ports/openmpi
ports/openmpi
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306 Коммитов

Автор SHA1 Сообщение Дата
Edgar Gabriel
824d488709 - make the split collective shared file pointer operations work 
- minor code restructering in io/ompio required for that.
 2015-07-28 09:05:05 -05:00
Edgar Gabriel
e380f8c235 - fix the delete priority of the ompio component 
- some application use MPI_File_delete as a collective function (e.g. IOR), which I think is not really covered by the standard. Right now, one process succeeds and theother ones return an error code. Fix that by not returning no error if the file that we try to delete does not exist anymore, to make these applications work.
 2015-07-27 15:53:40 -05:00
Edgar Gabriel
3fb0614566 mark the request as ACTIVE 2015-07-27 12:43:45 -05:00
Edgar Gabriel
b484784dca make ompio return gracefully in case something goes wrong early in file_open. 2015-07-20 10:03:16 -05:00
Edgar Gabriel
86c3000e18 fix the delete selection logic in io/base. With the previous version, there was a mismatch 
in the version number and no component was selected for file_delete.
 2015-07-20 10:01:30 -05:00
Edgar Gabriel
f2af8e94ff - first cut on the io interface changes 
- add the C interfaces for the new non-blocking collective I/O functions of MPI 3.1
 2015-07-09 10:58:13 -05:00
Gilles Gouaillardet
9e89985f3d restore whitespaces into the pdf files 2015-07-07 09:17:00 +09:00
Nathan Hjelm
4d92c9989e more c99 updates 
This commit does two things. It removes checks for C99 required
headers (stdlib.h, string.h, signal.h, etc). Additionally it removes
definitions for required C99 types (intptr_t, int64_t, int32_t, etc).

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
 2015-06-25 10:14:13 -06:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Edgar Gabriel
dedeee9771 finishing the changes for the non-blocking and split cpllective I/O operations. Everything except for the 
interface changes to the io framework is done.
 2015-06-18 06:22:41 -05:00
Edgar Gabriel
3b11a8b61c making the current work compile. 2015-06-18 05:56:51 -05:00
Edgar Gabriel
cc219281ba checkpoint of the current work, since I need to resync wioth master to fix the compilation problems 2015-06-18 05:20:07 -05:00
Edgar Gabriel
100515e321 remove split collective interfaces from fcoll and their fake implemenations. Not required anymore 2015-06-18 05:20:07 -05:00
Gilles Gouaillardet
0f08070a1c ompio: fix misc memory leaks 
as identified by Coverity with CIDs 72147-72149, 731275 and 1269872
 2015-06-17 11:17:54 +09:00
Edgar Gabriel
aa72e5b2ca fix the selection logic to not overwrite on the new aggregator side the list of 
aggregators determined by the algorithm.
 2015-05-27 22:35:45 -05:00
Gilles Gouaillardet
b6c67e051d io/ompio: fix misc memory leaks 
as reported by Coverity with CIDs 72147-72149,72187,72188,731274,731275,741356,
1269889,1269893,1271535 and 1269872
 2015-05-20 17:19:39 +09:00
Gilles Gouaillardet
650289bc33 romio314: update one more romio->romio314 name 
Also missed this in open-mpi/ompi@db257cdbc0.
 2015-05-08 18:26:33 +09:00
Gilles Gouaillardet
9d56b85b55 initialize common symbols from ompi 2015-05-08 10:11:58 +09:00
Gilles Gouaillardet
ab148e4e0c romio314: update one more romio->romio314 name 
Also missed this in open-mpi/ompi@db257cdbc0.
 2015-05-08 09:12:22 +09:00
Jeff Squyres
b3d89cf7b0 romio314: update one more romio->romio314 name 
Missed this in db257cdbc007b0c805dffe3157809f803c9342d3.
 2015-05-07 09:40:45 -07:00
Jeff Squyres
691b4ec1e5 romio314: whitespace cleanup 
No code changes
 2015-05-05 06:23:59 -07:00
Jeff Squyres
db257cdbc0 romio314: adhere to the prefix rule 
Rename all files and symbols from "io_romio" to "io_romio314".  This
fixes --disable-dlopen builds (because they were missing
the mca_io_romio314_component symbol).
 2015-05-05 06:23:59 -07:00
Jeff Squyres
8127c24f30 romio314/Makefile.am: whitespace cleanup 
No code changes.
 2015-05-04 07:20:11 -07:00
Jeff Squyres
332bca7183 romio314/Makefile.am: name the component library properly 2015-05-04 07:20:11 -07:00
Gilles Gouaillardet
6b3126e69e ROMIO 3.1.4 refresh: add refresh notes 2015-04-30 19:02:20 +09:00
Gilles Gouaillardet
e1b6ab4f1d ROMIO 3.1.4 refresh: remove old romio 2015-04-30 19:01:23 +09:00
Gilles Gouaillardet
85e77079b4 ROMIO 3.1.4 refresh: use romio from mpich 3.1.4 2015-04-30 19:00:50 +09:00
Gilles Gouaillardet
92f6c7c1e2 ROMIO 3.1.4 refresh: apply post romio-3.1.4 patches 2015-04-30 18:56:53 +09:00
Gilles Gouaillardet
6400bc75ab ROMIO 3.1.4 refresh: patch romio for Open MPI 2015-04-30 18:53:55 +09:00
Gilles Gouaillardet
eacd434a02 ROMIO 3.1.4 refresh: import romio from mpich 3.1.4 tarball 2015-04-30 18:53:03 +09:00
Gilles Gouaillardet
e2e91142d5 ROMIO 3.1.4 refresh: prepare new romio directory 2015-04-30 18:52:22 +09:00
Gilles Gouaillardet
1ee58af8f5 update ROMIO .gitignore 2015-04-30 18:49:53 +09:00
Gilles Gouaillardet
18b75bd40d io/base: check the MCA version matches 2015-04-28 17:48:23 +09:00
Nathan Hjelm
df75d0382f ompi: use C99 subobject naming for component initialization 
This commit helps future-proof ompi components by initializing each
component member by name.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
 2015-04-18 10:29:58 -06:00
Mangala Jyothi Bhaskar
c4de46e284 Fix number of aggregators used in two phase fcoll 2015-04-16 10:39:10 -05:00
Nathan Hjelm
b68d66bb9b MCA: Add the project/project version to the MCA base component 
This commit adds support for project_framework_component_* parameter
matching. This is the first step in allowing the same framework name
in multiple projects. This change also bumps the MCA component version
to 2.1.0.

