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Граф коммитов

101 Коммитов

Автор SHA1 Сообщение Дата
Gilles Gouaillardet
84643bc738 pmix/pmix4x: update .gitignore
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-04-22 09:54:34 +09:00
KAWASHIMA Takahiro
8bbd201029
Merge pull request #6205 from kawashima-fj/pr/fp16
Add FP16 datatypes
2019-02-08 14:52:13 +09:00
Ralph Castain
43244cf66e Ignore generated file
Signed-off-by: Ralph Castain <rhc@pmix.org>
2019-02-06 17:17:34 -08:00
KAWASHIMA Takahiro
c44599ec13 mpiext/shortfloat: Add shortfloat MPI extension
This extension provides additional MPI datatypes `MPIX_SHORT_FLOAT`,
`MPIX_C_SHORT_FLOAT_COMPLEX`, and `MPIX_CXX_SHORT_FLOAT_COMPLEX`
for `short float` (C/C++), `short float _Complex` (C), and
`std::complex<short float>` (C++), respectively, or their alternate
types like `_Float16`.

See `ompi/mpiext/shortfloat/README.txt` for details.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-01 13:01:14 +09:00
Gilles Gouaillardet
6dd8bb6e6c pmix: update git ignore
allow AUTHORS and contrib/perf_tools/Makefile from the embedded PMIx

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-12-28 12:57:15 +09:00
Ralph Castain
791bf3c2cd Update ignores
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-11-27 11:09:02 -08:00
Ralph Castain
466cad6cb2 Update master to PMIx v4
Retain ext3x for PMIx 3  compatibility
Get the blasted permissions correct on config files

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-09-13 08:24:17 -07:00
Ralph Castain
cfbb630243 Update ignores
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-08-03 08:51:36 -07:00
Ralph Castain
a32fc958f4 Add a bunch of missing ignores
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-07-25 16:13:08 -07:00
Gilles Gouaillardet
e609cf7bc3
Merge pull request #5337 from ggouaillardet/topic/generalized_requests
ompi/requests: implement generalized request extensions
2018-06-26 13:01:04 +09:00
KAWASHIMA Takahiro
a8da78eeaa
Merge pull request #4618 from ggouaillardet/topic/pcoll
Add the persistent collectives feature
2018-06-26 12:36:34 +09:00
Gilles Gouaillardet
1e5404873f io/romio321: update .gitignore
and remove two files that should have never been commited

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-06-26 10:52:17 +09:00
Ralph Castain
3b2390e5d5 Silence coverity warnings, remove/ignore build product
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-25 08:01:28 -07:00
Ralph Castain
cf895a73bb Ignore spc_example
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-16 16:29:10 -07:00
Ralph Castain
94794011f1 Silence warnings and ignore test binary
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-15 11:32:22 -07:00
KAWASHIMA Takahiro
a31a34fa71 Update .gitignore for Fortran MPI extensions files
Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-06-11 20:00:09 +09:00
KAWASHIMA Takahiro
545e9af896 mpiext/pcollreq: Add MPIX_Bcast_init etc.
Until the MPI Forum decides to add the persistent collective
communication request feature to the MPI Standard, these functions
are supported through MPI extensions with the `MPIX_` prefix.

Only C bindings are supported currently.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2018-06-11 17:22:16 +09:00
Ralph Castain
06eb51161f Rename prun ompi-prun
This is a minor abstraction break in naming, but hopefully acceptable for now. I will update the contents of the program a little later. This resolves the immediate issue of naming conflict with the PRRTE binary.

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-06-06 07:40:03 -07:00
Ralph Castain
6df6d6a7f3 Ignore new generated file
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
(cherry picked from commit 19d5e5ad57a1e724ed02c6cbb0b5cdf4aff2fac7)
2018-06-03 07:24:59 -07:00
Ralph Castain
02e19a1c4f Ignore generated file
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-02-13 07:30:00 -08:00
Gilles Gouaillardet
43700faba1 pmix/ext3x: remove autogenerated ext3x.h header file
This header file was meant to be autogenerated, and for
some reasons, was never removed from the repository.
Update .gitignore as well

