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Brian Barrett
65fedbe3be * followup to r10972... Even if MPI_PROC_NULL is given, we should do the
full argument checking (allowing that MPI_PROC_NULL is legal, of course).
  Only after the argument checking do we shortcut.  Fixes trac:237, which
  was caused by moving the MPI_PROC_NULL test in MPI_Bsend_init, 
  but not allowing for MPI_PROC_NULL when checking rank.

This commit was SVN r11108.

The following SVN revision numbers were found above:
  r10972 --> open-mpi/ompi@31c66d92aa

The following Trac tickets were found above:
  Ticket 237 --> https://svn.open-mpi.org/trac/ompi/ticket/237
2006-08-03 04:44:03 +00:00
Brian Barrett
4176e61049 * Add support for building the F90 bindings library as a shared library
on almost all platforms (except OS X... sigh...).  This is the merge 
  of r10846 - 10894 from the tmp/f90-shared branch to the trunk.

This commit was SVN r11103.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r10846
2006-08-03 00:17:31 +00:00
Jeff Squyres
7784f1a818 Fix a problem noted by Chris Hennes that MPI_INFO_SET would mistakenly
disallow setting long info values.

This commit was SVN r11074.
2006-08-01 16:07:56 +00:00
Jeff Squyres
520147f209 Clean up the Fortran MPI sentinel values per problem reported on the
users mailing list:

  http://www.open-mpi.org/community/lists/users/2006/07/1680.php

Warning: this log message is not for the weak.  Read at your own
risk.

The problem was that we had several variables in Fortran common blocks
of various types, but their C counterparts were all of a type
equivalent to a fortran double complex.  This didn't seem to matter
for the compilers that we tested, but we never tested static builds
(which is where this problem seems to occur, at least with the Intel
compiler: the linker compilains that the variable in the common block
in the user's .o file was of one size/alignment but the one in the C
library was a different size/alignment).

So this patch fixes the sizes/types of the Fortran common block
variables and their corresponding C instantiations to be of the same
sizes/types. 

But wait, there's more.

We recently introduced a fix for the OSX linker where some C versions
of the fortran common block variables (e.g.,
_ompi_fortran_status_ignore) were not being found when linking
ompi_info (!).  Further research shows that the code path for
ompi_info to require ompi_fortran_status_ignore is, unfortunately,
necessary (a quirk of how various components pull in different
portions of the code base -- nothing in ompi_info itself requires
fortran or MPI knowledge, of course).

Hence, the real problem was that there was no code path from ompi_info
to the portion of the code base where the C globals corresponding to
the Fortran common block variables were instantiated.  This is because
the OSX linker does not automatically pull in .o files that only
contain unintialized global variables; the OSX linker typically only
pulls in a .o file from a library if it either has a function that is
used or have a global variable that is initialized (that's the short
version; lots of details and corner cases omitted).  Hence, we changed
the global C variables corresponding to the fortran common blocks to
be initialized, thereby causing the OSX linker to pull them in
automatically -- problem solved.  At the same time, we moved the
constants to another .c file with a function, just for good measure.

However, this didn't really solve the problem:

1. The function in the file with the C versions of the fortran common
   block variables (ompi/mpi/f77/test_constants_f.c) did not have a
   code path that was reachable from ompi_info, so the only reason
   that the constants were found (on OSX) was because they were
   initialized in the global scope (i.e., causing the OSX compiler to
   pull in that .o file).

2. Initializing these variable in the global scope causes problems for
   some linkers where -- once all the size/type problems mentioned
   above were fixed -- the alignments of fortran common blocks and C
   global variables do not match (even though the types of the Fortran
   and C variables match -- wow!).  Hence, initializing the C
   variables would not necessarily match the alignment of what Fortran
   expected, and the linker would issue a warning (i.e., the alignment
   warnings referenced in the original post).

