1
1
Граф коммитов

124 Коммитов

Автор SHA1 Сообщение Дата
Jeff Squyres
f09dc4be31 Fix one item missed by r19175.
This commit was SVN r19216.

The following SVN revision numbers were found above:
  r19175 --> open-mpi/ompi@e105b3f254
2008-08-07 14:49:27 +00:00
Rolf vandeVaart
e105b3f254 Finish work related to ticket #1392 where the versions
were bumped from v1.0.0 to v2.0.0.  

This change fixed #1439.

This commit was SVN r19175.
2008-08-06 12:16:54 +00:00
Jeff Squyres
0af7ac53f2 Fixes trac:1392, #1400
* add "register" function to mca_base_component_t
   * converted coll:basic and paffinity:linux and paffinity:solaris to
     use this function
   * we'll convert the rest over time (I'll file a ticket once all
     this is committed)
 * add 32 bytes of "reserved" space to the end of mca_base_component_t
   and mca_base_component_data_2_0_0_t to make future upgrades
   [slightly] easier
   * new mca_base_component_t size: 196 bytes
   * new mca_base_component_data_2_0_0_t size: 36 bytes
 * MCA base version bumped to v2.0
   * '''We now refuse to load components that are not MCA v2.0.x'''
 * all MCA frameworks versions bumped to v2.0
 * be a little more explicit about version numbers in the MCA base
   * add big comment in mca.h about versioning philosophy

This commit was SVN r19073.

The following Trac tickets were found above:
  Ticket 1392 --> https://svn.open-mpi.org/trac/ompi/ticket/1392
2008-07-28 22:40:57 +00:00
Jeff Squyres
a7c79558ad Remove an errant printf that was causing non-fatal errors to be
displayed (e.g., when deleting files that should have been silently
ignored if they didn't exist).

This commit was SVN r19071.
2008-07-28 22:11:31 +00:00
Jeff Squyres
c93f1d8c5e Fixes trac:1419: got a patch from upstream to fix the "OS X doesn't
have/need lseek64" issue.  This fix is also included in MPICH2 after
v1.0.7.

This commit was SVN r19070.

The following Trac tickets were found above:
  Ticket 1419 --> https://svn.open-mpi.org/trac/ompi/ticket/1419
2008-07-28 17:02:53 +00:00
Jeff Squyres
7c4d46a8d9 Grrr: I ''did'' remove these files on the initial commit of the new
SVN version (r19045), but I also edited the svn:ignore to ignore these
files in the same SVN commit -- I suspect that SVN got confused and
did not actually delete them.

This commit was SVN r19048.

The following SVN revision numbers were found above:
  r19045 --> open-mpi/ompi@63b63d48c3
2008-07-26 13:00:24 +00:00
Jeff Squyres
6dac4706ea Somehow this file got missed in the SVN import.
This commit was SVN r19047.
2008-07-26 12:54:15 +00:00
Jeff Squyres
63b63d48c3 Fixes trac:1370, #1147
Update the version of ROMIO to that which was contained in
MPICH2-1.0.7, plus a few patches from the upstream ROMIO maintainers
(because OMPI uses a few code paths in ROMIO that MPICH2 does not;
there were a few compile bugs in the ROMIO from MPICH2-1.0.7).

Added an info MCA param to be able to tell which version of ROMIO is
contained in OMPI: io_romio_version.

Many, many thanks to romio-maint@mcs.anl.gov for all their help in
integrating this new version of ROMIO into Open MPI.

This commit was SVN r19045.

The following Trac tickets were found above:
  Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
2008-07-26 12:23:30 +00:00
Jeff Squyres
83987fea75 Next step: Back out r17543 (ficxing a bunch of ROMIO warnings). Let's
see how the next gen panasas stuff does in terms of warnings; we can
always re-merge this later if we want to.  It's just easier if we have
as little OMPI-specific code as possible (particularly when we know
that the panasas code has some big changes coming).

This commit was SVN r18823.

The following SVN revision numbers were found above:
  r17543 --> open-mpi/ompi@b4ec81a9fd
2008-07-07 23:22:26 +00:00
Jeff Squyres
09ff80ff06 Back out r16691 and r16693 because the meat of them are upstream
already, and we're just about to do a ROMIO version refresh -- so the
less OMPI-specific code we have (e.g., indenting and whatnot), the
better. 

