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6893 Коммитов

Автор SHA1 Сообщение Дата
Artem Polyakov
7984d7d997 opal/common/ucx: Remove unused debugging macro
Will be reintroduced later if needed and after adaptation to the OMPI
infrastructure.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Artem Polyakov
43f16d8796 opal/common/ucx: Remove common_ucx_int.h
Place the content of common_ucx_int.h back to the common_ucx.h and
include common_ucx_wpool.h explicitly.

Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Xin Zhao
c6de09940f ompi/osc/ucx: Switch osc/ucx code to use Worker Pool.
Signed-off-by: Artem Polyakov <artpol84@gmail.com>
2019-02-19 14:22:07 -08:00
Yossi Itigin
91d05f91e2
Merge pull request #6384 from brminich/topic/ucx_worker_net_address
PML/UCX: Use net worker address for remote peers
2019-02-17 12:21:00 +02:00
Matias A Cabral
25bdd118ac MTL_OFI: Changed Recv cancel to be non-blocking
Updated the OFI MTL's Recv cancel to be a non-blocking call to match
the MPI spec. Given fi_cancel succeeded, then it is expected that the
user will wait on the request to read the result of if the cancel has
completed.

Signed-off-by: Spruit, Neil R <neil.r.spruit@intel.com
2019-02-14 17:07:20 -05:00
Mikhail Brinskii
751d88192d PML/UCX: Use net worker address for remote peers
For remote node peers pack smaller worker address, which contains
network device addresses only. This would reduce amount of OOB traffic
during startup.

Signed-off-by: Mikhail Brinskii <mikhailb@mellanox.com>
2019-02-14 18:06:36 +02:00
Brian Barrett
7a593cea4a
Merge pull request #6361 from aravindksg/fix_tg_segfault
mtl/ofi: Fix segfault when not using Thread-Grouping feature
2019-02-12 12:04:26 -08:00
KAWASHIMA Takahiro
8bbd201029
Merge pull request #6205 from kawashima-fj/pr/fp16
Add FP16 datatypes
2019-02-08 14:52:13 +09:00
Aravind Gopalakrishnan
6edcc479c4 mtl/ofi: Fix segfault when not using Thread-Grouping feature
For the non thread-grouping paths, only the first (0th) OFI context
should be used for communication. Otherwise this would access a non existant
array item and cause segfault.

While at it, clarifiy some content regarding SEPs in README (Credit to Matias Cabral
for README edits).

Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
2019-02-07 11:52:53 -08:00
Jeff Squyres
f5e1a672cc ofi: revamp OPAL_CHECK_OFI configury
Update the OPAL_CHECK_OFI configury macro:

- Make it safe to call the macro multiple times:
  - The checks only execute the first time it is invoked
  - Subsequent invocations, it just emits a friendly "checking..."
    message so that configure output is sensible/logical
- With the goal of ultimately removing opal/mca/common/ofi, rename the
  output variables from OPAL_CHECK_OFI to be
  opal_ofi_{happy|CPPFLAGS|LDFLAGS|LIBS}.
- Update btl/ofi, btl/usnic, and mtl/ofi for these new conventions.
- Also, don't use AC_REQUIRE to invoke OPAL_CHECK_OFI because that
  causes the macro to be invoked at a fairly random time, which makes
  configure stdout confusing / hard to grok.
- Remove a little left-over kruft in OPAL_CHECK_OFI, too (which
  resulted in an indenting change, making the change to
  opal_check_ofi.m4 look larger than it really is).

Thanks Alastair McKinstry for the report and initial fix.
Thanks Rashika Kheria for the reminder.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-02-07 06:29:58 -08:00
Jeff Squyres
aba2571881 mtl/ofi/Makefile.am: down with tabs!
Replace all tabs with spaces.  No code or logic changes.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2019-02-07 06:29:58 -08:00
Gilles Gouaillardet
945f830f7a mtl/ofi: fix configury when VPATH is used
Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-02-07 06:29:58 -08:00
Matias Cabral
0601b3e982
Merge pull request #6325 from aravindksg/fix_help_reference
mtl/ofi: Fix reference to help text object
2019-02-05 07:22:51 -08:00
KAWASHIMA Takahiro
4d7bde27fb ompi/datatype: Use short float for MPI_REAL2
... and add `MPI_COMPLEX4`.

This commit changes values of existing `OMPI_DATATYPE_MPI_*` macros.
This change does not affect ABI compatibility of `libmpi.so` and the
like because these values are only used in OMPI internal code.