The solution is two-fold:

1. Move the Fortran variables from test_constants_f.c to
   ompi/mpi/runtime/ompi_mpi_init.c where there are other global
   constants that *are* initialized (that had nothing to do with
   fortran, so the alignment issues described above are not a factor),
   and therefore all linkers (including the OSX linker) will pull in
   this .o file and find all the symbols that it needs.

2. Do not initialize the C variables corresponding to the Fortran
   common blocks in the global scope.  Indeed, never initialize them
   at all (because we never need their *values* - we only check for
   their *locations*).  Since nothing is ever written to these
   variables (particularly in the global scope), the linker does not
   see any alignment differences during initialization, but does make
   both the C and Fortran variables have the same addresses (this
   method has been working in LAM/MPI for over a decade).

There were some comments here in the OMPI code base and in the LAM
code base that stated/implied that C variables corresponding to
Fortran common blocks had to have the same alignment as the Fortran
common blocks (i.e., 16).  There were attempts in both code bases to
ensure that this was true.  However, the attempts were wrong (in both
code bases), and I have now read enough Fortran compiler documentation
to convince myself that matching alignments is not required (indeed,
it's beyond our control).  As long as C variables corresponding to
Fortran common blocks are not initialized in the global scope, the
linker will "figure it out" and adjust the alignment to whatever is
required (i.e., the greater of the alignments).  Specifically (to
counter comments that no longer exist in the OMPI code base but still
exist in the LAM code base):

- there is no need to make attempts to specially align C variables
  corresponding to Fortran common blocks
- the types and sizes of C variables corresponding to Fortran common
  blocks should match, but do not need to be on any particular
  alignment 

Finally, as a side effect of this effort, I found a bunch of
inconsistencies with the intent of status/array_of_statuses
parameters.  For all the functions that I modified they should be
"out" (not inout).

This commit was SVN r11057.
2006-07-31 15:07:09 +00:00
Rolf vandeVaart
45719b7de9 Submitted by: Rolf vandeVaart
Reviewed by: Jeff Squyres

Fix for ticket #220.  Missing a few C++ methods.
 MPI::Datatype::Create_indexed_block
 MPI::Datatype::Create_resize
 MPI::Datatype::Get_true_extent

This commit was SVN r11010.
2006-07-26 20:27:14 +00:00
Rainer Keller
ee27f7e2c7 - As according to MPI-1.2, sec 3.2.5, p22, single request
functions MPI_Test, MPI_Testany, MPI_Wait, MPI_Waitany
   should not reset the status.MPI_ERROR as passed by user.
 - This needed implementing the MPI_Waitsome and MPI_Testsome.

This commit was SVN r10980.
2006-07-25 15:29:37 +00:00
Rainer Keller
31c66d92aa Minor fixes to match standard -- and run strict test of mpi_test_suite:
- bsend_init: use *request after error-checking
 - Always reset the status->cancelled
 - cancel, wait: need to check *request for MPI_REQUEST_NULL, not
   NULL...
   (actually ompi_request_wait handles MPI_PROC_NULL, so no need
   to check&set of status_empty in wait.c)

This commit was SVN r10972.
2006-07-24 16:59:01 +00:00
Jeff Squyres
0c102e6e5b Fix OSX linker problems with the Fortran bindings:
- ensure to initialize the values that we use for fortran constants
  (even tough their *values* don't matter -- only their *addresses* do,
  but initializing them or not has implications for the OSX linker)
- move the fortran constants to a file with functions in it, because
  the OSX linker sometimes does not import global variables from
  object files that do not have functions (I'm not even going to
  pretend to get all the subtle details about the OSX linker right
  here -- it's just "better" to have global variables in object files
  with functions that otherwise get pulled in during linker
  resolution).

This commit was SVN r10908.
2006-07-20 19:48:03 +00:00
Jeff Squyres
7899057d4e Add a check for now that invokes an MPI exception if you try to
SPAWN[_MULTIPLE] from a singleton (and displays a pretty help message
explaining that you need to use mpirun).  This can be removed when
fixes for ORTE come over that allow SPAWN[_MULTIPLE] from singletons. 