Refs trac:1370.

This commit was SVN r18821.

The following SVN revision numbers were found above:
  r16691 --> open-mpi/ompi@8dca19cb3b
  r16693 --> open-mpi/ompi@037a533752

The following Trac tickets were found above:
  Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
2008-07-07 22:33:49 +00:00
Jeff Squyres
a6cfe0c574 Remove LANL-specific Panasas patches. This is step 1 in upgrading the
ROMIO in Open MPI (the new version of ROMIO will make this patch
defunct, and David Daniel has confirmed that no one at LANL is using
this functionality, anyway).

Refs trac:1370.

This commit was SVN r18819.

The following Trac tickets were found above:
  Ticket 1370 --> https://svn.open-mpi.org/trac/ompi/ticket/1370
2008-07-07 22:08:26 +00:00
Ralph Castain
9613b3176c Effectively revert the orte_output system and return to direct use of opal_output at all levels. Retain the orte_show_help subsystem to allow aggregation of show_help messages at the HNP.
After much work by Jeff and myself, and quite a lot of discussion, it has become clear that we simply cannot resolve the infinite loops caused by RML-involved subsystems calling orte_output. The original rationale for the change to orte_output has also been reduced by shifting the output of XML-formatted vs human readable messages to an alternative approach.

I have globally replaced the orte_output/ORTE_OUTPUT calls in the code base, as well as the corresponding .h file name. I have test compiled and run this on the various environments within my reach, so hopefully this will prove minimally disruptive.

This commit was SVN r18619.
2008-06-09 14:53:58 +00:00
Ralph Castain
c992e99035 Remove the tags from orte_output_open and the filtering operation from orte_output - this will be handled differently to improve the XML output interface
This commit was SVN r18557.
2008-06-03 14:24:01 +00:00
George Bosilca
e361bcb64c Send optimizations.
1. The send path get shorter. The BTL is allowed to return > 0 to specify that the
   descriptor was pushed to the networks, and that the memory attached to it is 
   available again for the upper layer. The MCA_BTL_DES_SEND_ALWAYS_CALLBACK flag
   can be used by the PML to force the BTL to always trigger the callback.
   Unmodified BTL will continue to work as expected, as they will return OMPI_SUCCESS
   which force the PML to have exactly the same behavior as before. Some BTLs have
   been modified: self, sm, tcp, mx.
2. Add send immediate interface to BTL.
   The idea is to have a mechanism of allowing the BTL to take advantage of
   send optimizations such as the ability to deliver data "inline". Some
   network APIs such as Portals allow data to be sent using a "thin" event
   without packing data into a memory descriptor. This interface change
   allows the BTL to use such capabilities and allows for other optimizations
   in the future. All existing BTLs except for Portals and sm have this interface
   set to NULL.

This commit was SVN r18551.
2008-05-30 03:58:39 +00:00
Jeff Squyres
e7ecd56bd2 This commit represents a bunch of work on a Mercurial side branch. As
such, the commit message back to the master SVN repository is fairly
long.

= ORTE Job-Level Output Messages =

Add two new interfaces that should be used for all new code throughout
the ORTE and OMPI layers (we already make the search-and-replace on
the existing ORTE / OMPI layers):

 * orte_output(): (and corresponding friends ORTE_OUTPUT,
   orte_output_verbose, etc.)  This function sends the output directly
   to the HNP for processing as part of a job-specific output
   channel.  It supports all the same outputs as opal_output()
   (syslog, file, stdout, stderr), but for stdout/stderr, the output
   is sent to the HNP for processing and output.  More on this below.
 * orte_show_help(): This function is a drop-in-replacement for
   opal_show_help(), with two differences in functionality:
   1. the rendered text help message output is sent to the HNP for
      display (rather than outputting directly into the process' stderr
      stream)
   1. the HNP detects duplicate help messages and does not display them
      (so that you don't see the same error message N times, once from
      each of your N MPI processes); instead, it counts "new" instances
      of the help message and displays a message every ~5 seconds when
      there are new ones ("I got X new copies of the help message...")

opal_show_help and opal_output still exist, but they only output in
the current process.  The intent for the new orte_* functions is that
they can apply job-level intelligence to the output.  As such, we
recommend that all new ORTE and OMPI code use the new orte_*
functions, not thei opal_* functions.