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2018-01-31 23:45:42 +09:00
Ralph Castain
982415749c Update ignores for pmix/ext3x component
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2018-01-30 21:41:55 -08:00
Ralph Castain
d5471d7898 Silence warnings in optimized build
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-20 12:00:28 -08:00
Ralph Castain
4316213805 Fix add-host support by including the location for procs of prior jobs when spawning new daemons.
Thanks to CalugaruVaxile for the report

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-12-07 14:48:58 -08:00
Ralph Castain
b5bf0a7f1d Add a new posix_spawn component to the ODLS framework.
Only selectable when specifically requested via "-mca odls pspawn"

Note that there are several concerns:
  * we aren't getting SIGCHLD calls when the procs terminate
  * we aren't seeing the IO pipes close on termination, though
    we are getting output forwarded to mpirun
  * I haven't found a way to bind the child process prior to exec.
    If we want to use this method, we probably need someone to
    implement a cgroup component for the orte/rtc framework

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-11-30 18:01:31 -08:00
Ralph Castain
d4b83cc951 Sync with PMIx master
Implement direct modex protection to turn off PMIx dstore when direct modex scenario is detected

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-11-07 18:10:56 -08:00
Ralph Castain
6be74bfa7e Add another test program for cross-lib coordination, this one based on native PMIx commands
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-10-29 11:33:25 -07:00
Ralph Castain
f8ce31f13c Fix event registration so OpenMP/MPI coordination sides can both get notification of model declarations
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-10-19 18:06:38 -07:00
Ralph Castain
c696e04c5e Since PMIx is moving to release v3.0, embed the new release candidate in opal/pmix framework. Move the pmix2x code over to the ext2x component. Create a new ext3x component
Remove some build product. Tell PMIx that we don't need a new nspace generated when OMPI calls connect
Add missing Makefile

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-10-09 13:51:08 -07:00
Ralph Castain
fcb7a2f29b Minor cleanups for when using external pmix
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-09-24 09:53:04 -07:00
Gabe Saba
c6235a9a0f reachable: add tests
Add test suite for netlink and weighted reachable components.  We
don't have a great way of running components through unit tests
today, so make them stand-alone tests that are run with mpirun
and such.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2017-09-19 19:42:54 -07:00
Brian Barrett
bffcc3bca0 util: move graph solver from usnic to util
Cisco wrote a bipartite graph solver to properly solve
interface pair selection for usNIC.  Using the reachable
framework, the TCP BTL (and possibly the runtime network
code) can use the graph solver to make more optimal pair
selection.  Jeff was happy to have the code more broadly
used, but didn't have time to do the move, hence this
commit.

There are a couple of minor changes to the code compared
to the usNIC version.  Obviously, the functions have
been renamed to match naming convention for their new
home.  Since it's easier to write unit tests for
util/ code, the unit tests have been made first class
tests run at "make check" time.  This last bit required
moving some of the definitions into a new header,
bipartite_graph_internal.h, so that they could be
included in both the library code and the test code.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2017-09-15 15:08:47 -07:00
Ralph Castain
bbd83fd4c0 Add a new launcher "prun" for starting applications against the ORTE DVM.
Unlike "orterun", "prun" is a PMIx-only program that discovers the DVM connection instead of requiring that we explicitly provide it. Only build "prun" if PMIx v2.x is available.

This gets the DVM working again, but still is showing problems for multiple executions. I'll detail those in a separate issue. Thus, the DVM should still be considered "broken".

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-09-12 21:40:41 -07:00
Brian Barrett
29a53b0269 git: Ignore OSHMEM C++ wrapper artifacts
Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2017-09-08 08:54:08 -07:00
Ralph Castain
d515f48885 The local PMIx server is notifying its clients of all events, but for some reason I don't recall, the broadcast notification was marked for delivery only to non-default event handlers. This creates a discrepancy between the two behaviors, so don't restrict the broadcast notifications.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-08-18 17:26:11 -07:00
Ralph Castain
f39ce67982 Merge pull request #3951 from rhc54/topic/hwloc2
Update to hwloc 2.0.0a
2017-08-01 15:18:31 -06:00
Brian Barrett
fe8e4a0402 dist: Autogenerate AUTHORS file
Per discussion at the Summer 2017 developers meeting, generate
the AUTHORS list at make dist time, rather than trying to
keep it up to date and merge on the branches by hand.  While
most of the data is generated from git, the organization list
was maintained by hand.  The general feeling at the meeting was
that the organization list was not adding value and there were
concrete cases where it involved much chasing by the RMs, so
it has been removed.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2017-07-27 13:04:17 -07:00
Ralph Castain
7a83fdb9bb Update to hwloc 2.0.0a with shmem support.
Update to support passing of HWLOC shmem topology to client procs
Update use of distance API per @bgoglin
Have the openib component lookup its object in the distance matrix
Bring usnic up-to-date
Restore binding for hwloc2

