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Граф коммитов

1074 Коммитов

Автор SHA1 Сообщение Дата
Nathaniel Graham
7f6d141bd6 More one sided java bindings.
Bindings for the MPI_WIN_FLUSH_LOCAL, MPI_WIN_FLUSH_LOCAL_ALL, MPI_WIN_ALLOCATE, MPI_WIN_ALLOCATE_SHARED, and MPI_COMM_SPLIT_TYPE.  Also added several necessary constants.

Signed-off-by: Nathaniel Graham ngraham@lanl.gov
2015-07-10 11:40:18 -06:00
Howard Pritchard
e9d6c7a910 Merge pull request #693 from nrgraham23/additional_java_bindings
Additional java bindings
2015-07-10 11:10:29 -06:00
Jeff Squyres
d5e16839e9 mpi_f08: restore C/Fortran compatibility with F08 BUFFER_DETACH
The C int/Fint interoperability code was erroneously removed when this
function was moved to the use-mpi-f08 directory.
2015-07-08 03:55:50 -07:00
Nathaniel Graham
26c528a627 Copyright additions
Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
2015-07-07 16:14:21 -06:00
Howard Pritchard
68c69d07ff add copyrights to changed java related files
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-07-07 16:10:58 -06:00
Nathaniel Graham
982a232955 Additional Java Bindings
Java bindings for the following functions: MPI_RACCUMULATE, MPI_GET_ACCUMULATE, MPI_RGET_ACCUMULATE, MPI_WIN_LOCK_ALL, MPI_WIN_UNLOCK_ALL, MPI_WIN_SYNC, MPI_WIN_FLUSH, MPI_WIN_FLUSH_ALL, MPI_COMPARE_AND_SWAP, and MPI_FETCH_AND_OP.  Also includes Java bindings for the Operations MPI_REPLACE and MPI_NO_OP.

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
2015-07-07 16:04:17 -06:00
Jeff Squyres
8ff60c47cc mpi_f08: move the f08 version of buffer_detach to use-mpi-f08
@ggouaillardet was right -- we should have put the
ompi_buffer_detach_f08() function in the use-mpi-f08 directory to
begin with.  Putting it in the mpif-h directory made it complicated as
to whether the function would be built or not (e.g., whether weak
symbols were supported or not, whether the profiling layer was
disabled or not, ...etc.).

Just put it in the use-mpi-f08 directory and always build it (when the
mpi_f08 module is built, of course), and keep it simple.
2015-07-07 07:38:09 -07:00
Gilles Gouaillardet
9e89985f3d restore whitespaces into the pdf files 2015-07-07 09:17:00 +09:00
Howard Pritchard
fb9c218e5d Merge pull request #684 from nrgraham23/java_bindings
ompi/java: add MPI_Rget and MPI_Rput java bindings
2015-07-06 15:25:06 -06:00
Jeff Squyres
e28f016793 fortran only compile f08 buffer_detach once
Since there is no profiling version of the f08 buffer_detach function
(or, more specifically, the Fortran compile does the name mangling of
MPI and PMPI to the back-end C function for us), ensure that it is
only compiled once.

Also, per Gilles' observation, the f08-related #pragmas are no longer
relevant.
2015-07-06 09:52:27 -07:00
Jeff Squyres
4694b16256 mpi_f08: further fixes for MPI_BUFFER_DETACH
A few minor fixes in addition to
open-mpi/ompi@bd94da7de4 and
open-mpi/ompi@fc69c0be24.
2015-07-04 05:27:22 -07:00
Jeff Squyres
bd94da7de4 mpi_f08: fix MPI_BUFFER_DETACH interfaces
Add an mpi_f08-specific implementation for MPI_BUFFER_DETACH.