=== New code ===

For ORTE and OMPI programmers, here's what you need to do differently
in new code:

 * Do not include opal/util/show_help.h or opal/util/output.h.
   Instead, include orte/util/output.h (this one header file has
   declarations for both the orte_output() series of functions and
   orte_show_help()).
 * Effectively s/opal_output/orte_output/gi throughout your code.
   Note that orte_output_open() takes a slightly different argument
   list (as a way to pass data to the filtering stream -- see below),
   so you if explicitly call opal_output_open(), you'll need to
   slightly adapt to the new signature of orte_output_open().
 * Literally s/opal_show_help/orte_show_help/.  The function signature
   is identical.

=== Notes ===

 * orte_output'ing to stream 0 will do similar to what
   opal_output'ing did, so leaving a hard-coded "0" as the first
   argument is safe.
 * For systems that do not use ORTE's RML or the HNP, the effect of
   orte_output_* and orte_show_help will be identical to their opal
   counterparts (the additional information passed to
   orte_output_open() will be lost!).  Indeed, the orte_* functions
   simply become trivial wrappers to their opal_* counterparts.  Note
   that we have not tested this; the code is simple but it is quite
   possible that we mucked something up.

= Filter Framework =

Messages sent view the new orte_* functions described above and
messages output via the IOF on the HNP will now optionally be passed
through a new "filter" framework before being output to
stdout/stderr.  The "filter" OPAL MCA framework is intended to allow
preprocessing to messages before they are sent to their final
destinations.  The first component that was written in the filter
framework was to create an XML stream, segregating all the messages
into different XML tags, etc.  This will allow 3rd party tools to read
the stdout/stderr from the HNP and be able to know exactly what each
text message is (e.g., a help message, another OMPI infrastructure
message, stdout from the user process, stderr from the user process,
etc.).

Filtering is not active by default.  Filter components must be
specifically requested, such as:

{{{
$ mpirun --mca filter xml ...
}}}

There can only be one filter component active.

= New MCA Parameters =

The new functionality described above introduces two new MCA
parameters:

 * '''orte_base_help_aggregate''': Defaults to 1 (true), meaning that
   help messages will be aggregated, as described above.  If set to 0,
   all help messages will be displayed, even if they are duplicates
   (i.e., the original behavior).
 * '''orte_base_show_output_recursions''': An MCA parameter to help
   debug one of the known issues, described below.  It is likely that
   this MCA parameter will disappear before v1.3 final.

= Known Issues =

 * The XML filter component is not complete.  The current output from
   this component is preliminary and not real XML.  A bit more work
   needs to be done to configure.m4 search for an appropriate XML
   library/link it in/use it at run time.
 * There are possible recursion loops in the orte_output() and
   orte_show_help() functions -- e.g., if RML send calls orte_output()
   or orte_show_help().  We have some ideas how to fix these, but
   figured that it was ok to commit before feature freeze with known
   issues.  The code currently contains sub-optimal workarounds so
   that this will not be a problem, but it would be good to actually
   solve the problem rather than have hackish workarounds before v1.3 final.

This commit was SVN r18434.
2008-05-13 20:00:55 +00:00
Ralph Castain
48e5840c50 Restore a placeholder to make non-SVN SCM's happy.
This commit was SVN r17648.
2008-02-28 20:19:22 +00:00
George Bosilca
678e6c7f0d This is a Mercurial file.
This commit was SVN r17635.
2008-02-28 05:18:06 +00:00
Ralph Castain
d70e2e8c2b Merge the ORTE devel branch into the main trunk. Details of what this means will be circulated separately.
Remains to be tested to ensure everything came over cleanly, so please continue to withhold commits a little longer

This commit was SVN r17632.
2008-02-28 01:57:57 +00:00
Ralph Castain
b4ec81a9fd Fix the Panasas support in ROMIO so it builds without complaints. Required a patch from Brian, plus a few edits by me to remove warnings.
NOTE: the code provided by PANASAS includes a "switch" that they left incomplete - it doesn't cover all possibilities. Since the value being switched is an enum, this causes problems for the compiler. I added the missing values, but - since Panasas felt they could be ignored - had the switch generate an error if those cases ever occurred.