All master frameworks have been updated to use the new component
versioning macro. An mca.h has been added to each project to add a
project specific versioning macro of the form
PROJECT_MCA_VERSION_2_1_0.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
 2015-03-27 10:59:04 -06:00
Gilles Gouaillardet
f03d7dce17 ompio: fix deallocation sequence 
as reported by Coverity with CID 1287034
 2015-03-06 14:59:59 +09:00
Gilles Gouaillardet
5b2122381b ompio: fix misc memory leaks 
as reported by Coverity with CIDs 72127, 72145, 72146, 72177, 72179,
72186, 731276, 731278, 1269888, 1269890
 2015-03-05 16:22:19 +09:00
Howard Pritchard
53fd425a6a romio: patches from Rob Latham for issue #255 
Patches supplied by Rob Latham which fix issue #255.

See
http://git.mpich.org/mpich.git/commit/4e80e1d2b9
http://git.mpich.org/mpich.git/commit/5a10283bf7fd

Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
 2015-03-02 15:33:49 -08:00
Howard Pritchard
2b5c52fb05 romio: add comment per Rob Latham's request 2015-02-28 11:05:03 -07:00
Gilles Gouaillardet
74a46863ca romio: always set err_ status in MPIO_DATATYPE_ISCOMMITTED 
from the ROMIO sources :
/* Any MPI implementation that wishes to follow the thread-safety and
   error reporting features provided by MPICH must implement these
   four functions.  Defining these as empty should not change the behavior
   of correct programs */
the MPIO_DATATYPE_ISCOMMITTED macro now always set err_=0
this is an optimistic approach for Open MPI, but it is likely other upper
layers already checked the datatype was committed.
not setting err_ is incorrect since it can lead to some use of uninitialized
variable.

Fixes open-mpi/ompi#404
 2015-02-26 13:39:05 +09:00
Rob Latham
24a6f14257 fix build error if greq extensions not available 
Fall back to immediately completing the non-blocking request if we are
unable to use the extended generalized request routines.
 2015-02-25 10:52:22 -06:00
Jeff Squyres
657d2cf77b io_ompi: check the correct returned value 
This was CID 731273
 2015-02-24 15:24:11 -05:00
Howard Pritchard
bf89131f9e add owner files to opa/ompi/orte mca directories 
This commit adds an owner file in each of the component directories
for each framework.  This allows for a simple script to parse
the contents of the files and generate, among other things, tables
to be used on the project's wiki page.  Currently there are two
"fields" in the file, an owner and a status.  A tool to parse
the files and generate tables for the wiki page will be added
in a subsequent commit.
 2015-02-22 15:10:23 -07:00
Gilles Gouaillardet
b68e1cd579 ompio: fix memory leaks reported by Coverity scan 
and silence CID 72195
 2015-02-13 13:18:44 +09:00
Jeff Squyres
c368699bde configury: whitespace cleanup 
No code changes.
 2015-02-09 20:49:04 -08:00
Jeff Squyres
0acdf34044 configury: --enable-dist ceased being useful long ago 
The --enable-dist flag is a relic from a prior iteration of the build
system.  It isn't necessary any more.
 2015-02-09 20:49:04 -08:00
Edgar Gabriel
62282a0f06 part 1 of cleaning up the info handling in the ompio component. 2015-01-30 16:13:15 -06:00
Edgar Gabriel
2d79963cb3 mark the request as an IO request 2015-01-29 08:41:24 -06:00
Edgar Gabriel
4a5d3e705b remove an unecessary comm_dup in case the internal file_open function is called from a sharedfp component. 2015-01-28 16:13:50 -06:00