Per MPI-3.1:3.6, p45, the buffer argument is ignored in
MPI_BUFFER_DETACH for mpif.h and the mpi module.  But in the mpi_f08
module, the buffer argument is treated like it is in the C binding.
2015-07-03 08:56:34 -07:00
Gilles Gouaillardet
6356c4b113 mpif: fix typo in interface name
* MPI_Comm_dup_with_info
 * MPI_Comm_split_type
 * PMPI_Comm_split_type
2015-07-02 17:13:07 +09:00
Gilles Gouaillardet
fa50e0d712 mpi_f08: fix typo in binding name
replace MPI_Win_flush_all_local with MPI_Win_flush_local_all
2015-07-02 15:47:38 +09:00
Nathaniel Graham
bb5699e912 ompi/java: add MPI_Rget and MPI_Rput java bindings
Wrote tests for ompi tests, but will commit later.

Signed-off-by: Nathaniel Graham <ngraham@lanl.gov>
2015-06-30 12:05:59 -06:00
Gilles Gouaillardet
c4025f55a4 mpi_f08: add MPI_Type_size_x and misc PMPI_xxx bindings 2015-06-30 16:31:14 +09:00
Gilles Gouaillardet
18fd30a173 mpi_f08: fix MPI_FREE_MEM binding 2015-06-30 14:19:50 +09:00
Gilles Gouaillardet
13950c3ec1 mpi_f08: fix MPI_WIN_{ATTACH,DETACH} bindings
fixes INTENT from open-mpi/ompi@9600e2bc63
2015-06-30 12:28:23 +09:00
Gilles Gouaillardet
86bbdd2ebe mpi_f08: fix MPI_COMM_SPAWN_MULTIPLE binding 2015-06-30 11:47:45 +09:00
Jeff Squyres
fc69c0be24 mpi_f08: fix MPI_BUFFER_DETACH binding 2015-06-29 09:22:30 -07:00
Gilles Gouaillardet
e0dd9bd2e7 Fix java bindings disaster
that commit fixes :
- open-mpi/ompi@224f97b009
- open-mpi/ompi@ade7de549c
- open-mpi/ompi@0836344673
- open-mpi/ompi@7e0581c853
- open-mpi/ompi@d948a43993
2015-06-29 09:51:36 +09:00
Gilles Gouaillardet
d948a43993 java: fix typo in MPI_Win_attach binding 2015-06-28 09:27:19 +09:00
Gilles Gouaillardet
98bf02485d fortran: add Fortran 2008 bindings for attr_fn (MPI_COMM_DUP_FN and friends)
Fixes open-mpi/ompi#460
2015-06-26 15:21:30 +09:00
Gilles Gouaillardet
e701bf35cc MPI_Win_{get,set}_info : add man pages 2015-06-26 15:14:25 +09:00
Gilles Gouaillardet
6e2951e8d7 MPI_Win_{attach,detach} : add man pages 2015-06-26 15:14:25 +09:00
Gilles Gouaillardet
f7bbad96be MPI_Win_create_dynamic : add man page 2015-06-26 15:14:24 +09:00
Gilles Gouaillardet
7e0581c853 MPI_Win_{get,set}_info : add Java bindings 2015-06-26 15:10:15 +09:00
Gilles Gouaillardet
0836344673 MPI_Win_{attach,detach} : add Java bindings 2015-06-26 15:10:14 +09:00
Gilles Gouaillardet
ade7de549c MPI_Win_create_dynamic : add Java bindings 2015-06-26 15:10:14 +09:00
Ralph Castain
265cd14f60 Purge whitespace 2015-06-25 13:27:56 -07:00
Nathan Hjelm
ee36d813dc Merge pull request #657 from hjelmn/c99
more c99 updates
2015-06-25 11:21:09 -06:00
Nathan Hjelm
4d92c9989e more c99 updates
This commit does two things. It removes checks for C99 required
headers (stdlib.h, string.h, signal.h, etc). Additionally it removes
definitions for required C99 types (intptr_t, int64_t, int32_t, etc).