On the other hand, `ompi_datatype_t::id` values of existing datatypes
are not changed and 73 is newly assigned to for `MPI_COMPLEX4` to
retain ABI compatibility.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-01 13:01:10 +09:00
KAWASHIMA Takahiro
4375c11a58 ompi/datatype: Add ompi_mpi_short_float
... and `ompi_mpi_c_short_float_complex` and `ompi_mpi_cxx_sfltcplex`.

These are Open MPI internal variables intended to be defined as
`MPI_SHORT_FLOAT`, `MPI_C_SHORT_FLOAT_COMPLEX`, and
`MPI_CXX_SHORT_FLOAT_COMPLEX` in the future.

`OMPI_DATATYPE_MPI_C_SHORT_FLOAT_COMPLEX` is also required to
support `MPI_COMPLEX4` in the next commit.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-01 12:43:13 +09:00
Sergey Lebedev
829846dbcc fp16 hcoll bindings
Signed-off-by: Sergey Lebedev <sergeyle@mellanox.com>
2019-02-01 12:40:14 +09:00
KAWASHIMA Takahiro
f6b39452f6 opal/datatype: Support short float
The type `short float` is proposed for the C language in ISO/IEC JTC
1/SC 22 WG 14 (C WG) for mainly IEEE 754-2008 binary16, a.k.a.
half-precision floating point or FP16.

By this commit, `short float` and `short float _Complex` are detected
in `configure` and used in Open MPI internal code. `MPI_SHORT_FLOAT`
and its complex number version are not added yet.

This commit changes values of existing `OPAL_DATATYPE_*` macros.
This change does not affect ABI compatibility of `libmpi.so` and the
like because these values are only used in OPAL and OMPI internal code.

Signed-off-by: KAWASHIMA Takahiro <t-kawashima@jp.fujitsu.com>
2019-02-01 12:40:14 +09:00
Thananon Patinyasakdikul
782ec851ea
Merge pull request #6319 from thananon/pr/allow_overtake
pml/ob1: fix deadlock with communicator flag ALLOW_OVERTAKE.
2019-01-30 15:32:04 -05:00
Jeff Squyres
2203f8d900
Merge pull request #6185 from ggouaillardet/topic/hwloc_macros
hwloc: remove public hwloc macros from opal_config.h
2019-01-30 07:32:22 -05:00
Gilles Gouaillardet
0aeb27f776 topo/treematch: silence a hwloc related warning
treematch/km_partitioning.c #include "config.h",
but there is no such file when the embedded treematch is used.

In order to prevent the embedded treematch from incorrectly using
the config.h from the embedded hwloc, generate a dummy config.h.

Signed-off-by: Gilles Gouaillardet <gilles@rist.or.jp>
2019-01-30 14:51:38 +09:00
Aravind Gopalakrishnan
9cabcfdbba mtl/ofi: Fix reference to help text object
When we exceed the threshold number of contexts created, print appropriate help
text

Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
2019-01-29 15:10:06 -08:00
Thananon Patinyasakdikul
0263456cf4 pml/ob1: fix deadlock with communicator flag ALLOW_OVERTAKE.
We missed an assert to check if ALLOW_OVERTAKE is set or not before
validating the sequence number and this will cause deadlock.

Signed-off-by: Thananon Patinyasakdikul <tpatinya@utk.edu>
2019-01-29 14:55:06 -05:00
Brian Barrett
23da9fac23
Merge pull request #6294 from bwbarrett/mtl-ofi-no-device-warning
mtl/ofi: Print descriptive error message on modex failure
2019-01-29 08:32:49 -08:00
Brian Barrett
1bb7a73a9c
Merge pull request #6302 from bwbarrett/feature/ofi-av-count
mtl/ofi: Provide av count hint during initialization
2019-01-29 08:32:24 -08:00
Brian Barrett
44be7f139a mtl/ofi: Provide av count hint during initialization
Provide the av_attr.count hint (number of addresses that will be
inserted into the address vector through the life of the process)
at initialization of the address vector.  It's ok to be a bit
wrong, but some endpoints (RxR) can benefit by not going through
the slow growth realloc churn.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2019-01-24 15:47:24 -08:00
Edgar Gabriel
c0f8ce0fff common/ompio: fix a floating point division problem
This commit fixes  a problem reported on the mailing list with
individual writes larger than 512 MB.

