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Автор SHA1 Сообщение Дата
Ralph Castain
81d0b06842 Strip the domain info from the hostname if that option is specified, protecting IP address-based names 
This commit was SVN r27586.
 2012-11-10 14:05:27 +00:00
Ralph Castain
615cc66b44 Protect the HNP cleanup in cases where no session dirs are created 
This commit was SVN r27585.
 2012-11-10 14:03:07 +00:00
Ralph Castain
fd632147df Per patch from Nathan, with a few fixes, cleanup the orte-info tool 
This commit was SVN r27581.
 2012-11-10 04:11:40 +00:00
Nathan Hjelm
e0f5137e46 add prototypes for lex destroy functions 
This commit was SVN r27580.
 2012-11-09 22:00:27 +00:00
Nathan Hjelm
a754674fd7 Per the specification for putenv (http://pubs.opengroup.org/onlinepubs/009604599/functions/putenv.html) the string given to putenv becomes part of the environment. The string must not be changed or freed. 
cmr:v1.7

This commit was SVN r27578.
 2012-11-09 16:33:14 +00:00
Nathan Hjelm
8658bbc902 instead of relying on yyterminate to clean up the lex context call the destroy functions directly (after closing the file) 
This commit was SVN r27577.
 2012-11-09 16:10:55 +00:00
Nathan Hjelm
842caae4c7 Fix a small leak in orte/util/name_fns.c 
cmr:v1.7

This commit was SVN r27576.
 2012-11-07 23:59:49 +00:00
Ralph Castain
9b729794f2 A prior commit apparently broke the trunk when something was inadvertently left behind - so remove a reference to a no-longer-existing function 
This commit was SVN r27574.
 2012-11-07 11:11:05 +00:00
Nathan Hjelm
7fb5caea92 Remove the finish_parsing function from various .l files. The function is incomplete (doesn't clean up the lex state) and should be replaced by *_yylex_destroy which correctly cleans up the state. 
Checked with the flex 2.5.35. Verified with valgrind that this fixes several "still reachable" leaks.

cmr:v1.7

This commit was SVN r27571.
 2012-11-06 19:26:14 +00:00
Nathan Hjelm
bdedd8b0d3 Per RFC modify the behavior of mca_base_components_close to NOT close the output. Modify frameworks to always close their output and set to -1. 
Reasoning: The old behavior was a little confusing. mca_base_components_open does not open an output stream so it is a little unexpected that mca_base_components_close does. To add to this several frameworks (that don't use mca_base_components_close) failed to close their output in the framework close function and others closed their output a second time. This change is an improvement to the symantics of mca_base_components_open/close as they are now symetric in their functionality.

This commit was SVN r27570.
 2012-11-06 19:09:26 +00:00
Ralph Castain
27b41a7db4 If the nodename is an IP address, we need to retain the full name (even if keep_fqdn is false) so that the ssh tree spawn can proceed. 
cmr:v1.7

This commit was SVN r27561.
 2012-11-05 16:59:53 +00:00
Ralph Castain
3812979315 Remove stale file - we removed the size functions awhile back 
This commit was SVN r27551.
 2012-11-01 03:36:51 +00:00
Brian Barrett
e61c00212d Add files found in svn but not tarball 
This commit was SVN r27549.
 2012-11-01 02:27:03 +00:00
Brian Barrett
dd907e8d4c Remove unused macro 
This commit was SVN r27547.
 2012-11-01 02:04:57 +00:00
Nathan Hjelm
2acd0f83de Revert "Revert r27451 and r27456 - the cmd line parser is incorrectly marking the application as an MCA parameter". 
It appears the problem was not with the command line parser but the rsh plm. I don't know why this problem was not occuring before the command line parser changes but it appears to be resolved now.

This commit was SVN r27527.

