in the code base, we expect opal_bitmap_is_set_bit to return either true or false...not a negative error code. If the index is out of range, this is effectively a "false" condition as the bit was clearly not set by the program.
This revision is consistent with how the function was called in the OMPI code base. Will fix the test to match.

This commit was SVN r22544.
2010-02-03 19:45:22 +00:00
Ralph Castain
f966d9f972 Fix visibility issues with opal_graph functions.
Fix the carto test so it can compile - need to update input file so it can run

This commit was SVN r21403.
2009-06-09 15:02:57 +00:00
Rainer Keller
b572dc3591 - As discussed revert r21330, Fortran-configure info should
not end up in OPAL
 - Will post an updated patch for the OMPI_ALIGNMENT_ parts (within C).

This commit was SVN r21342.

The following SVN revision numbers were found above:
  r21330 --> open-mpi/ompi@95596d1814
2009-06-01 19:02:34 +00:00
Rainer Keller
95596d1814 - Move alignment and size output generated by configure-tests
into the OPAL namespace, eliminating cases like opal/util/arch.c
   testing for ompi_fortran_logical_t.
   As this is processor- and compiler-related information
   (e.g. does the compiler/architecture support REAL*16)
   this should have been on the OPAL layer.
 - Unifies f77 code using MPI_Flogical instead of opal_fortran_logical_t

 - Tested locally (Linux/x86-64) with mpich and intel testsuite
   but would like to get this week-ends MTT output


 - PLEASE NOTE: configure-internal macro-names and
   ompi_cv_ variables have not been changed, so that
   external platform (not in contrib/) files still work.

This commit was SVN r21330.
2009-05-30 15:54:29 +00:00
Josh Hursey
ec6c5bf5e9 Make sure that when we destruct the pointer array that we set the address to NULL and size to 0. This will help to flag accidental usage of a destructed pointer array object.
This commit was SVN r21216.
2009-05-12 14:13:07 +00:00
Greg Koenig
60485ff95f This is a very large change to rename several #define values from
OMPI_* to OPAL_*.  This allows opal layer to be used more independent
from the whole of ompi.

NOTE: 9 "svn mv" operations immediately follow this commit.

This commit was SVN r21180.
2009-05-06 20:11:28 +00:00
Rainer Keller
221fb9dbca ... Delayed due to notifier commits earlier this day ...
- Delete unnecessary header files using
   contrib/check_unnecessary_headers.sh after applying
   patches, that include headers, being "lost" due to
   inclusion in one of the now deleted headers...

   In total 817 files are touched.
   In ompi/mpi/c/ header files are moved up into the actual c-file,
   where necessary (these are the only additional #include),
   otherwise it is only deletions of #include (apart from the above
   additions required due to notifier...)

 - To get different MCAs (OpenIB, TM, ALPS), an earlier version was
   successfully compiled (yesterday) on:
   Linux locally using intel-11, gcc-4.3.2 and gcc-SVN + warnings enabled
   Smoky cluster (x86-64 running Linux) using PGI-8.0.2 + warnings enabled
   Lens cluster (x86-64 running Linux) using Pathscale-3.2 + warnings enabled

This commit was SVN r21096.
2009-04-29 01:32:14 +00:00
Rainer Keller
a3c3babe01 - Ewww, r20817 messed up PGI on Jaguar big time!
Now, while #include "ompi_config.h" is good and fine in order
   to have OMPI_DECLSPEC,
   here it led to stdint.h (with the uint8_t) being included early
   but INSIDE a namespace "MPI" {}.
   Of course it was included anymore (thinkg #define _STDINT_H), when
   it was required in opal/class/opal_hash_list.h
   NOT good.

 - opal/class/opal_object.h: Yeah, one can have nested extern "C" {}
   but it's not necessary. Instead just have the outer *_C_DECLS.

This commit was SVN r20837.

The following SVN revision numbers were found above:
  r20817 --> open-mpi/ompi@6f808d9b05
2009-03-21 01:37:38 +00:00
Rainer Keller
be66cc2279 - We're using uint16_t, uint32_t, and friends,
so #include <stdint.h> if we have it...