The culprit is a floating point division of two large, close values.
Changing the datatypes from float to double (which is what is being
used in the fcoll components) fixes the problem.

See issue #6285 and

 https://forum.hdfgroup.org/t/cannot-write-more-than-512-mb-in-1d/5118

Thanks for Axel Huebl and René Widera for reporting the issue.

Signed-off-by: Edgar Gabriel <egabriel@central.uh.edu>
2019-01-21 17:59:12 -06:00
Brian Barrett
fe25097194 mtl/ofi: Print descriptive error message on modex failure
With MTLs, there's no "other transport" when the remote side
does not have an active NIC, so we should print a useful error
message when the modex failed (indicating lack of a NIC on
the remote side).

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2019-01-21 23:50:31 +00:00
René Widera
a91fab80a1 common/ompio: possible rounding issue
Similar to #6286 rounding number of bytes into a single precision floating point value to round up the result of a division is a potential risk due to rounding errors.

- remove floating point operations for `round up`
- removes floating point conversion for round down (native behavior of integer division)

Signed-off-by: René Widera <r.widera@hzdr.de>
2019-01-18 14:05:23 +01:00
Yossi Itigin
387b2ff56f
Merge pull request #6260 from hoopoepg/topic/removed-fca
COLL: removed FCA component
2019-01-17 00:05:07 +08:00
Aravind Gopalakrishnan
37f9aff2a0 mtl/ofi: Add MCA variables to enable SEP and to request number of OFI contexts
Moving to a model where we have users actively _enable_ SEP feature for use
rather than opening SEP by default if provider supports it. This allows us to
not regress (either functionally or for performance reasons) any apps that were
working correctly on regular endpoints.

Also, providing MCA to specify number of OFI contexts to create and default
this value to 1 (Given btl/ofi also creates one by default, this reduces the
incidence of a scenario where we allocate all available contexts by default and
if btl/ofi asks for one more, then provider breaks as it doesn't support it).

While at it, spruce up README on SEP content.

Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
2019-01-14 09:58:36 -08:00
Ralph Castain
d1fd1f4cce
Merge pull request #6151 from nrspruit/ns_ompi_mtl_ofi_specializations
MTL_OFI: Generation of specialized functions at build time
2019-01-14 09:31:54 -08:00
Sergey Oblomov
0759bb8561 COLL: removed FCA component
- removed FCA collectives from coll/scoll

Signed-off-by: Sergey Oblomov <sergeyo@mellanox.com>
2019-01-09 16:51:40 +02:00
Jeff Squyres
17be4c6d1f
Merge pull request #6229 from jsquyres/pr/fix-enable-grequest-extension-in-a-tarball
romio321: ensure to distribute ompi_grequestx.h
2018-12-28 16:15:23 -05:00
Jeff Squyres
62321be186 romio321: ensure to distribute ompi_grequestx.h
Refs https://github.com/open-mpi/ompi/issues/6227.  Thanks to
@georgemarselis for reporting.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-12-27 15:39:47 -08:00
bosilca
96f88052e9
Merge pull request #5948 from mkurnosov/coll-ireduce-silence-coverity
coll/libnbc/ireduce: silence Coverity warning CID 1440360
2018-12-24 12:59:16 -05:00
bosilca
593db292da
Merge pull request #5644 from mkurnosov/coll-iallreduce-rabenseifner
coll/libnbc: add Rabenseifner's algorithm for MPI_Iallreduce
2018-12-24 12:58:21 -05:00
Aurelien Bouteiller
bd0d2b832e
Merge pull request #6086 from ICLDisco/export/errors_nbc
Manage errors in NBC collective ops
2018-12-21 02:34:00 -05:00
Jeff Squyres
e9a6246b90 treematch: fix global common symbol
Despite its name, this symbol doesn't need to be global.  So just make
it static.

Signed-off-by: Jeff Squyres <jsquyres@cisco.com>
2018-12-20 11:06:14 -08:00
Nathan Hjelm
06baa518f7 rte/pmix: fill in opal_process_info when using prrte/pmix
This commit fixes a bug when launching with prun where the process
info structures used by the btls are not populated.

Signed-off-by: Nathan Hjelm <hjelmn@lanl.gov>
2018-12-13 16:04:31 -07:00
bosilca
804a517929
Merge pull request #6146 from bosilca/topic/treematch_update
Update to the latest TreeMatch (v1.3).
2018-12-13 13:26:40 -05:00
Spruit, Neil R
bef5f50a42 MTL_OFI: Generation of specialized functions at build time
-> Added new targets in Makefile.am to call a new build script
   generate-opt-funcs.pl to generate specialized functions for
   each *.pm file.