The following SVN revision numbers were found above:
  r27451 --> open-mpi/ompi@d59034e6ef
  r27456 --> open-mpi/ompi@ecdbf34937
 2012-10-30 19:45:18 +00:00
Nathan Hjelm
df9bd0ed59 fix bug in plm/rsh that could add extraneous mca options to the orted argv 
cmr:v1.7

This commit was SVN r27526.
 2012-10-30 19:40:04 +00:00
Ralph Castain
7c3a2c3c92 Allow PMI support to find subdirs named lib64 instead of lib - thanks to Guillaume.Papaure of Bull for the patch 
This commit was SVN r27519.
 2012-10-30 17:38:57 +00:00
Ralph Castain
a080de188f Enable orterun to directly support staged execution, treating each app as a separate job. Support transfer of file maps when support exists. 
This commit was SVN r27516.
 2012-10-29 23:11:30 +00:00
Ralph Castain
e5e72c3137 Expand the dfs API to support retrieval, loading and purging of file maps. 
This commit was SVN r27515.
 2012-10-29 23:05:45 +00:00
Ralph Castain
4e52a15e70 Provide for sync on seek and close DFS operations. Eliminate an unnecessary wake-up timer when using ORTE progress thread 
This commit was SVN r27500.
 2012-10-26 15:49:04 +00:00
Ralph Castain
4ef30c016b Remove stale windows references 
This commit was SVN r27491.
 2012-10-26 01:19:14 +00:00
Ralph Castain
35e5e5b512 Set the orte_event_base to the opal_event_base in ompi_info - we aren't doing anything with progress threads anyway 
This commit was SVN r27488.
 2012-10-25 22:36:08 +00:00
Ralph Castain
df642f1508 Add an API to get a remote file's size. Separate dfs cmds from returned data messages so daemons don't get confused. 
This commit was SVN r27487.
 2012-10-25 22:23:08 +00:00
Ralph Castain
79e36413c2 There was some discussion of this at an earlier time, but we never got around to doing it - so make orte behave more like a regular library, counting the number of times init is called, and executing finalize when all those are exhausted. 
This commit was SVN r27484.
 2012-10-25 18:39:37 +00:00
Ralph Castain
094d6f3143 Add a new "distributed file system" capability to support file access operations across nodes that do not have a network file system attached to them. 
Add a set of URI create/parse utilities

This commit was SVN r27483.
 2012-10-25 17:15:17 +00:00
Ralph Castain
32c185f730 Set a priority for output of forwarded IO so it can effectively compete against inbound messages 
This commit was SVN r27480.
 2012-10-24 23:34:50 +00:00
Ralph Castain
e06c330635 Add the ability to set a backlog limit on forwarded output waiting at mpirun - helps to avoid crashing systems during debug. Note that we default to "unlimited" to maintain current behavior. 
This commit was SVN r27479.
 2012-10-24 23:21:40 +00:00
Ralph Castain
e6014bf2e1 Revert r27451 and r27456 - the cmd line parser is incorrectly marking the application as an MCA parameter 
This commit was SVN r27477.

The following SVN revision numbers were found above:
  r27451 --> open-mpi/ompi@d59034e6ef
  r27456 --> open-mpi/ompi@ecdbf34937
 2012-10-24 18:38:44 +00:00
Ralph Castain
7574d6673b If someone provides the launch_agent cmd, then don't prefix it 
cmr:v1.7

This commit was SVN r27473.
 2012-10-24 16:14:04 +00:00
Ralph Castain
5c0534a7ad Ensure that comm_spawn launches procs on the nodes specified by add-host and add-hostfile 
This commit was SVN r27452.
 2012-10-18 00:40:44 +00:00
Nathan Hjelm
d59034e6ef MCA: remove deprecated mca_base_param functions (mca_base_param_register_int, mca_base_param_register_string, mca_base_param_environ_variable). Remove all uses of deprecated functions. 
cmr:v1.7