This commit was SVN r10898.
2006-07-20 14:27:13 +00:00
Rainer Keller
ac58e85c83 - Add the missing collective (and other) functions to mpi.f03
- Correct intent(out) to inout for various recvbufs to match
   standards possibility for MPI_IN_PLACE.

This commit was SVN r10868.
2006-07-18 18:12:09 +00:00
Brian Barrett
2759212e16 * use LN_S instead of ln -s, in case ln -s doesn't work...
This commit was SVN r10839.
2006-07-15 22:02:19 +00:00
Brian Barrett
7dd1112d07 * implement missing MPI::Is_finalized() function
This commit was SVN r10482.
2006-06-22 19:40:54 +00:00
Jeff Squyres
9a679644c2 Arf. Don't output the body of the WTICK or WTIME functions in the
module header if we're not doing small.

This commit was SVN r10475.
2006-06-22 13:20:01 +00:00
Jeff Squyres
723b6e50a9 George suggested a better way to make WTICK and WTIME -- be consistent
with the other methodology even if there are no choice buffers and no
special constants.  But it keeps the Makefile.am simple and the
methodology consistent.

This commit was SVN r10462.
2006-06-21 19:07:09 +00:00
Jeff Squyres
48e9a72c47 Add the missing files -- they're svn:ignored because of all the
generated files.

This commit was SVN r10451.
2006-06-21 14:11:12 +00:00
Jeff Squyres
720f38efc5 Fix for MPI_WTICK / MPI_WTIME F90 bindings issue. The previous hope
was that declaring the type of MPI_WTICK and MPI_TIME in mpif-common.h
would allow the F90 bindings to call through to the back end f77
function and have the right return type.  But upon reflection, that's
silly -- we were just declaring the variables MPI_WTICK and MPI_WTIME
that were of type double precision.  Duh.

So add some fixed (non-generated) wrapper F90 functions to call the
back-end *C* MPI_WTICK and MPI_TIME functions (vs. the back end *F77*
functions).  We have to call the back-end C functions because there's
a name conflict if we try to call the back-end F77 functions -- for
the same reasons that we can't "implicitly" define MPI_WTIME and
MPI_WTICK in the f90 module, we can't call such an implicitly-defined
function.  So we had to add new back-end C functions that are directly
callable from Fortran, the easiest implementation of which was to
provide 4 one-line functions for each (rather than muck around with
weak symbols).

This commit was SVN r10448.
2006-06-21 13:44:20 +00:00
George Bosilca
5cfa775ef9 Pedantic ...
This commit was SVN r10365.
2006-06-15 03:22:28 +00:00
George Bosilca
7d2ce68c2a Correctly compute the boundaries for the Fortran matrix style.
This commit was SVN r10364.
2006-06-15 03:21:54 +00:00
Jeff Squyres
4d337baccf Fix for ticket ticket #119. Do not check the type of the errhandler
-- always return a value c2f translation if it's a valid errhandler.

This commit was SVN r10357.
2006-06-14 19:42:39 +00:00
George Bosilca
e8e30dcc8c And now the final correct version of the subarray function. The problem
with the last one was that the resized function only set the soft lb and ub
markers without actually moving the usefull data up to the correct
displacement. Using a struct instead solve the problem. Anyway, as defined
in the MPI standard we have to set the lower bound and the upper bound
of the new type to the correct values too.

This commit was SVN r10328.
2006-06-13 07:42:23 +00:00
George Bosilca
a3c93df20c As I'm unable to correctly compute the size in multiple of the datatype, let me do
it in the simplest way: multiple of the original datatype + the h version of the
vector function.

This commit was SVN r10313.
2006-06-12 22:08:33 +00:00
Brian Barrett
480ffd3045 Fix issue that came up with testing some LANL romio applications.
MPI_FILE_GET_INFO should return the info currently in use, not the one
used to create the file handle.  ROMIO adds a bunch of keys, so you can
create a file handle with MPI_INFO_NULL and have MPI_FILE_GET_INFO return
something totatlly different.