This commit was SVN r17543.
2008-02-21 20:35:34 +00:00
Jeff Squyres
5bb1e5151f Suggestions/patches from Brian to make stuff better:
* Include all the stuff that is necessary for running autogen.sh in a
   distribution tarball.
 * Remove from config/Makefile.am's EXTRA_DIST that which is
   automatically included in the tarball in recent versions of
   Automake (i.e., all the m4 files that are acincluded).
 * Make ROMIO's configure script look for something that is actually
   included in the tarball.

Fixes trac:1025.

This commit was SVN r17505.

The following Trac tickets were found above:
  Ticket 1025 --> https://svn.open-mpi.org/trac/ompi/ticket/1025
2008-02-19 01:49:52 +00:00
Jeff Squyres
17ede97ef8 Two fixes to revert some long-ago decisions that seemed like a good
idea at the time, but led to logistical difficulties in importing new
versions of ROMIO: 

* We are effectively eliminating the ROMIO file prefix rule hacks in
  the ROMIO component, which create symlinks from foo.c to
  io_romio_foo.c.  In reality, the file name conflict potential will
  be small.
* Additionally, we are effectively eliminating the ROMIO function
  prefix rule in the ROMIO component.  This is another place where
  there are generally problems with the merge up new versions of ROMIO
  and/or patches from the user community (for their own local builds).
  In reality, since other major MPI implementations provides the same
  exact symbols, it won't cause any practical problems for users.

In return, we make it ''much'' simpler to apply ROMIO patches to Open
MPI.  The problem right now is that any patch will have filenames such
as ad_panfs.c, but Open MPI will only have io_romio_ad_panfs.c, making
things extremely difficult for users.  I believe, for example, that
this would make it possible for LANL to have applied their patches
without too much hassle on either their part or our part.  It will
also make things easier for OMPI when we/they want to do the next
ROMIO upgrade (this was one of the sources of problems on each
upgrade).

This commit was SVN r17436.
2008-02-12 18:55:17 +00:00
Jeff Squyres
213b5d5c6e Per long threads on the mailing list and much confusion discussion
about linkers, have all OPAL, ORTE, and OMPI components '''not'' link
against the OPAL, ORTE, or OMPI libraries.

See ttp://www.open-mpi.org/community/lists/users/2007/10/4220.php for
details (or https://svn.open-mpi.org/trac/ompi/wiki/Linkers for a
better-formatted version of the same info).

This commit was SVN r16968.
2007-12-15 13:32:02 +00:00
Adrian Knoth
037a533752 Reformatted r16691 to OMPI style. Re #733
This commit was SVN r16693.

The following SVN revision numbers were found above:
  r16691 --> open-mpi/ompi@8dca19cb3b
2007-11-08 12:54:48 +00:00
Adrian Knoth
8dca19cb3b upstream patch, provided by Jiri Polach. Re #733
This commit was SVN r16691.
2007-11-08 12:44:10 +00:00
Rich Graham
27a748e7eb change all instances of ompi_free_list_init to ompi_free_list_init_new. Header
and payload data are specified separately at this stage.

This commit was SVN r16633.
2007-11-01 23:38:50 +00:00
Brian Barrett
2b8af283de Add ability to completely turn off MPI one-sided support, so that users
can experiment with using ROMIO directly.

This commit was SVN r15922.
2007-08-18 21:35:51 +00:00
Brian Barrett
9184db7239 Update ROMIO release to the one included with MPICH2-1.0.5p4, tagged in
vendor/romio as mpich2-1.0.5p4.

This commit was SVN r15544.
2007-07-21 22:08:27 +00:00
Brian Barrett
872623a527 Fix situation where we were not propogating error codes from ROMIO
into non-blocking request status fields, so it was never being
relayed to the user

This commit was SVN r15296.
2007-07-05 22:30:42 +00:00
Brian Barrett
b71b2b4b0d Make the aio detection work with cross compiling. The tests no longer
even look at the status code and basically guarantee that the aio
function was never called, so there's really no point in AC_TRY_RUN
over AC_COMPILE_IFELSE...