This commit was SVN r27451.
 2012-10-17 20:17:37 +00:00
Ralph Castain
4028ce7a5d Silence warnings by making types match 
This commit was SVN r27446.
 2012-10-14 03:45:28 +00:00
Ralph Castain
285a3b168d Add an ability to specify the max number of simultaneous procs/node for an application when operating in staged mode. Change some debug statements from OPAL_OUTPUT_VERBOSE to opal_output_verbose so they are available in optimized builds. 
This commit was SVN r27445.
 2012-10-14 03:31:32 +00:00
Ralph Castain
04304c186f Remove the setup_hadoop configure script as it is no longer required - the hadoop support components can build without accessing hadoop itself. 
This commit was SVN r27385.
 2012-09-29 18:30:35 +00:00
Ralph Castain
9daaa001d9 Remove tools that are no longer required 
This commit was SVN r27383.
 2012-09-29 17:33:16 +00:00
Ralph Castain
54db4c35eb Get the trunk to build again when --without-hwloc is specified. Move a couple of key type definitions and utilities out from under the HAVE_HWLOC test so they are always available as they don't really depend on hwloc's presence. Tell two compnents not to build if hwloc is disabled: 
ompi/mca/sbgp/basesmsocket
orte/mca/rmaps/lama

Remove stale configure.params files from the sbgp framework as the OMPI build system no longer looks at those files.

This commit was SVN r27377.
 2012-09-26 23:24:27 +00:00
Samuel Gutierrez
42280e2af5 Temporarily make routed binomial the default. We are experiencing issues with 
debruijn when launching fewer processes than are actually available within an
allocation. When this is fixed, please revert this change.

This commit was SVN r27376.
 2012-09-26 16:08:12 +00:00
Jeff Squyres
cb65a44c6c Fix the component priority assignment. Thanks to Alex Margolin for 
the patch.

This commit was SVN r27363.
 2012-09-25 07:13:23 +00:00
George Bosilca
6ec41400b3 Fix the error message in case a daemon does not succeed at killing the 
local offspring.

This commit was SVN r27362.
 2012-09-24 15:25:21 +00:00
Ralph Castain
d5279b0dc8 Make an attempt to protect hwloc cset2str from segfaulting in weird scenario 
This commit was SVN r27361.
 2012-09-23 16:51:51 +00:00
Ralph Castain
1ddb334a52 Put the specified JDK path first so we find that one 
This commit was SVN r27360.
 2012-09-22 19:08:52 +00:00
Ralph Castain
d95025f53a Ensure we clear the usage numbers when binding on multiple nodes so we don't "carry over" info from one node to the next. Use the same tracking mechanism for binding upwards and in-place to avoid doing a bunch of mallocs. 
Refs trac:3322

This commit was SVN r27356.

The following Trac tickets were found above:
  Ticket 3322 --> https://svn.open-mpi.org/trac/ompi/ticket/3322
 2012-09-20 15:16:06 +00:00
Ralph Castain
90d7b5fdca Update test 
This commit was SVN r27354.
 2012-09-20 02:51:27 +00:00
Ralph Castain
445161cd2e Correctly count the total number of allocated slots 
This commit was SVN r27353.
 2012-09-20 02:50:14 +00:00
Ralph Castain
f592967685 Add missing retain to maintain correct accounting on nodes 
This commit was SVN r27352.
 2012-09-20 02:30:53 +00:00
Ralph Castain
e309db0be9 Ensure file descriptors are closed upon completion of transfer 
This commit was SVN r27349.
 2012-09-18 18:39:29 +00:00
Ralph Castain
11305109e1 Track positioned files so we avoid re-positioning them across jobs 
This commit was SVN r27347.
 2012-09-18 15:56:21 +00:00
Ralph Castain
a3060cdd15 Fix the bind_downward code - it was incorrectly looking across the entire node instead of only looking below the locale to which the proc had been assigned. In other words, if the proc was mapped to a core, then the only hwthreads that should be considered for binding are those directly below that core. The binding algo was incorrectly looking at ALL hwthreads in that scenario, causing the proc to be bound to an HT outside of the mapped location. 
This now results in the procs being bound within their assigned location. It also causes us to use only the 0th HT on a core unless --use-hwthread-cpus has been specified (in which case, we use all the HTs in a core). Bind to core binds you to all HTs regardless - the --use-hwthread-cpus only impacts the oversubscribed determination and when binding to HT.

cmr:v1.7

This commit was SVN r27342.
 2012-09-14 22:01:19 +00:00
Ralph Castain
9057e84ec1 Correct test statement 
This commit was SVN r27321.
 2012-09-12 14:30:03 +00:00
Ralph Castain
c4fd3df2df Remove unused variables 
This commit was SVN r27319.
 2012-09-12 12:03:24 +00:00