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-25 20:26:22 -07:00
Ralph Castain
7d8d877837 Remove build product and update .gitignore to avoid picking it up again
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-07-20 11:49:48 -07:00
Ralph Castain
0b9d8f8a41 Update ignores
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-27 09:07:19 -07:00
Ralph Castain
93cf3c7203 Update OPAL and ORTE for thread safety
(I swear, if I look this over one more time, I'll puke)

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-06-06 12:30:57 -07:00
KAWASHIMA Takahiro
76b1f80664 java: Use correct date/version in mpijava man page
`mpijavac.1` should be generated at `make`-time...

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2017-05-31 17:24:49 +09:00
Ralph Castain
e8759ca66b Add minor test to ORTE test suite
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-29 15:43:52 -07:00
Ralph Castain
657e701c65 Add debug verbosity to the orte data server and pmix pub/lookup functions
Start updating the various mappers to the new procedure. Remove the stale lama component as it is now very out-of-date. Bring round_robin and PPR online, and modify the mindist component (but cannot test/debug it).

Remove unneeded test

Fix memory corruption by re-initializing variable to NULL in loop

Resolve the race condition identified by @ggouaillardet by resetting the
mapped flag within the same event where it was set. There is no need to
retain the flag beyond that point as it isn't used again.

Add a new job attribute ORTE_JOB_FULLY_DESCRIBED to indicate that all the job information (including locations and binding) is included in the launch message. Thus, the backend daemons do not need to do any map computation for the job. Use this for the seq, rankfile, and mindist mappers until someone decides to update them.

Note that this will maintain functionality, but means that users of those three mappers will see large launch messages and less performant scaling than those using the other mappers.

Have the mindist module add procs to the job's proc array as it is a fully described module

Protect the hnp-not-in-allocation case

Per path suggested by Gilles - protect the HNP node when it gets added in the absence of any other allocation or hostfile

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-25 18:41:27 -07:00
Ralph Castain
ef0e0171c9 Implement the changes required to support cross-library coordination. Update PMIx to support intra-process notifications and ensure that we always notify ourselves for events. Add a new ompi/interlib directory where cross-lib coordination code can go, and put the code to declare ourselves there (called from ompi_mpi_init.c).
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-05-08 10:04:50 -07:00
Ralph Castain
95ae0d1df3 Cleanup timing macros for portability across compilers. Rename the --enable-timing configure option to be --enable-pmix-timing so it doesn't pickup external timing requests. Remove a stale function reference in PMIx so it can compile with timing enabled.
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-04-10 12:56:38 +06:00
Ralph Castain
9eab9a1ed3 Remove stale global variables
Revamp the event notification integration to rely on the PMIx event chaining and remove the duplicate chaining in OPAL. This ensures we get system-level events that target non-default handlers.

Restore the hostname entries for MPI-level error messages, but provide an MCA param (orte_hostname_cutoff) to remove them for large clusters where the memory footprint is problematic. Set the default at 1000 nodes in the job (not the allocation).

Begin first cut at memory profiler

Some minor cleanups of memprobe

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2017-01-02 14:04:24 -08:00
Ralph Castain
1a0bccb536 Now that PMIx has settled on its release strategy and numbering, update the OPAL pmix framework to track
Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-12-02 15:44:43 -08:00
Ralph Castain
d5fd635efe Bring forward the debugger-related changes
Refs https://github.com/open-mpi/ompi/pull/2425

Signed-off-by: Ralph Castain <rhc@open-mpi.org>
2016-11-29 13:15:20 -08:00
Gilles Gouaillardet
52a1f96726 fortran/use-mpi-tkr: update .gitignore
ignore automatically generated mpi-tkr-sizeof.*

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2016-10-28 10:41:59 +09:00