This commit was SVN r10312.
2006-06-12 21:45:48 +00:00
George Bosilca
57bdb323b0 Initialize the extent before using it.
This commit was SVN r10309.
2006-06-12 19:38:52 +00:00
George Bosilca
20c34a53f7 Set the lb and extent for the case when the dimension is 1 and make
sure the last_type is defined when we go outside the loop.

This commit was SVN r10297.
2006-06-11 21:27:28 +00:00
George Bosilca
386a02d2ae Rewrite the subarray strictly following the MPI standard. Set the lb and ub
as it should be. I hope I get it right this time ...

This commit was SVN r10293.
2006-06-11 19:57:49 +00:00
Jeff Squyres
8b8bf363c4 Add missing svn:executable property
This commit was SVN r10283.
2006-06-10 10:59:01 +00:00
Jeff Squyres
02d8a46d5f Fix for ticket #89.
* Change the type of Fortan's MPI_STATUSES_IGNORE to double complex
so that it will never possibly be mistaken for a real status (i.e.,
integer(MPI_STATUS_SIZE)), particularly in the F90 bindings.  See
comment in mpif-common.h explaining this (analogous argument to
MPI_ARGVS_NULL for MPI_COMM_SPAWN_MULTIPLE).
 * Add second interfaces for the following functions that take a double
complex (i.e., MPI_STATUSES_IGNORE).  This required adding the second
interface in mpi-f90-interfaces.h[.sh] and then generating new wrapper
functions to call the back-end F77 function for each of these four, so
we added 4 new files in ompi/mpi/f90/scripts/ and updated the various
Makefile.am's to match:
   * MPI_TESTALL
   * MPI_TESTSOME
   * MPI_WAITALL
   * MPI_WAITSOME

The XSL is now not in sync with the scripts.  Although I suppose that
that is becoming less and less important (because it does not impact
the end user at all -- to be 100% explicit, no release should ever be
held up because the XSL is out of sync), but it will probably be
important when we go to fix the "large" interface; so it's still worth
fixing... for now...

This commit was SVN r10281.
2006-06-09 23:40:20 +00:00
Sven Stork
0084c9469a use correct free methode for additional allocated memory
This commit was SVN r10241.
2006-06-07 10:24:28 +00:00
George Bosilca
a64a80dff4 If the user type has a size of zero let's return zero. We will have a consistent behavior
with MPICH.

This commit was SVN r10230.
2006-06-06 19:51:42 +00:00
George Bosilca
7d7e801f15 External pack/unpack fixes.
This commit was SVN r10223.
2006-06-06 03:26:32 +00:00
George Bosilca
07fb4b8012 Allow a block indexed type with a count of zero. Be user friendly and set the ub, lb,
true_lb as well as the true_ub to zero in this case.

This commit was SVN r10208.
2006-06-05 21:16:57 +00:00
George Bosilca
5c2d2fc02a Match size is supposed to return Fortran types.
This commit was SVN r10206.
2006-06-05 21:07:48 +00:00
George Bosilca
e50cdeb927 Allow the creation of strcutres with count zero. And try to have a more friendly behavior
(even if I don't agree with it) by setting the lb, ub, true_lb and true_ub to zero.

This commit was SVN r10205.
2006-06-05 21:07:16 +00:00
Craig E Rasmussen
8a22272ffb Changed to use procedure alias (when names too long).
This commit was SVN r10145.
2006-05-31 15:06:44 +00:00
Craig E Rasmussen
4cd13f07c4 Changed to use procedure alias (when names too long).
This commit was SVN r10144.
2006-05-31 15:04:38 +00:00
Jeff Squyres
5f356edb64 Bring over changes from the /tmp/fortran-stuff series:
- Make the F90 bindings compile and link properly with gfortran 4.0,
  4.1, Intel 9.0, PGI 6.1, Sun (don't know version offhand -- the most
  current as of this writing, I think), and NAG 5.2, although some
  have limitations (e.g., NAG can't seem to handle the medium and
  large sizes)
- Building the F90 "small" module size is now the default, even for
  developers
- Split up mpif.h into multiple files because parts of it were toxic
  to the F90 bindings
- Properly specify unsized/unshaped arrays to make the bindings work
  on all known compilers
- Make ompi_info show Fortran 90 bindings size
- XML somewhat lags the generated scripts as of this commit, but
  functionality was my main goal -- the XML can be updated later (if
  at all).