This commit was SVN r20835.
2009-03-21 01:26:27 +00:00
Rainer Keller
481b801720 - In opal/class/opal_object.h we don't have the extern "C" {
Use BEGIN_C_DECLS/END_C_DECLS
 - Adapt the other headers as well

This commit was SVN r20802.
2009-03-17 15:11:48 +00:00
Rainer Keller
fd28b392bf - An intrusive commit yet again (sorry): with the separation we
get bitten by header depending on having already included
   the corresponding [opal|orte|ompi]_config.h header.
   When separating, things like [OPAL|ORTE|OMPI]_DECLSPEC
   are missed.

   Script to add the corresponding header in front of all following
   (taking care of possible #ifdef HAVE_...)

 - Including some minor cleanups to
   - ompi/group/group.h -- include _after_ #ifndef OMPI_GROUP_H
   - ompi/mca/btl/btl.h -- nclude _after_ #ifndef MCA_BTL_H
   - ompi/mca/crcp/bkmrk/crcp_bkmrk_btl.c -- still no need for
     orte/util/output.h
   - ompi/mca/pml/dr/pml_dr_recvreq.c -- no need for mpool.h
   - ompi/mca/btl/btl.h -- reorder to fit
   - ompi/mca/bml/bml.h -- reorder to fit
   - ompi/runtime/ompi_mpi_finalize.c -- reorder to fit
   - ompi/request/request.h -- additionally need ompi/constants.h

 - Tested on linux/x86-64

This commit was SVN r20720.
2009-03-04 15:35:54 +00:00
Rainer Keller
d68a8a1904 - Now that we don't need it anymore, blast away
ompi/class/ompi_bitmap.[ch] -- may always be restored from svn
   again...

This commit was SVN r20710.
2009-03-04 00:28:58 +00:00
Rainer Keller
811f2bd9b4 - As discussed on RFC, move the ompi_bitmap to the
opal layer.
   Add a check against a maximum (actually get rid of ifs internally to
   opal_bitmap.c) -- the functionality to set the current maximum size
   opal_bitmap_set_max_size() is currently only used in attribute.c
   to set the maximum OMPI_FORTRAN_HANDLE_MAX...

   Tested on linux/x86-64 with intel-tests with all_tests_no_perf_f
   run with 6 procs.
   Let's look into MTT as well...

This commit was SVN r20708.
2009-03-03 22:25:13 +00:00
Rainer Keller
64aa384745 - Fix comment to reflect current code.
This commit was SVN r20479.
2009-02-09 00:52:57 +00:00
Ralph Castain
c92f906d7c Move the daemon collectives out of the ODLS and into the GRPCOMM framework. This removes the inherent assumption that the OOB topology is a tree, thus allowing different grpcomm/routed combinations to implement collectives appropriate to their topology.
This commit was SVN r20357.
2009-01-27 19:13:56 +00:00
George Bosilca
83474b2e1a Solve a modulus rounding error. As the modulus can be signed (in C89 it take
the sign of the divident), we have to cast the pointer to an uintptr_t in
order to be able to correctly compute how to align it on the cache line.
Rported and solved by Stephan Kramer. Thanks Stephan.

This commit was SVN r19778.
2008-10-21 17:00:39 +00:00
Ralph Castain
15c47a2473 Revise the daemon collective system to handle comm_spawn patterns that cross into new nodes that are not direct children on the routing tree of the HNP.
Refers to ticket #1548. Although this appears to fix the problem, the ticket will be held open pending further test prior to transition to the 1.3 branch.

This commit was SVN r19674.
2008-10-02 20:08:27 +00:00
George Bosilca
ac0160dcd1 Don't forget to decrease the number of empty slots.
This commit was SVN r19243.
2008-08-11 23:39:09 +00:00
Adrian Knoth
5096512c3a Cosmetics, only typos.
This commit was SVN r19061.
2008-07-28 13:33:08 +00:00
Jeff Squyres
e2b08aaca4 Fix bad free's found in CID 707 and CID 708.
This commit was SVN r18600.
2008-06-05 20:49:33 +00:00
Ralph Castain
7c7b9b0486 Do a little cleanup on the opal graph class and opal carto framework to conform to OMPI naming conventions and avoid potential conflict with user applications - no change in functionality, passes carto test program
This commit was SVN r18407.
2008-05-07 19:33:49 +00:00
Sharon Melamed
afa98f92e8 Changed the for loop to a while loop so I could
release the edge without conflicting with get next.