This commit was SVN r15033.
2007-06-13 03:16:32 +00:00
Brian Barrett
84d1512fba Add the potential for doing some basic error checking on mutexes during
single threaded builds.  In its default configuration, all this does
is ensure that there's at least a good chance of threads building
based on non-threaded development (since the variable names will be
checked).  There is also code to make sure that a "mutex" is never
"double locked" when using the conditional macro mutex operations.
This is off by default because there are a number of places in both
ORTE and OMPI where this alarm spews mega bytes of errors on a
simple test.  So we have some work to do on our path towards
thread support.

Also removed the macro versions of the non-conditional thread locks,
as the only places they were used, the author of the code intended
to use the conditional thread locks.  So now you have upper-case
macros for conditional thread locks and lowercase functions for
non-conditional locks.  Simple, right? :).

This commit was SVN r15011.
2007-06-12 16:25:26 +00:00
Brian Barrett
21e00f6f0c Clean up a couple of configure things:
* Require Autoconf 2.60 or higher and remove some cruft
    required for AC 2.59 or the AC 2.59 / AC 2.60 mix
  * Remove a bunch of now unnecessary AC_SUBST calls
  * Use the libtool-provided variables for the -I and
    library to use when compiling against ltdl

Fixes trac:1000

This commit was SVN r14652.

The following Trac tickets were found above:
  Ticket 1000 --> https://svn.open-mpi.org/trac/ompi/ticket/1000
2007-05-15 04:23:48 +00:00
Sven Stork
a04c8eb39a - Bring over the visibility feature, for a finer symbol export control
via the visibility feature that is provided by some compilers.

  Per default this feature is disabled, to enable it you need to
  configure with --enable-visibility and obviously you need a compiler
  with visibility support. Please refer to the wiki for more information.
  https://svn.open-mpi.org/trac/ompi/wiki/Visibility

This commit was SVN r14582.
2007-05-04 09:03:37 +00:00
Jeff Squyres
82caceda08 A minor change to ROMIO's configure script: make it use exactly the
same "restrict" check as the top-level OMPI configure.ac script so
that it will guarantee to always get the same result.  Therefore, the
#define for restrict will always have the same value in both
opal_config.h and romioconf.h, and we get 7 less warnings (6 in the IO
ROMIO component, 1 in ROMIO itself) when compiling with icc on Linux
(because PAC_C_RESTRICT and AC_C_RESTRICT would get different values
for the "restrict" #define in this case).

This commit was SVN r14387.
2007-04-17 03:10:06 +00:00
Jeff Squyres
51f286d737 Just like r14289 on the ORTE trunk:
Per discussions with Brian and Ralph, make a slight correction in
where components are installed. Use $pkglibdir, not $libdir/openmpi,
so that when compiled in the orte trunk, components are installed to
the right directory (because the component search patch is checking
$pkglibdir).

This commit was SVN r14345.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r14289
2007-04-12 11:19:42 +00:00
Galen Shipman
ebca0bb34e fix for aggregated writes
This commit was SVN r14314.
2007-04-11 22:07:19 +00:00
Jeff Squyres
85d7678350 Revert r14286; it worked for icc, but not for gcc. #$%@#$%
Sorry for configure changes during the day; I totally forgot about
that.  :-(

This commit was SVN r14288.

The following SVN revision numbers were found above:
  r14286 --> open-mpi/ompi@0083eba18e
2007-04-10 15:42:59 +00:00
Jeff Squyres
0083eba18e Comment out the PAC_C_RESTRICT test from ROMIO's configure.in script.
The top-level OMPI configure script already checks for "restrict" and
will issue a #define for it.  PAC_C_RESTRICT would also check for
restrict, but sometimes come up with a different answer than the
top-level OMPI configure script, thereby resulting in conflicting
#define's for "restrict" (e.g., icc 9.0/9.1 on linux x86-64).

So it's easiest just to remove this test from ROMIO's configure.in
script.

This commit was SVN r14286.
2007-04-10 14:50:47 +00:00
Josh Hursey
dadca7da88 Merging in the jjhursey-ft-cr-stable branch (r13912 : HEAD).
This merge adds Checkpoint/Restart support to Open MPI. The initial
frameworks and components support a LAM/MPI-like implementation.