-> Added new perl module *.pm files for send,isend,irecv,iprobe,improbe
   which are loaded by generate-opt-funcs.pl to create new source files
   that correspond to the name of the .pm file to be used as part of
   MTL OFI.

-> Added mtl_ofi_opt.pm.template and updated README with details on the
   specialization features and how to add additional specialization
   support.

-> Added new opt_common/mtl_ofi_opt_common.pm containing common
   functions for generating the specialized functions used by
   all other *.pm modules.

-> Added new mtl_ofi.h which includes the definitions for the
   function symbol table for storing the specialized functions along
   with the definitions for the initialization functions for the
   corresponding function pointers.

-> Based off the OFI provider capabilities the specialized function
   pointers are assigned at mtl_ofi_component_init to the corresponding
   MTL OFI function.

-> mca_mtl_ofi_module_t has been updated with the symbol table
   struct which is assigned at component init.

Signed-off-by: Spruit, Neil R <neil.r.spruit@intel.com>
2018-12-13 00:35:19 -08:00
Aravind Gopalakrishnan
e5e19dfcf7 Fix for SEP when num local procs is greater than available contexts
For cases when the number of local processes is greater than the number of
available contexts, the SEP initialization phase would calculate the number of
contexts to provision for each rank to be 0 and would eventually crash.

Fix the issue here by using regular endpoints in the event the number of local
processes is more than available contexts. This fixes issue #6182.

Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
2018-12-12 16:49:04 -08:00
Brian Barrett
6e15128d96 mtl/ofi: Fix crash if no providers found
Commit 109d0569ffd introduced a crash when an error occurred
before ofi_ctxt was allocated, including when no providers
passed the selection logic.  Properly check that the pointer
is not NULL in the error cleanup code before dereferencing
the pointer.

Signed-off-by: Brian Barrett <bbarrett@amazon.com>
2018-12-11 15:46:18 -08:00
Matias A Cabral
c76c6d8b28 MTL/PSM2: add missing default priority
Missing default priority after PR #6153

Signed-off-by: Matias Cabral <matias.a.cabral@intel.com>
2018-12-07 14:46:34 -08:00
George Bosilca
74f2365d6e
Remove most (all) warnings from the new TreeMatch.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-12-05 15:38:39 -05:00
Guillaume Mercier
27aa34e53f
New version based on TM 1.3
Optimize_topology is commented for now until bug resolved in TM

Signed-off-by: Guillaume Mercier <guillaume.mercier@bordeaux-inp.fr>
2018-12-05 15:38:39 -05:00
Matias A Cabral
fc8582c560 MTL/PSM2: Do not lower the priority when all processes are local.
The intention of lowering the priority when all processes are local
was to favor Vader BTL. However, in builds including the OFI MTL it
gets selected instead.

Reviewed-by: Spruit, Neil R <neil.r.spruit@intel.com>
Reviewed-by: Gopalakrishnan, Aravind <aravind.gopalakrishnan@intel.com>
Signed-off-by: Matias Cabral <matias.a.cabral@intel.com>
2018-12-04 15:31:09 -08:00
Matias Cabral
abd34620f4
Merge pull request #5972 from aravindksg/ofi_sep_master
MTL/OFI: Add OFI Scalable Endpoint support
2018-12-04 13:07:44 -08:00
Aravind Gopalakrishnan
109d0569ff MTL/OFI: Add OFI Scalable Endpoint support
OFI MTL supports OFI Scalable Endpoints feature as means to improve
multi-threaded application throughput and message rate. Currently the feature
is designed to utilize multiple TX/RX contexts exposed by the OFI provider in
conjunction with a multi-communicator MPI application model. For more
information, refer to README under mtl/ofi.

Reviewed-by: Matias Cabral <matias.a.cabral@intel.com>
Reviewed-by: Neil Spruit <neil.r.spruit@intel.com>
Signed-off-by: Aravind Gopalakrishnan <Aravind.Gopalakrishnan@intel.com>
2018-12-03 09:56:52 -08:00
George Bosilca
c6f73e8883
First step of the integration with the new TreeMatch.
Signed-off-by: George Bosilca <bosilca@icl.utk.edu>
2018-12-02 20:05:03 -05:00