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Ralph Castain
b118779c08 It is okay for us to init the ORTE mca params multiple times. Indeed, it is absolutely required by orterun as the first time has to be done prior to parsing the command line, which means that the mca values haven't been parsed yet!
Add ability for sys admins to prohibit putting session directories under specified locations. Thus, they can now protect parallel file systems from foolish user mistakes.

This commit was SVN r18721.
2008-06-24 17:50:56 +00:00
Ralph Castain
0532d799d6 Complete implementation of the --without-rte-support configure option. Working with Brian, this has been tested on RedStorm.
Some minor changes to help facilitate debugger support so that both mpirun and yod can operate with it. Still to be completed.

This commit was SVN r18664.
2008-06-18 03:15:56 +00:00
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
Ralph Castain
0da811ce79 Initial work on xml support - allocation and job map outputs completed. More to come.
This commit was SVN r18587.
2008-06-04 20:53:12 +00:00
Ralph Castain
c992e99035 Remove the tags from orte_output_open and the filtering operation from orte_output - this will be handled differently to improve the XML output interface
This commit was SVN r18557.
2008-06-03 14:24:01 +00:00
Ralph Castain
b456fb2d42 Upgrade the node/orted failure detection code to cover all environments. Use the native environment's capabilities where possible - e.g., SLURM detects orted failure and can report it. Elsewhere, use a heartbeat system to detect orted failure - e.g., for TM and rsh. Heart rate is set via mca param. The HNP checks for callback every 2*heartrate, declares orted failure if not seen in last 2*heartrate time.
Also detect orted failed-to-start by setting timeout on launch. Currently only used in TM launcher.

Neither detection is enabled by default, but are only active if heartrate is set and/or launch timeout is set. Exception for SLURM as orted failure is always detected and reported.

More info to come on devel list.

This commit was SVN r18555.
2008-06-02 21:46:34 +00:00
Ralph Castain
72530f8fed Cleanly handle the failed start of an orted, or its unexpected failure after start. This commit will allow mpirun to exit cleanly when this occurs, and does a best-effort attempt to cleanup the mess. However, it still has two unresolved issues that need to be eventually addressed:
1. it depends upon the ability of the native environment to alert us that the orted has died/failed to start. I have included that support for SLURM, but other environments need to be done.

2. for some yet-to-be-determined reason, the message that tells the remaining daemons to "die" isn't getting out of the RML, even though no obvious blockage is standing in the way. Work will continue on resolving that problem. For now, the orteds appear to be exiting on their own quite nicely when they see their HNP "lifeline" disappear.

This represents the best-available fix for ticket #221 so I am closing that ticket at this time.

This commit was SVN r18536.
2008-05-29 13:38:27 +00:00
Ralph Castain
828ae26d90 ORTE-level MCA params are defined in several places. Ompi_info cannot call orte_init due to an issue with the memory allocator, thus making it impossible for ompi_info to display all of the ORTE-level MCA params.
By consolidating them all into one function, ompi_info can call that function and register the desired variables. This also requires, however, that ompi_info call orte_output_init to avoid generating tons of error messages, so make that adjustment too. 

Fixes ticket #1314

In addition, orte_output has a race condition issue whereby calls to orte_output/verbose can occur prior to either the RML being defined/setup, or the HNP being defined. This latter occurs during the initialization of the orte_process_info structure. In both cases, there is no way orte_output can send the output to the HNP. Hence, the message must be simply output locally.

Fixes ticket #1315

This commit was SVN r18524.
2008-05-28 13:29:58 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Ralph Castain
b2c73f6e11 Fix tree-spawn to work within the new modex system
This commit was SVN r18349.
2008-05-01 19:19:34 +00:00
Ralph Castain
3e55fe6f6d Fold in the revised modex scheme. Move the ompi_proc_t modex portions to the RTE level since the daemons already have that info. Provide each process with the equivalent of a "nidmap" - both a map of what nodes are in the job, and a map of which node each process is on. This enables the use of static ports, though that hasn't been turned "on" in this commit.
Update the rsh tree spawn capability so we spawn the next wave of daemons before launching our own local procs.

Add an ability to encode nodenames for large clusters with contiguous node name numbering schemes - this allows communication of all node names in a few bytes instead of tens-of-bytes/node.