This commit was SVN r10118.
2006-05-30 14:37:41 +00:00
Jeff Squyres
faf63c68f8 Merge over from the /tmp/fortran-stuff branch
- split mpif.h into mpif.h and mpif-common.h[.in]
- mpif-common.h is included by various f90 things and contains output
  from configure
- mpif.h defines some f77-specific stuff and then includes
  mpif-common.h 

This commit was SVN r9997.
2006-05-20 02:15:49 +00:00
Jeff Squyres
299f4fdb2c Oops -- fix the comment. A victim of cut-n-paste.
This commit was SVN r9971.
2006-05-18 18:10:12 +00:00
Jeff Squyres
942f9e8f8d Fixes for ticket:14. Lengthy discussion is on that ticket and in a
comment in ompi_comm_invalid() in
source:/trunk/ompi/communicator/communicator.h.

Short version:
- ompi_comm_invalid() returns TRUE for MPI_COMM_NULL
- therefore MPI_COMM_C2F needs to explicitly check for MPI_COMM_NULL
  (because it uses ompi_comm_invalid())
- make ~20 MPI functions only call ompi_comm_invalid() instead of
  calling ompi_comm_invalid() *and* checking for MPI_COMM_NULL (~40 MPI
  functions already only called ompi_comm_invalid() -- we should be
  consistent)
- similar issue for ompi_win_invalid(), so I added a cross-referencing
  comment in win.h and fixed MPI_WIN_SET_NAME to only call
  ompi_win_invalid() (and not check for MPI_WIN_NULL)

This commit was SVN r9970.
2006-05-18 18:05:46 +00:00
Jeff Squyres
800ba39152 Fixes for:
- make dist
- proper inclusion of files between trivial and small
- vpath

This commit was SVN r9964.
2006-05-18 11:26:52 +00:00
Jeff Squyres
a7c854f878 Add some comments explaining why these functions have an interface but
no definition.

This commit was SVN r9962.
2006-05-17 22:22:29 +00:00
Jeff Squyres
c3aeaed77b SPAWN_MULTIPLE should actually be in the "small" size, not the
"medium" size.

This commit was SVN r9961.
2006-05-17 21:58:48 +00:00
Craig E Rasmussen
94f463c924 Changes to remove attr_fn functions from the mpi namespace/module.
This commit was SVN r9960.
2006-05-17 21:31:04 +00:00
Jeff Squyres
95c1f12b97 Missed this one yesterday
This commit was SVN r9958.
2006-05-17 16:31:25 +00:00
Jeff Squyres
1f8cc1af65 Add an extra -I so that compilers can find mpi-f90-interfaces.h in a
vpath build.

This commit was SVN r9937.
2006-05-16 17:30:42 +00:00
Jeff Squyres
d3ff507bc2 Add explicit path to mpi-f90-interfaces.h.sh. Blast; I could have
sworn that I committed this yesterday.

This commit was SVN r9935.
2006-05-16 15:00:23 +00:00
Jeff Squyres
3e60cd163e Ensure that mpi_sizeof.f90 is added to the build
This commit was SVN r9925.
2006-05-15 19:32:01 +00:00
Jeff Squyres
332954e168 Spell the AC_SUBST'ed names properly
This commit was SVN r9924.
2006-05-15 19:31:38 +00:00
Jeff Squyres
171585ff34 Ensure to put implicit none *before* the header file includes
This commit was SVN r9923.
2006-05-15 19:31:01 +00:00
Craig E Rasmussen
13c113b39c Changed INOUT to IN in MPI_*_SET_ATTR functions.
This commit was SVN r9922.
2006-05-15 17:13:20 +00:00