This commit was SVN r17979.
2008-03-26 14:45:45 +00:00
Tim Prins
84b2099fe8 Remove the now-unused orte_value_array. As this is the last 'class' split between orte and ompi, remove the big comment about the split in ompi_bitmap.
Also, update some properties (source files should not be executeable...), and remove a couple unneeded inclusions of orte_proc_table.h

This commit was SVN r17655.
2008-02-28 21:39:42 +00:00
George Bosilca
9d421bea2a Replace all occurences of orte_pointer_array by opal_pointer_array. Remove the
implementation of orte_pointer_array.

This commit was SVN r17636.
2008-02-28 05:32:23 +00:00
George Bosilca
7b1132b623 Remove some warnings about uninitialized variables (the code was correct but
the compilers are not yet that smart).
Add the dependency to output.h in order to be able to use opal_output.

This commit was SVN r17195.
2008-01-24 00:39:24 +00:00
Sharon Melamed
025b68becf Move the carto framework to the trunk.
This commit was SVN r17177.
2008-01-23 09:20:34 +00:00
Jeff Squyres
cc3805d861 Because opal_list is used in the C++ bindings, where not having
"const" in the argument creates [correct] warnings (because __FILE__
is a (const char*)).  Plus, opal_object.cls_init_file_name is already
(const char*).

This commit was SVN r17145.
2008-01-15 23:50:30 +00:00
Jeff Squyres
95fa693273 In r17007, ompi_pointer_array.c the logic from the
ompi_pointer_array.c:ompi_pointer_array_set_item() was slightly
changed such that the "find the next open slot when the requested
index was already open" logic was no longer right -- since the new
lowest_free value is not set until ''after'' we look for the next open
slot, we need to start searching for the new lowest_free slot at the
(index+1) position (not the index position).

This commit was SVN r17021.

The following SVN revision numbers were found above:
  r17007 --> open-mpi/ompi@906e8bf1d1
2007-12-21 20:19:55 +00:00
Ralph Castain
401dc49686 Cleanup compiler warnings about comparing signed and unsigned values
This commit was SVN r17011.
2007-12-21 14:22:27 +00:00
George Bosilca
906e8bf1d1 Replace the ompi_pointer_array with opal_pointer_array. The next step
(sometimes after the merge with the ORTE branch), the opal_pointer_array
will became the only pointer_array implementation (the orte_pointer_array
will be removed).

This commit was SVN r17007.
2007-12-21 06:02:00 +00:00
Gleb Natapov
140dce7614 Fix ABA problem in atomic_lifo code. This is temporary solution for now. We
are looking for a better one.

This commit was SVN r16091.
2007-09-11 15:40:30 +00:00
George Bosilca
629bacbb07 Don't include the atomic header file, if we're building a non threaded version.
This commit was SVN r15766.
2007-08-04 00:43:15 +00:00
George Bosilca
fce678c1d1 Pinpoint the usual execution path (add OPAL_LIKELY).
This commit was SVN r14337.
2007-04-12 06:18:01 +00:00
George Bosilca
633ee3c2ce Small optimizations in order to force the compiler to inline some critical functions.
This commit was SVN r14317.
2007-04-12 04:29:43 +00:00
Tim Prins
e09a154266 fix a buglet..
This commit was SVN r14259.
2007-04-07 18:27:39 +00:00
George Bosilca
cd5a4c6416 Save the ghost pointer once the element is initialized.
This commit was SVN r14189.
2007-04-01 16:18:48 +00:00
Tim Prins
bc1b046e33 Change a bunch of 'OMPI' names to OPAL names, since this is opal.
This commit was SVN r14165.
2007-03-29 01:00:33 +00:00