This commit was SVN r18338.
2008-04-30 19:49:53 +00:00
Ralph Castain
e7487ad533 Implement the seq rmaps module that sequentially maps process ranks to a list hosts in a hostfile.
Restore the "do-not-launch" functionality so users can test a mapping without launching it.

Add a "do-not-resolve" cmd line flag to mpirun so the opal/util/if.c code does not attempt to resolve network addresses, thus enabling a user to test a hostfile mapping without hanging on network resolve requests.

Add a function to hostfile to generate an ordered list of host names from a hostfile

This commit was SVN r18190.
2008-04-17 13:50:59 +00:00
Ralph Castain
7c7304466c Add a binomial tree-based launch to ssh, turned "on" only when the plm_rsh_tree_spawned mca param is set to a non-zero value. This probably isn't a very optimized capability, but it does execute a tree-based launch that may scale better than linear at high node counts.
Add the daemon map capability to the ODLS to create and save a map of daemon vpid vs nodename from the launch message.

Cleanup a few places in the base plm launch support where we didn't adequately protect rml recv's from potentially executing sends.

This commit was SVN r18143.
2008-04-14 18:26:08 +00:00
Ralph Castain
3a0d09300b Fully implement the inbound binomial allgather for daemon-based collectives. Supports both modex and barrier operations.
Comm_spawn still uses the rank=0 method - shifting that algo to the daemons is under study.

This commit was SVN r18115.
2008-04-09 22:10:53 +00:00
Ralph Castain
537395b924 Make two important MCA params "visible" to ompi_info
This commit was SVN r18074.
2008-04-02 14:54:57 +00:00
Ralph Castain
8dca132604 Cleanup some ignores
Add missing variables!

This commit was SVN r18063.
2008-04-01 20:32:17 +00:00
Ralph Castain
6fcaa8df39 Remove stale define. Add global variable to be used soon.
This commit was SVN r18005.
2008-03-28 02:20:37 +00:00
Lenny Verkhovsky
13ff2a0f34 local declaration instead of using global variable
This commit was SVN r17876.
2008-03-19 13:04:40 +00:00
Ralph Castain
629b95a2fe Afraid this has a couple of things mixed into the commit. Couldn't be helped - had missed one commit prior to running out the door on vacation.
Fix race conditions in abnormal terminations. We had done a first-cut at this in a prior commit. However, the window remained partially open due to the fact that the HNP has multiple paths leading to orte_finalize. Most of our frameworks don't care if they are finalized more than once, but one of them does, which meant we segfaulted if orte_finalize got called more than once. Besides, we really shouldn't be doing that anyway.

So we now introduce a set of atomic locks that prevent us from multiply calling abort, attempting to call orte_finalize, etc. My initial tests indicate this is working cleanly, but since it is a race condition issue, more testing will have to be done before we know for sure that this problem has been licked.

Also, some updates relevant to the tool comm library snuck in here. Since those also touched the orted code (as did the prior changes), I didn't want to attempt to separate them out - besides, they are coming in soon anyway. More on them later as that functionality approaches completion.

This commit was SVN r17843.
2008-03-17 17:58:59 +00:00
Ralph Castain
097cc83be2 Fix a race condition - ensure we don't call terminate in orterun more than once, even if the timeout fires while we are doing so
This commit was SVN r17766.
2008-03-06 19:35:57 +00:00
Tim Prins
f9916811ae Make it so we do not mangle the options the user passes to their executeable. Fixes trac:1124
The change also:
 - cleans up and simplifies the command line processing code
 - adds an error output if more than one hostfile passed for a single app context
 - gets rid of the superfluous orte_app_context_map_t type, and instead use a simple argv of -host options

This commit was SVN r17750.

The following Trac tickets were found above:
  Ticket 1124 --> https://svn.open-mpi.org/trac/ompi/ticket/1124
2008-03-05 22:12:27 +00:00
Ralph Castain
edb8e32a7a Add default hostfile parameter plus --default-hostfile command line option.
Fix error message when job setup failed

This commit was SVN r17724.
2008-03-05 04:54:57 +00:00
George Bosilca
9d421bea2a Replace all occurences of orte_pointer_array by opal_pointer_array. Remove the
implementation of orte_pointer_array.

This commit was SVN r17636.
2008-02-28 05:32:23 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00