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-25 10:14:13 -06:00
Nathan Hjelm
e561f150d6 Merge pull request #658 from hjelmn/mpit_fixes
Fix definition of MPI_T_pvar_get_index
2015-06-24 16:40:25 -07:00
Nathan Hjelm
4552afff06 Fix definition of MPI_T_pvar_get_index
The definition of MPI_T_pvar_get_index was incorrect. This commit
fixes the definition and adds a missing return code.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-24 17:31:26 -06:00
Nathan Hjelm
458cd9d611 Merge pull request #629 from hjelmn/aint_math
Add support for MPI-3.1 MPI_Aint functions
2015-06-24 10:52:44 -07:00
Nathan Hjelm
6dd9658d73 man: remove F77 notes from MPI_Aint_add/MPI_Aint_diff man pages
Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-24 11:49:48 -06:00
Jeff Squyres
258d1aa160 mpi-f08: corrections to new MPI_Aint_* subroutines
(cherry picked from commit 8f252e65b02bfe20cacee0ece8c835246eea3bd9)
2015-06-24 10:42:01 -07:00
Ralph Castain
869041f770 Purge whitespace from the repo 2015-06-23 20:59:57 -07:00
Nathan Hjelm
c33b786dd9 Merge pull request #620 from hjelmn/ompi_coverity
ompi coverity fixes
2015-06-16 06:10:40 -06:00
Howard Pritchard
224f97b009 mpi/java: suppress common symbols warning
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2015-06-15 17:13:40 -06:00
Nathan Hjelm
090922887b win_get_attr: fix coverity issues
CID 71734 Self assignment (NO_EFFECT)

This code has no effect. The original author of the offending code
does not remember why the self-assignment is there. Fortran
MPI_Win_get_attr tests are working with or without it so remove the
code.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-06-09 09:34:26 -06:00
Nathan Hjelm
062de45899 Add support for MPI-3.1 MPI_Aint functions
This commit adds support for MPI_Aint_add and MPI_Aint_diff. These
functions are implemented as macros in C (explicitly allowed by
MPI-3.1). The fortran implementations are a similar mess to the
MPI_Wtime implementations.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-06-09 09:31:33 -06:00
Gilles Gouaillardet
bf38f82dc2 MPI_Win_{get,set}_info: add missing files
fixes commit open-mpi/ompi@558d34a5c3
2015-06-03 09:04:04 +09:00
Gilles Gouaillardet
7179d442c0 MPI_Win_{attach,detach}: add missing files
fixes commit open-mpi/ompi@9600e2bc63
2015-06-03 09:02:50 +09:00
Gilles Gouaillardet
1d8ce96305 MPI_Win_Create_dynamic: add missing files
fixes commit open-mpi/ompi@f45244d5a5
2015-06-03 09:00:04 +09:00
Nathan Hjelm
632f829eb7 mpit: fix coverity issues
CID 1047284 Uninitialized scalar variable (UNINIT)
CID 1047285 Uninitialized scalar variable (UNINIT)
CID 1047286 Uninitialized scalar variable (UNINIT)

If a performance variable session has no handles we should be returning MPI_SUCCESS
for MPI_T_pvar_start, MPI_T_pvar_stop, and MPI_T_pvar_reset. The code was returning
an unitialized value. This commit also updates the error code to return the proper
error on failure.

Signed-off-by: Nathan Hjelm <hjelmn@me.com>
2015-06-02 09:15:53 -06:00
Gilles Gouaillardet
558d34a5c3 MPI_Win_{get,set}_info : add Fortran bindings 2015-06-02 17:45:52 +09:00
Gilles Gouaillardet
9600e2bc63 MPI_Win_{attach,detach} : add Fortran bindings 2015-06-02 17:45:44 +09:00
Gilles Gouaillardet
f45244d5a5 MPI_Win_create_dynamic : add Fortran bindings 2015-06-02 17:45:32 +09:00
Nathan Hjelm
b1c100c402 win_get_info: fix indentation
Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2015-05-29 10:16:25 -06:00