This commit follows the risk assessment presented to the Open MPI core
development group on Feb. 22, 2007.

This commit closes trac:158

More details to follow.

This commit was SVN r14051.

The following SVN revisions from the original message are invalid or
inconsistent and therefore were not cross-referenced:
  r13912

The following Trac tickets were found above:
  Ticket 158 --> https://svn.open-mpi.org/trac/ompi/ticket/158
2007-03-16 23:11:45 +00:00
Brian Barrett
9660bb6ccc These symbols aren't actually created in ROMIO with Open MPI's configure, so
no need to have them in here.

This commit was SVN r13933.
2007-03-05 22:55:17 +00:00
Rainer Keller
0889ebd59f - Eliminate warnings, that PGI-6.2.5 issues with -Minform=inform
This commit was SVN r13840.
2007-02-28 08:36:34 +00:00
Sven Stork
d8a369936e - Fix more symbols that should be exported.
This commit was SVN r13824.
2007-02-27 15:17:17 +00:00
Brian Barrett
a34e67d743 Remove unneeded PARAM_INIT_FILE variable in configure.params files used by
components that use configure.m4 for configuration or are always built. 
The macro has not been needed since moving to configure types other than
configure.stub

Fixes trac:590

This commit was SVN r13031.

The following Trac tickets were found above:
  Ticket 590 --> https://svn.open-mpi.org/trac/ompi/ticket/590
2007-01-08 03:44:22 +00:00
Brian Barrett
6f8b366acb Rename liborte to libopen-rte and libopal to libopen-pal per telecon today
and bug #632.

Refs trac:632

This commit was SVN r12762.

The following Trac tickets were found above:
  Ticket 632 --> https://svn.open-mpi.org/trac/ompi/ticket/632
2006-12-05 18:27:24 +00:00
Jeff Squyres
e02114dcf3 Fixes trac:529.
* Create a new request type: NOOP (described below)
 * For all MPI_*_INIT functions, OBJ_NEW an ompi_request_t and set its
   type to NOOP
 * Ensure that the NOOP requests are OBJ_RELEASE'd when they are done
 * MPI_START looks at the request type; if NOOP, just return success. If
   not, call the PML start() function
 * MPI_STARTALL always pass the entire array of requests back to the PML
   (see next point)
 * Make the PMLs only process PML requests (i.e., ignore/skip anything
   that isn't of type PML -- such as the NOOP requests)
 * Add a little more param error checking in STARTALL

This commit was SVN r12338.

The following Trac tickets were found above:
  Ticket 529 --> https://svn.open-mpi.org/trac/ompi/ticket/529
2006-10-27 12:32:36 +00:00
Jeff Squyres
9ccbab464d Remove unused variable.
This commit was SVN r11918.
2006-10-01 11:51:41 +00:00
Brian Barrett
a546b6834b Only add the ROMIO source directory into DIST_SUBDIRS and SUBDIRS if
the component is configured successfully.  Otherwise, we can end up 
trying to run make in the romio directory without any Makefiles.  This
really only happens on the targets that recurse into DIST_SUBDIRS - ie
dist, maintainer-clean, and distclean

refs trac:411

This commit was SVN r11807.

The following Trac tickets were found above:
  Ticket 411 --> https://svn.open-mpi.org/trac/ompi/ticket/411
2006-09-25 23:51:13 +00:00
Brian Barrett
ddffc8748f * remove unneeded files that were included in the mpich2 tarball
This commit was SVN r11726.
2006-09-20 18:27:28 +00:00
Brian Barrett
d1402cf8f5 * Update ROMIO release to the one included with MPICH2-1.0.4p1, tagged in
vendor/romio as mpich2-1.0.4p1.

This commit was SVN r11715.
2006-09-19 16:13:46 +00:00
Rainer Keller
611f3ba408 - Fix buglet found by Feng Sheng's IO tests;
Correctly initialize the status for non-blocking io.

This commit was SVN r11672.
2006-09-15 12:37:29 +00:00
Jeff Squyres
6173e952a2 Remove these files from SVN; they should not be committed.
This will force everyone to re-autogen.  Sorry!

This commit was SVN r11616.
2006-09-11 22:43:20 +00:00